ATTED-II : GeneCoexpression result

Species	Gene	Description
sly-u.5	101247546	probable polygalacturonase
sly-r.6	101247546	probable polygalacturonase
sly-u.5	101258597	probable polygalacturonase
sly-u.5	101265204	probable polygalacturonase
ath-u.5	AT2G23900	Pectin lyase-like superfamily protein
ath-u.5	AT3G61490	Pectin lyase-like superfamily protein
gma-u.5	100818998	probable polygalacturonase
gma-u.5	100816232	probable polygalacturonase
vvi-u.5	100255362	probable polygalacturonase
ppo-u.5	7497216	probable polygalacturonase
ppo-u.5	7497800	probable polygalacturonase
osa-u.5	4331458	probable polygalacturonase
osa-u.5	4339868	probable polygalacturonase
zma-u.5	100284797	glycoside hydrolase, family 28
zma-u.5	100284735	glycoside hydrolase, family 28

Annotation

functional annotation

KEGG

GO BP

GO:0005975 [list] [network] carbohydrate metabolic process

(703 genes)

IEA

GO CC

GO MF

GO:0004650 [list] [network] polygalacturonase activity

(56 genes)

IEA

Protein

XP_004245570.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 2, cyto 2, vacu 2, mito 1, plas 1, cyto_nucl 1, mito_plas 1

(predict for XP_004245570.1)

Subcellular
localization
TargetP

scret 8

(predict for XP_004245570.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sly-u.5 for 101247546	sly-r.6 for 101247546	sly-u.5 for 101258597	sly-u.5 for 101265204	ath-u.5 for AT2G23900	ath-u.5 for AT3G61490	gma-u.5 for 100818998	gma-u.5 for 100816232	vvi-u.5 for 100255362	ppo-u.5 for 7497216	ppo-u.5 for 7497800	osa-u.5 for 4331458	osa-u.5 for 4339868	zma-u.5 for 100284797	zma-u.5 for 100284735

Ortholog

Ortholog ID: 930

Species

sly

sot

nta

ath

gma

bra

vvi

ppo

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

probable polygalacturonase

putative polygalacturonase

Pectin lyase-like superfamily protein

probable polygalacturonase

glycoside hydrolase, family 28

probable polygalacturonase

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00073	Cutin, suberine and wax biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00940	Phenylpropanoid biosynthesis	7
sot00360	Phenylalanine metabolism	3
sot00941	Flavonoid biosynthesis	2
sot00945	Stilbenoid, diarylheptanoid and gingerol biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta02010	ABC transporters	2
nta04981	Folate transport and metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta02010	ABC transporters	2
nta04981	Folate transport and metabolism	2
nta00511	Other glycan degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00040	Pentose and glucuronate interconversions	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00061	Fatty acid biosynthesis	3
bra01212	Fatty acid metabolism	3
bra00620	Pyruvate metabolism	3
bra00640	Propanoate metabolism	3
bra01200	Carbon metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00051	Fructose and mannose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00510	N-Glycan biosynthesis	2
ghi00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00940	Phenylpropanoid biosynthesis	2
bna00040	Pentose and glucuronate interconversions	2
bna00053	Ascorbate and aldarate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00940	Phenylpropanoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00520	Amino sugar and nucleotide sugar metabolism	3
zma00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	2
tae03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00380	Tryptophan metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00040	Pentose and glucuronate interconversions	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04814	Motor proteins	2

Expression

Expression pattern

Entrez Gene ID^*

101265204

101247546

102584705

102579922

107770152

107824442

816922

828450

100787980

100794916

103873101

103861130

100255362

100852885

7497216

7497800

107923473

121223705

106446613

102617191

127900536

4339868

4331458

100284735

100284797

123098989

123088500

123449865

123413604

8066875

8085717

100836905

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 101247546 (sly-u.5 coexpression data)

Top 50 enrichment test to 101247546 (sly-u.5 coexpression data)


Species	sly	ath	gma	vvi	ppo	osa	zma	bdi	mtr	bra	hvu	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	4	2	2	1	2	2	2	0	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 101247546 (sly-u.5 coexpression data)

Top 50 enrichment test to 101247546 (sly-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**