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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101246628   chlorophyll a-b binding protein 7, chloroplastic 
 sly-r.6   101246628   chlorophyll a-b binding protein 7, chloroplastic 
 sly-m.5   101246628   chlorophyll a-b binding protein 7, chloroplastic 
 ath-u.5   AT1G76570   Chlorophyll A-B binding family protein 
 gma-u.5   100786260   chlorophyll a-b binding protein 4, chloroplastic-like 
 vvi-u.5   100256544   chlorophyll a-b binding protein 7, chloroplastic 
 ppo-u.5   7457192   chlorophyll a-b binding protein 7, chloroplastic 
 mtr-u.5   25482231   chlorophyll a-b binding protein 7, chloroplastic 
 osa-u.5   4346649   chlorophyll a-b binding protein 7, chloroplastic 
 zma-u.5   100274085   uncharacterized LOC100274085 

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Top 50 coexpressed genes to 101246628 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101246628 (sly-u.5 coexpression data)

CoexMap"101246628"


slyLOC101246628 | Entrez gene ID : 101246628    
Species sly ath gma vvi ppo mtr osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 3 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly00196 [list] [network] Photosynthesis - antenna proteins (29 genes)
GO BP
GO:0009768 [list] [network] photosynthesis, light harvesting in photosystem I  (29 genes)  IEA  
GO:0009416 [list] [network] response to light stimulus  (118 genes)  IEA  
GO CC
GO:0016020 [list] [network] membrane  (3085 genes)  IEA  
GO MF
Protein XP_004238472.1 [sequence] [blastp]
XP_069153596.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  plas 2,  cyto 1,  mito 1  (predict for XP_004238472.1)
chlo 4,  plas 2,  cyto 1,  mito 1  (predict for XP_069153596.1)
Subcellular
localization
TargetP
other 5  (predict for XP_004238472.1)
other 5  (predict for XP_069153596.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101246628

.
sly-r.6
for
101246628

.
sly-m.5
for
101246628

.
ath-u.5
for
AT1G76570

.
gma-u.5
for
100786260

.
vvi-u.5
for
100256544

.
ppo-u.5
for
7457192

.
mtr-u.5
for
25482231

.
osa-u.5
for
4346649

.
zma-u.5
for
100274085

.


Ortholog ID: 11525
Species ath gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit nta
Symbol AT1G76570 LOC100786260 LOC101246628 LOC4346649 LOC100274085 LOC103853033 LOC100256544 LOC7457192 LOC25482231 LOC123121097 LOC123103444 LOC123397671 LOC107945370 LOC107952373 LOC106397600 LOC125582544 CHLRE_02g110750v5 LOC8064653 LOC102590605 LOC102612622 LOC107823229
Function* Chlorophyll A-B binding family protein chlorophyll a-b binding protein 4, chloroplastic-like chlorophyll a-b binding protein 7, chloroplastic chlorophyll a-b binding protein 7, chloroplastic uncharacterized LOC100274085 chlorophyll a-b binding protein 7, chloroplastic chlorophyll a-b binding protein 7, chloroplastic chlorophyll a-b binding protein 7, chloroplastic chlorophyll a-b binding protein 7, chloroplastic chlorophyll a-b binding protein 7, chloroplastic chlorophyll a-b binding protein 7, chloroplastic chlorophyll a-b binding protein 7, chloroplastic chlorophyll a-b binding protein 7, chloroplastic chlorophyll a-b binding protein 7, chloroplastic chlorophyll a-b binding protein 7, chloroplastic chlorophyll a-b binding protein 7, chloroplastic-like uncharacterized protein chlorophyll a-b binding protein of LHCII type 1 chlorophyll a-b binding protein of LHCII type 1 chlorophyll a-b binding protein 7, chloroplastic chlorophyll a-b binding protein 7, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 4
gma01240 Biosynthesis of cofactors 2
gma00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
zma01240 Biosynthesis of cofactors 2
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03060 Protein export 2
bra00010 Glycolysis / Gluconeogenesis 2
bra00030 Pentose phosphate pathway 2
bra00051 Fructose and mannose metabolism 2
bra00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00196 Photosynthesis - antenna proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00196 Photosynthesis - antenna proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 2
ghi03018 RNA degradation 2
ghi00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 3
ghi00196 Photosynthesis - antenna proteins 2
ghi00970 Aminoacyl-tRNA biosynthesis 2
ghi00860 Porphyrin metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00196 Photosynthesis - antenna proteins 2
bna04146 Peroxisome 2
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00620 Pyruvate metabolism 3
sbi00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 7
sot00196 Photosynthesis - antenna proteins 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 5
cit01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 843990 100786260 101246628 4346649 100274085 103853033 100256544 7457192 25482231 123121097 123103444 123397671 107945370 107952373 106397600 125582544 5725483 8064653 102590605 102612622 107823229
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