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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101246789   intermembrane lipid transfer protein VPS13 
 sly-r.6   101246789   intermembrane lipid transfer protein VPS13 
 ath-u.5   AT5G24740   vacuolar protein sorting-associated protein, putative (DUF1162) 
 gma-u.5   100783352   uncharacterized LOC100783352 
 vvi-u.5   100245550   uncharacterized LOC100245550 
 ppo-u.5   18096003   uncharacterized LOC18096003 
 mtr-u.5   11424203   uncharacterized LOC11424203 
 osa-u.5   4344518   intermembrane lipid transfer protein VPS13 
 zma-u.5   100384121   uncharacterized LOC100384121 

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Top 50 coexpressed genes to 101246789 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101246789 (sly-u.5 coexpression data)

CoexMap"101246789"


slyLOC101246789 | Entrez gene ID : 101246789    
Species sly ath gma vvi ppo mtr osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 2 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0045053 [list] [network] protein retention in Golgi apparatus  (2 genes)  IEA  
GO:0006623 [list] [network] protein targeting to vacuole  (13 genes)  IEA  
GO CC
GO:0019898 [list] [network] extrinsic component of membrane  (28 genes)  IEA  
GO MF
Protein XP_010313100.2 [sequence] [blastp]
XP_010313101.2 [sequence] [blastp]
XP_019066556.1 [sequence] [blastp]
XP_025884025.2 [sequence] [blastp]
XP_025884026.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 9,  nucl 1,  mito 1  (predict for XP_010313100.2)
plas 9,  nucl 1,  mito 1  (predict for XP_010313101.2)
plas 8,  nucl 1,  E.R. 1,  pero 1  (predict for XP_019066556.1)
plas 8,  nucl 2  (predict for XP_025884025.2)
plas 7,  nucl 1,  mito 1,  E.R. 1,  pero 1  (predict for XP_025884026.1)
Subcellular
localization
TargetP
other 6,  mito 3  (predict for XP_010313100.2)
other 6,  mito 3  (predict for XP_010313101.2)
other 6  (predict for XP_019066556.1)
other 6  (predict for XP_025884025.2)
other 6  (predict for XP_025884026.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101246789

.
sly-r.6
for
101246789

.
ath-u.5
for
AT5G24740

.
gma-u.5
for
100783352

.
vvi-u.5
for
100245550

.
ppo-u.5
for
18096003

.
mtr-u.5
for
11424203

.
osa-u.5
for
4344518

.
zma-u.5
for
100384121

.


Ortholog ID: 8623
Species ath gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot sot cit bdi nta nta
Symbol AT5G24740 LOC100783352 LOC101246789 LOC4344518 LOC100384121 LOC103874343 LOC100245550 LOC18096003 LOC11424203 LOC123156515 LOC123166530 LOC123408636 LOC107927572 LOC121215884 LOC106447428 LOC106348493 CHLRE_17g727600v5 LOC8066100 LOC102596923 LOC102596584 LOC102613344 LOC100822443 LOC142176002 LOC107821075
Function* vacuolar protein sorting-associated protein, putative (DUF1162) uncharacterized LOC100783352 intermembrane lipid transfer protein VPS13 intermembrane lipid transfer protein VPS13 uncharacterized LOC100384121 uncharacterized LOC103874343 uncharacterized LOC100245550 uncharacterized LOC18096003 uncharacterized LOC11424203 uncharacterized LOC123156515 uncharacterized LOC123166530 uncharacterized LOC123408636 uncharacterized LOC107927572 uncharacterized LOC121215884 uncharacterized LOC106447428 uncharacterized LOC106348493 uncharacterized protein uncharacterized LOC8066100 vacuolar protein sorting-associated protein 13A-like uncharacterized LOC102596584 uncharacterized LOC102613344 putative vacuolar protein sorting-associated protein 13A intermembrane lipid transfer protein VPS13-like uncharacterized LOC107821075
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03440 Homologous recombination 2
ath03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 2
gma04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03082 ATP-dependent chromatin remodeling 2
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03018 RNA degradation 2
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 3
bra03018 RNA degradation 2
bra00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 5
mtr03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
tae04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03082 ATP-dependent chromatin remodeling 2
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03440 Homologous recombination 4
bna03450 Non-homologous end-joining 4
bna03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03440 Homologous recombination 4
bna03450 Non-homologous end-joining 4
bna00564 Glycerophospholipid metabolism 2
bna04070 Phosphatidylinositol signaling system 2
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00010 Glycolysis / Gluconeogenesis 2
nta00030 Pentose phosphate pathway 2
nta00500 Starch and sucrose metabolism 2
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta01200 Carbon metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 832543 100783352 101246789 4344518 100384121 103874343 100245550 18096003 11424203 123156515 123166530 123408636 107927572 121215884 106447428 106348493 5722810 8066100 102596923 102596584 102613344 100822443 142176002 107821075
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