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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101247432   E3 ubiquitin protein ligase RIN2 
 sly-r.6   101247432   E3 ubiquitin protein ligase RIN2 
 ath-u.5   RIN2   RPM1 interacting protein 2 
 ath-u.5   RIN3   RPM1 interacting protein 3 
 gma-u.5   100820578   E3 ubiquitin protein ligase RIN2 
 gma-u.5   100819656   E3 ubiquitin protein ligase RIN2 
 vvi-u.5   100241573   E3 ubiquitin protein ligase RIN2 
 ppo-u.5   7465507   E3 ubiquitin protein ligase RIN2 
 ppo-u.5   7457713   E3 ubiquitin protein ligase RIN2 
 mtr-u.5   11410500   E3 ubiquitin protein ligase RIN2 
 osa-u.5   4343241   E3 ubiquitin protein ligase RIN2 
 zma-u.5   103633177   E3 ubiquitin protein ligase RIN2 
 zma-u.5   100284836   protein binding protein 

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Top 50 coexpressed genes to 101247432 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101247432 (sly-u.5 coexpression data)

CoexMap"101247432"


slyLOC101247432 | Entrez gene ID : 101247432    
Species sly ath gma vvi ppo mtr osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 2 2 2 1 2 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly04141 [list] [network] Protein processing in endoplasmic reticulum (216 genes)
GO BP
GO:0034052 [list] [network] positive regulation of plant-type hypersensitive response  (1 genes)  IEA  
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (283 genes)  IEA  
GO:0016567 [list] [network] protein ubiquitination  (334 genes)  IEA  
GO CC
GO:0000151 [list] [network] ubiquitin ligase complex  (148 genes)  IEA  
GO:0005886 [list] [network] plasma membrane  (899 genes)  IEA  
GO:0005829 [list] [network] cytosol  (916 genes)  IEA  
GO MF
GO:0043130 [list] [network] ubiquitin binding  (53 genes)  IEA  
GO:0061630 [list] [network] ubiquitin protein ligase activity  (194 genes)  IEA  
Protein XP_004240755.1 [sequence] [blastp]
XP_010322004.1 [sequence] [blastp]
XP_010322005.1 [sequence] [blastp]
XP_069155232.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 9,  E.R. 1  (predict for XP_004240755.1)
plas 8,  E.R. 1  (predict for XP_010322004.1)
plas 8,  E.R. 1  (predict for XP_010322005.1)
plas 9,  E.R. 1  (predict for XP_069155232.1)
Subcellular
localization
TargetP
scret 9  (predict for XP_004240755.1)
scret 9  (predict for XP_010322004.1)
scret 9  (predict for XP_010322005.1)
scret 9  (predict for XP_069155232.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101247432

.
sly-r.6
for
101247432

.
ath-u.5
for
RIN2

.
ath-u.5
for
RIN3

.
gma-u.5
for
100820578

.
gma-u.5
for
100819656

.
vvi-u.5
for
100241573

.
ppo-u.5
for
7465507

.
ppo-u.5
for
7457713

.
mtr-u.5
for
11410500

.
osa-u.5
for
4343241

.
zma-u.5
for
103633177

.
zma-u.5
for
100284836

.


Ortholog ID: 6318
Species ath ath gma gma sly osa zma zma bra bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol RIN3 RIN2 LOC100820578 LOC100819656 LOC101247432 LOC4343241 LOC103633177 LOC100284836 LOC103834881 LOC103861538 LOC100241573 LOC7465507 LOC7457713 LOC11410500 LOC123188480 LOC123052629 LOC123426085 LOC107933504 LOC107946848 LOC106411538 LOC106359865 LOC8077439 LOC102592947 LOC102629805 LOC100824161 LOC107760187 LOC107770352
Function* RPM1 interacting protein 3 RPM1 interacting protein 2 E3 ubiquitin protein ligase RIN2 E3 ubiquitin protein ligase RIN2 E3 ubiquitin protein ligase RIN2 E3 ubiquitin protein ligase RIN2 E3 ubiquitin protein ligase RIN2 protein binding protein E3 ubiquitin protein ligase RIN2 E3 ubiquitin protein ligase RIN2 E3 ubiquitin protein ligase RIN2 E3 ubiquitin protein ligase RIN2 E3 ubiquitin protein ligase RIN2 E3 ubiquitin protein ligase RIN2 E3 ubiquitin protein ligase RIN2 E3 ubiquitin protein ligase RIN2 E3 ubiquitin protein ligase RIN2-like E3 ubiquitin protein ligase RIN2 E3 ubiquitin protein ligase RIN2 E3 ubiquitin protein ligase RIN2 E3 ubiquitin protein ligase RIN2-like E3 ubiquitin protein ligase RIN2 E3 ubiquitin protein ligase RIN2 E3 ubiquitin protein ligase RIN2 E3 ubiquitin protein ligase RIN2 E3 ubiquitin protein ligase RIN2 E3 ubiquitin protein ligase RIN2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 2
ath03015 mRNA surveillance pathway 2
ath00562 Inositol phosphate metabolism 2
ath04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 3
ath03015 mRNA surveillance pathway 3
ath04141 Protein processing in endoplasmic reticulum 2
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04148 Efferocytosis 2
gma03015 mRNA surveillance pathway 2
gma03013 Nucleocytoplasmic transport 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04148 Efferocytosis 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04626 Plant-pathogen interaction 2
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04626 Plant-pathogen interaction 2
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 2
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04016 MAPK signaling pathway - plant 2
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04145 Phagosome 4
mtr00190 Oxidative phosphorylation 3
mtr04141 Protein processing in endoplasmic reticulum 2
mtr00071 Fatty acid degradation 2
mtr01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 2
tae01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00620 Pyruvate metabolism 3
tae04141 Protein processing in endoplasmic reticulum 2
tae01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 2
hvu04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 2
nta03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 835219 828626 100820578 100819656 101247432 4343241 103633177 100284836 103834881 103861538 100241573 7465507 7457713 11410500 123188480 123052629 123426085 107933504 107946848 106411538 106359865 8077439 102592947 102629805 100824161 107760187 107770352
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