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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101247453   ribonuclease II, chloroplastic/mitochondrial 
 sly-r.6   101247453   ribonuclease II, chloroplastic/mitochondrial 
 sot-r.1   102601885   ribonuclease II, chloroplastic/mitochondrial 
 nta-r.1   107811133   ribonuclease II, chloroplastic/mitochondrial 
 nta-r.1   107794135   ribonuclease II, chloroplastic/mitochondrial 
 ath-u.5   EMB2730   Ribonuclease II/R family protein 
 gma-u.5   100803243   ribonuclease II, chloroplastic/mitochondrial 
 bra-r.6   103847466   ribonuclease II, chloroplastic/mitochondrial 
 vvi-u.5   100240818   ribonuclease II, chloroplastic/mitochondrial 
 ppo-u.5   7454930   ribonuclease II, chloroplastic/mitochondrial 
 mtr-u.5   25491581   ribonuclease II, chloroplastic/mitochondrial 
 ghi-r.1   107943711   ribonuclease II, chloroplastic/mitochondrial 
 ghi-r.1   107889683   ribonuclease II, chloroplastic/mitochondrial 
 bna-r.1   125605110   ribonuclease II, chloroplastic/mitochondrial 
 bna-r.1   106438827   ribonuclease II, chloroplastic/mitochondrial-like 
 cit-r.1   102620834   ribonuclease II, chloroplastic/mitochondrial 
 osa-u.5   4327498   ribonuclease II, chloroplastic/mitochondrial 
 zma-u.5   103651024   ribonuclease II, chloroplastic/mitochondrial 
 tae-r.2   123188435   ribonuclease II, chloroplastic/mitochondrial 
 tae-r.2   123180145   ribonuclease II, chloroplastic/mitochondrial 
 tae-r.2   123106979   ribonuclease II, chloroplastic/mitochondrial 
 hvu-r.1   123398768   ribonuclease II, chloroplastic/mitochondrial 
 sbi-r.1   8059664   ribonuclease II, chloroplastic/mitochondrial 
 bdi-r.1   100828290   ribonuclease II, chloroplastic/mitochondrial 
 cre-r.1   CHLRE_12g500650v5   uncharacterized protein 

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Top 50 coexpressed genes to 101247453 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101247453 (sly-u.5 coexpression data)

CoexMap"101247453"


slyLOC101247453 | Entrez gene ID : 101247453      
Species sly sot nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 2 1 2 1 1 1 1 1 1 2 2 1 1 1 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0000175 [list] [network] 3'-5'-RNA exonuclease activity  (30 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1208 genes)  IEA  
Protein XP_019071223.1 [sequence] [blastp]
XP_019071225.1 [sequence] [blastp]
XP_019071226.1 [sequence] [blastp]
XP_069144995.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_019071223.1)
chlo 9  (predict for XP_019071225.1)
cyto 6,  chlo 1,  nucl 1,  plas 1,  cysk 1,  golg 1,  chlo_mito 1,  cysk_nucl 1,  nucl_plas 1,  golg_plas 1,  cysk_plas 1  (predict for XP_019071226.1)
cyto 5,  chlo 1,  nucl 1,  plas 1,  pero 1,  cysk 1,  golg 1,  chlo_mito 1,  cysk_nucl 1,  nucl_plas 1,  golg_plas 1,  cysk_plas 1  (predict for XP_069144995.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_019071223.1)
chlo 8  (predict for XP_019071225.1)
other 9  (predict for XP_019071226.1)
other 8  (predict for XP_069144995.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101247453
sly-r.6
for
101247453
sot-r.1
for
102601885
nta-r.1
for
107811133
nta-r.1
for
107794135
ath-u.5
for
EMB2730
gma-u.5
for
100803243
bra-r.6
for
103847466
vvi-u.5
for
100240818
ppo-u.5
for
7454930
mtr-u.5
for
25491581
ghi-r.1
for
107943711
ghi-r.1
for
107889683
bna-r.1
for
125605110
bna-r.1
for
106438827
cit-r.1
for
102620834
osa-u.5
for
4327498
zma-u.5
for
103651024
tae-r.2
for
123188435
tae-r.2
for
123180145
tae-r.2
for
123106979
hvu-r.1
for
123398768
sbi-r.1
for
8059664
bdi-r.1
for
100828290
cre-r.1
for
CHLRE_12g500650v5


Ortholog ID: 10926
Species sly sot nta nta ath gma bra vvi ppo mtr ghi ghi bna bna cit osa zma tae tae tae hvu sbi bdi cre
Symbol LOC101247453 LOC102601885 LOC107811133 LOC107794135 EMB2730 LOC100803243 LOC103847466 LOC100240818 LOC7454930 LOC25491581 LOC107943711 LOC107889683 LOC125605110 LOC106438827 LOC102620834 LOC4327498 LOC103651024 LOC123188435 LOC123180145 LOC123106979 LOC123398768 LOC8059664 LOC100828290 CHLRE_12g500650v5
Function* ribonuclease II, chloroplastic/mitochondrial ribonuclease II, chloroplastic/mitochondrial ribonuclease II, chloroplastic/mitochondrial ribonuclease II, chloroplastic/mitochondrial Ribonuclease II/R family protein ribonuclease II, chloroplastic/mitochondrial ribonuclease II, chloroplastic/mitochondrial ribonuclease II, chloroplastic/mitochondrial ribonuclease II, chloroplastic/mitochondrial ribonuclease II, chloroplastic/mitochondrial ribonuclease II, chloroplastic/mitochondrial ribonuclease II, chloroplastic/mitochondrial ribonuclease II, chloroplastic/mitochondrial ribonuclease II, chloroplastic/mitochondrial-like ribonuclease II, chloroplastic/mitochondrial ribonuclease II, chloroplastic/mitochondrial ribonuclease II, chloroplastic/mitochondrial ribonuclease II, chloroplastic/mitochondrial ribonuclease II, chloroplastic/mitochondrial ribonuclease II, chloroplastic/mitochondrial ribonuclease II, chloroplastic/mitochondrial ribonuclease II, chloroplastic/mitochondrial ribonuclease II, chloroplastic/mitochondrial uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 3
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 3
bna00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 3
bna00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
tae04141 Protein processing in endoplasmic reticulum 3
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 3
hvu03010 Ribosome 2
hvu00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00970 Aminoacyl-tRNA biosynthesis 5
cre01230 Biosynthesis of amino acids 4
cre00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101247453 102601885 107811133 107794135 830864 100803243 103847466 100240818 7454930 25491581 107943711 107889683 125605110 106438827 102620834 4327498 103651024 123188435 123180145 123106979 123398768 8059664 100828290 5716382
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