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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   YABBY1a   axial regulator YABBY1a 
 sly-r.6   YABBY1a   axial regulator YABBY1a 
 sly-u.5   YABBY1b   axial regulator YABBY1b 
 ath-u.5   AFO   Plant-specific transcription factor YABBY family protein 
 gma-u.5   100781267   protein YABBY 3 
 gma-u.5   100786175   protein YABBY 7 
 gma-u.5   100794423   protein YABBY 5 
 vvi-u.5   100243667   axial regulator YABBY 1 
 vvi-u.5   100267708   protein YABBY 4 
 ppo-u.5   18096332   axial regulator YABBY 1 
 ppo-u.5   7465527   protein YABBY 4 
 osa-u.5   4330130   protein YABBY 4-like 
 osa-u.5   4336518   protein YABBY 5-like 
 zma-u.5   542128   yabby14 
 zma-u.5   100193442   putative YABBY domain transcription factor family protein 
 zma-u.5   542129   protein YABBY 4 

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Top 50 coexpressed genes to YABBY1a (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to YABBY1a (sly-u.5 coexpression data)

CoexMap"101246760"


slyYABBY1a | Entrez gene ID : 101246760    
Species sly ath gma vvi ppo osa zma sbi nta mtr cre bra cit hvu bdi sot tae bna ghi
Paralog 3 1 3 2 2 2 3 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:1902183 [list] [network] regulation of shoot apical meristem development  (2 genes)  IEA  
GO:2000024 [list] [network] regulation of leaf development  (2 genes)  IEA  
GO:0009944 [list] [network] polarity specification of adaxial/abaxial axis  (3 genes)  IEA  
GO:0010158 [list] [network] abaxial cell fate specification  (10 genes)  IEA  
GO:0045165 [list] [network] cell fate commitment  (19 genes)  IEA  
GO:0010154 [list] [network] fruit development  (38 genes)  IEA  
GO:0007275 [list] [network] multicellular organism development  (199 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2947 genes)  IEA  
GO MF
Protein NP_001353823.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto_nucl 4,  plas 1,  golg_plas 1,  chlo 1,  mito 1,  cysk 1,  chlo_mito 1  (predict for NP_001353823.1)
Subcellular
localization
TargetP
other 3  (predict for NP_001353823.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
YABBY1a

.
sly-r.6
for
YABBY1a

.
sly-u.5
for
YABBY1b

.
ath-u.5
for
AFO

.
gma-u.5
for
100781267

.
gma-u.5
for
100786175

.
gma-u.5
for
100794423

.
vvi-u.5
for
100243667

.
vvi-u.5
for
100267708

.
ppo-u.5
for
18096332

.
ppo-u.5
for
7465527

.
osa-u.5
for
4330130

.
osa-u.5
for
4336518

.
zma-u.5
for
542128

.
zma-u.5
for
100193442

.
zma-u.5
for
542129

.


Ortholog ID: 2893
Species ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo tae tae ghi ghi sbi sbi sot sot cit cit bdi bdi nta nta
Symbol AFO LOC100794423 LOC100781267 YABBY1a YABBY1b LOC4336518 LOC4330130 LOC100193442 LOC542128 LOC103866196 LOC103830131 LOC100267708 LOC100243667 LOC7465527 LOC7488885 LOC123127847 LOC123137614 LOC121211138 LOC107886089 LOC8083323 LOC8075170 LOC102604849 LOC102577797 LOC102622362 LOC102614498 LOC100831851 LOC100845555 LOC107802952 LOC107811927
Function* Plant-specific transcription factor YABBY family protein protein YABBY 5 protein YABBY 3 axial regulator YABBY1a axial regulator YABBY1b protein YABBY 5-like protein YABBY 4-like putative YABBY domain transcription factor family protein yabby14 axial regulator YABBY 1 axial regulator YABBY 1 protein YABBY 4 axial regulator YABBY 1 protein YABBY 4 axial regulator YABBY 1 protein YABBY 4 protein YABBY 4 axial regulator YABBY 1 axial regulator YABBY 1 protein YABBY 5 protein YABBY 4 axial regulator YABBY 1 protein YABBY 4 axial regulator YABBY 1-like axial regulator YABBY 1 protein YABBY 4 protein YABBY 5 axial regulator YABBY 1 axial regulator YABBY 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00040 Pentose and glucuronate interconversions 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00040 Pentose and glucuronate interconversions 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00520 Amino sugar and nucleotide sugar metabolism 2
ghi04016 MAPK signaling pathway - plant 2
ghi00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 819127 100794423 100781267 101246760 101247051 4336518 4330130 100193442 542128 103866196 103830131 100267708 100243667 7465527 7488885 123127847 123137614 121211138 107886089 8083323 8075170 102604849 102577797 102622362 102614498 100831851 100845555 107802952 107811927
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