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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101247538   ribose-phosphate pyrophosphokinase 4-like 
 sly-r.6   101247538   ribose-phosphate pyrophosphokinase 4-like 
 sly-u.5   101259040   ribose-phosphate pyrophosphokinase 4 
 sly-u.5   101252123   ribose-phosphate pyrophosphokinase 4 
 sot-r.1   102601048   ribose-phosphate pyrophosphokinase 4 
 sot-r.1   102596688   ribose-phosphate pyrophosphokinase 4-like 
 sot-r.1   102598562   ribose-phosphate pyrophosphokinase 4 
 nta-r.1   107764845   ribose-phosphate pyrophosphokinase 4 
 nta-r.1   107788311   ribose-phosphate pyrophosphokinase 4 
 nta-r.1   107782855   ribose-phosphate pyrophosphokinase 4 
 ath-u.5   AT2G42910   Phosphoribosyltransferase family protein 
 ath-u.5   PRS3   phosphoribosyl pyrophosphate (PRPP) synthase 3 
 gma-u.5   100814236   ribose-phosphate pyrophosphokinase 4 
 gma-u.5   100812868   ribose-phosphate pyrophosphokinase 4 
 gma-u.5   100799836   ribose-phosphate pyrophosphokinase 4 
 bra-r.6   103858036   ribose-phosphate pyrophosphokinase 4 
 bra-r.6   103866678   ribose-phosphate pyrophosphokinase 4 
 bra-r.6   103871852   ribose-phosphate pyrophosphokinase 3, chloroplastic 
 vvi-u.5   100250562   ribose-phosphate pyrophosphokinase 4 
 vvi-u.5   100259732   ribose-phosphate pyrophosphokinase 4 
 ppo-u.5   7460761   ribose-phosphate pyrophosphokinase 4 
 ppo-u.5   7464799   ribose-phosphate pyrophosphokinase 4 
 ppo-u.5   7468738   ribose-phosphate pyrophosphokinase 4 
 mtr-u.5   120579729   ribose-phosphate pyrophosphokinase 4 
 mtr-u.5   11426650   ribose-phosphate pyrophosphokinase 4 
 mtr-u.5   11407878   ribose-phosphate pyrophosphokinase 4 
 ghi-r.1   107959722   ribose-phosphate pyrophosphokinase 4 
 ghi-r.1   107959665   ribose-phosphate pyrophosphokinase 4 
 ghi-r.1   107933395   ribose-phosphate pyrophosphokinase 4 
 bna-r.1   106355123   ribose-phosphate pyrophosphokinase 3, chloroplastic-like 
 bna-r.1   106433957   ribose-phosphate pyrophosphokinase 4 
 bna-r.1   106388296   ribose-phosphate pyrophosphokinase 4 
 cit-r.1   102627090   ribose-phosphate pyrophosphokinase 4 
 cit-r.1   102612584   ribose-phosphate pyrophosphokinase 4 
 osa-u.5   4330515   ribose-phosphate pyrophosphokinase 4-like 
 osa-u.5   4324718   ribose-phosphate pyrophosphokinase 3, chloroplastic-like 
 zma-u.5   100381520   uncharacterized LOC100381520 
 zma-u.5   100280644   ribose-phosphate pyrophosphokinase 4 
 zma-u.5   100277120   uncharacterized LOC100277120 
 tae-r.2   123062026   ribose-phosphate pyrophosphokinase 3, chloroplastic 
 tae-r.2   123079138   ribose-phosphate pyrophosphokinase 3, chloroplastic 
 tae-r.2   123128181   ribose-phosphate pyrophosphokinase 4 
 hvu-r.1   123444314   ribose-phosphate pyrophosphokinase 3, chloroplastic-like 
 hvu-r.1   123402152   ribose-phosphate pyrophosphokinase 4 
 sbi-r.1   8059203   ribose-phosphate pyrophosphokinase 3, chloroplastic 
 bdi-r.1   100834502   ribose-phosphate pyrophosphokinase 4 
 bdi-r.1   100831433   ribose-phosphate pyrophosphokinase 3, chloroplastic 
 cre-r.1   CHLRE_09g394550v5   uncharacterized protein 

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Top 50 coexpressed genes to 101247538 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101247538 (sly-u.5 coexpression data)

CoexMap"101247538"


slyLOC101247538 | Entrez gene ID : 101247538      
Species sly sot nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 4 3 3 2 3 3 2 3 3 3 3 2 2 3 3 2 1 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006015 [list] [network] 5-phosphoribose 1-diphosphate biosynthetic process  (5 genes)  IEA  
GO:0006164 [list] [network] purine nucleotide biosynthetic process  (64 genes)  IEA  
GO CC
GO:0002189 [list] [network] ribose phosphate diphosphokinase complex  (5 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (5127 genes)  IEA  
GO MF
GO:0004749 [list] [network] ribose phosphate diphosphokinase activity  (5 genes)  IEA  
GO:0000287 [list] [network] magnesium ion binding  (121 genes)  IEA  
Protein XP_004243203.1 [sequence] [blastp]
XP_010323627.1 [sequence] [blastp]
XP_010323628.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  cyto_nucl 4,  nucl 2,  E.R. 1  (predict for XP_004243203.1)
cyto 5,  cyto_nucl 4,  E.R. 2,  nucl 1  (predict for XP_010323627.1)
cyto 6,  cyto_nucl 4,  nucl 1,  E.R. 1  (predict for XP_010323628.1)
Subcellular
localization
TargetP
other 7  (predict for XP_004243203.1)
other 7  (predict for XP_010323627.1)
other 7  (predict for XP_010323628.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101247538
sly-r.6
for
101247538
sly-u.5
for
101259040
sly-u.5
for
101252123
sot-r.1
for
102601048
sot-r.1
for
102596688
sot-r.1
for
102598562
nta-r.1
for
107764845
nta-r.1
for
107788311
nta-r.1
for
107782855
ath-u.5
for
AT2G42910
ath-u.5
for
PRS3
gma-u.5
for
100814236
gma-u.5
for
100812868
gma-u.5
for
100799836
bra-r.6
for
103858036
bra-r.6
for
103866678
bra-r.6
for
103871852
vvi-u.5
for
100250562
vvi-u.5
for
100259732
ppo-u.5
for
7460761
ppo-u.5
for
7464799
ppo-u.5
for
7468738
mtr-u.5
for
120579729
mtr-u.5
for
11426650
mtr-u.5
for
11407878
ghi-r.1
for
107959722
ghi-r.1
for
107959665
ghi-r.1
for
107933395
bna-r.1
for
106355123
bna-r.1
for
106433957
bna-r.1
for
106388296
cit-r.1
for
102627090
cit-r.1
for
102612584
osa-u.5
for
4330515
osa-u.5
for
4324718
zma-u.5
for
100381520
zma-u.5
for
100280644
zma-u.5
for
100277120
tae-r.2
for
123062026
tae-r.2
for
123079138
tae-r.2
for
123128181
hvu-r.1
for
123444314
hvu-r.1
for
123402152
sbi-r.1
for
8059203
bdi-r.1
for
100834502
bdi-r.1
for
100831433
cre-r.1
for
CHLRE_09g394550v5


Ortholog ID: 2713
Species sly sly sly sot sot sot nta nta nta ath ath gma gma gma bra bra bra vvi vvi ppo ppo ppo mtr mtr mtr ghi ghi ghi bna bna bna cit cit osa osa zma zma zma tae tae tae hvu hvu sbi bdi bdi cre
Symbol LOC101247538 LOC101259040 LOC101252123 LOC102601048 LOC102596688 LOC102598562 LOC107764845 LOC107788311 LOC107826214 AT2G42910 PRS3 LOC100812868 LOC100799836 LOC100783631 LOC103858036 LOC103866678 LOC103871852 LOC100250562 LOC100259732 LOC7460761 LOC7464799 LOC7468738 LOC120579729 LOC11426650 LOC11407878 LOC107959722 LOC107959665 LOC107898659 LOC106433957 LOC106388296 LOC106350237 LOC102627090 LOC102612584 LOC4330515 LOC4324718 LOC100381520 LOC100280644 LOC100277120 LOC123062026 LOC123070730 LOC123145281 LOC123444314 LOC123402152 LOC8059203 LOC100834502 LOC100831433 CHLRE_09g394550v5
Function* ribose-phosphate pyrophosphokinase 4-like ribose-phosphate pyrophosphokinase 4 ribose-phosphate pyrophosphokinase 4 ribose-phosphate pyrophosphokinase 4 ribose-phosphate pyrophosphokinase 4-like ribose-phosphate pyrophosphokinase 4 ribose-phosphate pyrophosphokinase 4 ribose-phosphate pyrophosphokinase 4 ribose-phosphate pyrophosphokinase 4 Phosphoribosyltransferase family protein phosphoribosyl pyrophosphate (PRPP) synthase 3 ribose-phosphate pyrophosphokinase 4 ribose-phosphate pyrophosphokinase 4 ribose-phosphate pyrophosphokinase 4 ribose-phosphate pyrophosphokinase 4 ribose-phosphate pyrophosphokinase 4 ribose-phosphate pyrophosphokinase 3, chloroplastic ribose-phosphate pyrophosphokinase 4 ribose-phosphate pyrophosphokinase 4 ribose-phosphate pyrophosphokinase 4 ribose-phosphate pyrophosphokinase 4 ribose-phosphate pyrophosphokinase 4 ribose-phosphate pyrophosphokinase 4 ribose-phosphate pyrophosphokinase 4 ribose-phosphate pyrophosphokinase 4 ribose-phosphate pyrophosphokinase 4 ribose-phosphate pyrophosphokinase 4 ribose-phosphate pyrophosphokinase 4 ribose-phosphate pyrophosphokinase 4 ribose-phosphate pyrophosphokinase 4 ribose-phosphate pyrophosphokinase 3, chloroplastic ribose-phosphate pyrophosphokinase 4 ribose-phosphate pyrophosphokinase 4 ribose-phosphate pyrophosphokinase 4-like ribose-phosphate pyrophosphokinase 3, chloroplastic-like uncharacterized LOC100381520 ribose-phosphate pyrophosphokinase 4 uncharacterized LOC100277120 ribose-phosphate pyrophosphokinase 3, chloroplastic ribose-phosphate pyrophosphokinase 3, chloroplastic ribose-phosphate pyrophosphokinase 4 ribose-phosphate pyrophosphokinase 3, chloroplastic-like ribose-phosphate pyrophosphokinase 4 ribose-phosphate pyrophosphokinase 3, chloroplastic ribose-phosphate pyrophosphokinase 4 ribose-phosphate pyrophosphokinase 3, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 2
sly03082 ATP-dependent chromatin remodeling 2
sly03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00270 Cysteine and methionine metabolism 3
sly00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 3
sot00190 Oxidative phosphorylation 3
sot04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00270 Cysteine and methionine metabolism 2
nta00330 Arginine and proline metabolism 2
nta00480 Glutathione metabolism 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00760 Nicotinate and nicotinamide metabolism 8
nta01240 Biosynthesis of cofactors 8
nta00010 Glycolysis / Gluconeogenesis 4
nta00250 Alanine, aspartate and glutamate metabolism 4
nta00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01230 Biosynthesis of amino acids 10
ath00400 Phenylalanine, tyrosine and tryptophan biosynthesis 8
ath00260 Glycine, serine and threonine metabolism 4
ath01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 4
gma00061 Fatty acid biosynthesis 4
gma01212 Fatty acid metabolism 4
gma01240 Biosynthesis of cofactors 4
gma00620 Pyruvate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 6
gma01230 Biosynthesis of amino acids 6
gma00061 Fatty acid biosynthesis 4
gma00620 Pyruvate metabolism 4
gma01212 Fatty acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01240 Biosynthesis of cofactors 4
bra03010 Ribosome 3
bra00240 Pyrimidine metabolism 3
bra00250 Alanine, aspartate and glutamate metabolism 3
bra00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01240 Biosynthesis of cofactors 3
bra00230 Purine metabolism 2
bra04626 Plant-pathogen interaction 2
bra03013 Nucleocytoplasmic transport 2
bra00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01230 Biosynthesis of amino acids 11
bra00400 Phenylalanine, tyrosine and tryptophan biosynthesis 8
bra00260 Glycine, serine and threonine metabolism 5
bra00270 Cysteine and methionine metabolism 3
bra01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01240 Biosynthesis of cofactors 6
vvi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 5
mtr03050 Proteasome 3
mtr03013 Nucleocytoplasmic transport 3
mtr03250 Viral life cycle - HIV-1 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 5
mtr03013 Nucleocytoplasmic transport 4
mtr03008 Ribosome biogenesis in eukaryotes 3
mtr03250 Viral life cycle - HIV-1 3
mtr01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01200 Carbon metabolism 13
ghi00010 Glycolysis / Gluconeogenesis 11
ghi00710 Carbon fixation by Calvin cycle 10
ghi01230 Biosynthesis of amino acids 7
ghi00030 Pentose phosphate pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01200 Carbon metabolism 13
ghi00010 Glycolysis / Gluconeogenesis 11
ghi00710 Carbon fixation by Calvin cycle 10
ghi01230 Biosynthesis of amino acids 7
ghi00030 Pentose phosphate pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03410 Base excision repair 3
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00053 Ascorbate and aldarate metabolism 2
ghi00071 Fatty acid degradation 2
ghi00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00230 Purine metabolism 3
bna00740 Riboflavin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00230 Purine metabolism 3
bna00740 Riboflavin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00260 Glycine, serine and threonine metabolism 6
bna00400 Phenylalanine, tyrosine and tryptophan biosynthesis 6
bna01230 Biosynthesis of amino acids 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 3
cit00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04814 Motor proteins 4
cit00230 Purine metabolism 3
cit01232 Nucleotide metabolism 3
cit04145 Phagosome 3
cit04517 IgSF CAM signaling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00270 Cysteine and methionine metabolism 7
osa00999 Biosynthesis of various plant secondary metabolites 2
osa01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00400 Phenylalanine, tyrosine and tryptophan biosynthesis 11
osa01230 Biosynthesis of amino acids 11
osa00260 Glycine, serine and threonine metabolism 2
osa00360 Phenylalanine metabolism 2
osa00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01200 Carbon metabolism 8
zma00270 Cysteine and methionine metabolism 6
zma00630 Glyoxylate and dicarboxylate metabolism 6
zma00999 Biosynthesis of various plant secondary metabolites 4
zma00710 Carbon fixation by Calvin cycle 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01200 Carbon metabolism 7
zma00630 Glyoxylate and dicarboxylate metabolism 5
zma00030 Pentose phosphate pathway 2
zma00710 Carbon fixation by Calvin cycle 2
zma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01230 Biosynthesis of amino acids 14
zma00400 Phenylalanine, tyrosine and tryptophan biosynthesis 10
zma01200 Carbon metabolism 5
zma00010 Glycolysis / Gluconeogenesis 3
zma00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01240 Biosynthesis of cofactors 4
tae00400 Phenylalanine, tyrosine and tryptophan biosynthesis 4
tae01230 Biosynthesis of amino acids 4
tae00760 Nicotinate and nicotinamide metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00400 Phenylalanine, tyrosine and tryptophan biosynthesis 4
tae01230 Biosynthesis of amino acids 4
tae00760 Nicotinate and nicotinamide metabolism 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01200 Carbon metabolism 4
tae00270 Cysteine and methionine metabolism 3
tae00030 Pentose phosphate pathway 3
tae00710 Carbon fixation by Calvin cycle 3
tae01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00400 Phenylalanine, tyrosine and tryptophan biosynthesis 5
hvu01230 Biosynthesis of amino acids 5
hvu00260 Glycine, serine and threonine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 3
hvu01210 2-Oxocarboxylic acid metabolism 3
hvu00270 Cysteine and methionine metabolism 2
hvu00290 Valine, leucine and isoleucine biosynthesis 2
hvu00770 Pantothenate and CoA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 9
sbi01230 Biosynthesis of amino acids 9
sbi00941 Flavonoid biosynthesis 2
sbi00260 Glycine, serine and threonine metabolism 2
sbi00350 Tyrosine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00270 Cysteine and methionine metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01230 Biosynthesis of amino acids 8
bdi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 7
bdi00260 Glycine, serine and threonine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 4
cre00230 Purine metabolism 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101247538 101259040 101252123 102601048 102596688 102598562 107764845 107788311 107826214 818892 837613 100812868 100799836 100783631 103858036 103866678 103871852 100250562 100259732 7460761 7464799 7468738 120579729 11426650 11407878 107959722 107959665 107898659 106433957 106388296 106350237 102627090 102612584 4330515 4324718 100381520 100280644 100277120 123062026 123070730 123145281 123444314 123402152 8059203 100834502 100831433 5720136
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