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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101248140   protein CURVATURE THYLAKOID 1A, chloroplastic 
 sly-r.6   101248140   protein CURVATURE THYLAKOID 1A, chloroplastic 
 sly-u.5   101260274   protein CURVATURE THYLAKOID 1A, chloroplastic-like 
 sot-r.1   102596366   protein CURVATURE THYLAKOID 1A, chloroplastic-like 
 sot-r.1   102595149   protein CURVATURE THYLAKOID 1A, chloroplastic-like 
 nta-r.1   107808435   protein CURVATURE THYLAKOID 1A, chloroplastic 
 nta-r.1   107820363   protein CURVATURE THYLAKOID 1A, chloroplastic 
 ath-u.5   AT4G01150   CURVATURE THYLAKOID 1A-like protein 
 gma-u.5   100775367   protein CURVATURE THYLAKOID 1A, chloroplastic 
 gma-u.5   100305578   CAAD domain-containing protein 
 bra-r.6   103853325   protein CURVATURE THYLAKOID 1A, chloroplastic 
 bra-r.6   103836875   protein CURVATURE THYLAKOID 1A, chloroplastic 
 bra-r.6   117132370   protein CURVATURE THYLAKOID 1A, chloroplastic 
 vvi-u.5   100246662   protein CURVATURE THYLAKOID 1A, chloroplastic 
 vvi-u.5   100253425   protein CURVATURE THYLAKOID 1A, chloroplastic 
 ppo-u.5   7492752   protein CURVATURE THYLAKOID 1A, chloroplastic 
 ppo-u.5   7457377   protein CURVATURE THYLAKOID 1A, chloroplastic 
 mtr-u.5   25499725   protein CURVATURE THYLAKOID 1A, chloroplastic 
 ghi-r.1   107954513   protein CURVATURE THYLAKOID 1A, chloroplastic 
 ghi-r.1   107909770   protein CURVATURE THYLAKOID 1A, chloroplastic 
 ghi-r.1   107924157   protein CURVATURE THYLAKOID 1A, chloroplastic 
 bna-r.1   125586324   protein CURVATURE THYLAKOID 1A, chloroplastic-like 
 bna-r.1   125593226   protein CURVATURE THYLAKOID 1A, chloroplastic-like 
 bna-r.1   106365648   protein CURVATURE THYLAKOID 1A, chloroplastic 
 cit-r.1   102606616   protein CURVATURE THYLAKOID 1A, chloroplastic 
 cit-r.1   127901041   protein CURVATURE THYLAKOID 1A, chloroplastic-like 
 osa-u.5   4345635   protein CURVATURE THYLAKOID 1A, chloroplastic 
 osa-u.5   4330625   protein CURVATURE THYLAKOID 1A, chloroplastic 
 osa-u.5   4340704   protein CURVATURE THYLAKOID 1A, chloroplastic 
 zma-u.5   100282910   Threonine endopeptidase 
 zma-u.5   100273445   Threonine endopeptidase 
 zma-u.5   100276013   uncharacterized LOC100276013 
 tae-r.2   123170283   protein CURVATURE THYLAKOID 1A, chloroplastic 
 tae-r.2   123141756   protein CURVATURE THYLAKOID 1A, chloroplastic 
 tae-r.2   123138141   protein CURVATURE THYLAKOID 1A, chloroplastic 
 hvu-r.1   123412295   protein CURVATURE THYLAKOID 1A, chloroplastic-like 
 hvu-r.1   123402356   protein CURVATURE THYLAKOID 1A, chloroplastic 
 sbi-r.1   8065769   protein CURVATURE THYLAKOID 1A, chloroplastic 
 bdi-r.1   100837661   protein CURVATURE THYLAKOID 1A, chloroplastic 
 cre-r.1   CHLRE_05g233950v5   uncharacterized protein 

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Top 50 coexpressed genes to 101248140 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101248140 (sly-u.5 coexpression data)

CoexMap"101248140"


slyLOC101248140 | Entrez gene ID : 101248140      
Species sly sot nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 3 2 2 1 2 3 2 2 1 3 3 2 3 3 3 2 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0009535 [list] [network] chloroplast thylakoid membrane  (117 genes)  IEA  
GO:0009579 [list] [network] thylakoid  (181 genes)  IEA  
GO MF
Protein XP_004229969.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_004229969.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_004229969.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101248140
sly-r.6
for
101248140
sly-u.5
for
101260274
sot-r.1
for
102596366
sot-r.1
for
102595149
nta-r.1
for
107808435
nta-r.1
for
107820363
ath-u.5
for
AT4G01150
gma-u.5
for
100775367
gma-u.5
for
100305578
bra-r.6
for
103853325
bra-r.6
for
103836875
bra-r.6
for
117132370
vvi-u.5
for
100246662
vvi-u.5
for
100253425
ppo-u.5
for
7492752
ppo-u.5
for
7457377
mtr-u.5
for
25499725
ghi-r.1
for
107954513
ghi-r.1
for
107909770
ghi-r.1
for
107924157
bna-r.1
for
125586324
bna-r.1
for
125593226
bna-r.1
for
106365648
cit-r.1
for
102606616
cit-r.1
for
127901041
osa-u.5
for
4345635
osa-u.5
for
4330625
osa-u.5
for
4340704
zma-u.5
for
100282910
zma-u.5
for
100273445
zma-u.5
for
100276013
tae-r.2
for
123170283
tae-r.2
for
123141756
tae-r.2
for
123138141
hvu-r.1
for
123412295
hvu-r.1
for
123402356
sbi-r.1
for
8065769
bdi-r.1
for
100837661
cre-r.1
for
CHLRE_05g233950v5


Ortholog ID: 3483
Species sly sly sot sot nta nta ath gma gma bra bra bra vvi vvi ppo ppo mtr ghi ghi ghi bna bna bna cit cit osa osa osa zma zma zma tae tae tae hvu hvu sbi bdi cre
Symbol LOC101248140 LOC101260274 LOC102596366 LOC102595149 LOC107808435 LOC107820363 AT4G01150 LOC100775367 LOC100305578 LOC103853325 LOC103836875 LOC117132370 LOC100246662 LOC100253425 LOC7492752 LOC7457377 LOC25499725 LOC107954513 LOC107955260 LOC107900934 LOC125593226 LOC106398836 LOC106388745 LOC102606616 LOC127901041 LOC4345635 LOC4330625 LOC4340704 LOC100282910 LOC100273445 LOC100276013 LOC123138141 LOC123160120 LOC123150665 LOC123412295 LOC123402356 LOC8065769 LOC100837661 CHLRE_05g233950v5
Function* protein CURVATURE THYLAKOID 1A, chloroplastic protein CURVATURE THYLAKOID 1A, chloroplastic-like protein CURVATURE THYLAKOID 1A, chloroplastic-like protein CURVATURE THYLAKOID 1A, chloroplastic-like protein CURVATURE THYLAKOID 1A, chloroplastic protein CURVATURE THYLAKOID 1A, chloroplastic CURVATURE THYLAKOID 1A-like protein protein CURVATURE THYLAKOID 1A, chloroplastic CAAD domain-containing protein protein CURVATURE THYLAKOID 1A, chloroplastic protein CURVATURE THYLAKOID 1A, chloroplastic protein CURVATURE THYLAKOID 1A, chloroplastic protein CURVATURE THYLAKOID 1A, chloroplastic protein CURVATURE THYLAKOID 1A, chloroplastic protein CURVATURE THYLAKOID 1A, chloroplastic protein CURVATURE THYLAKOID 1A, chloroplastic protein CURVATURE THYLAKOID 1A, chloroplastic protein CURVATURE THYLAKOID 1A, chloroplastic protein CURVATURE THYLAKOID 1A, chloroplastic protein CURVATURE THYLAKOID 1A, chloroplastic protein CURVATURE THYLAKOID 1A, chloroplastic-like protein CURVATURE THYLAKOID 1A, chloroplastic protein CURVATURE THYLAKOID 1A, chloroplastic protein CURVATURE THYLAKOID 1A, chloroplastic protein CURVATURE THYLAKOID 1A, chloroplastic-like protein CURVATURE THYLAKOID 1A, chloroplastic protein CURVATURE THYLAKOID 1A, chloroplastic protein CURVATURE THYLAKOID 1A, chloroplastic Threonine endopeptidase Threonine endopeptidase uncharacterized LOC100276013 protein CURVATURE THYLAKOID 1A, chloroplastic protein CURVATURE THYLAKOID 1A, chloroplastic protein CURVATURE THYLAKOID 1A, chloroplastic protein CURVATURE THYLAKOID 1A, chloroplastic-like protein CURVATURE THYLAKOID 1A, chloroplastic protein CURVATURE THYLAKOID 1A, chloroplastic protein CURVATURE THYLAKOID 1A, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 14
sly00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 12
sly01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 11
sot00010 Glycolysis / Gluconeogenesis 2
sot00710 Carbon fixation by Calvin cycle 2
sot01200 Carbon metabolism 2
sot01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 6
sot00195 Photosynthesis 4
sot00710 Carbon fixation by Calvin cycle 2
sot01200 Carbon metabolism 2
sot01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00620 Pyruvate metabolism 2
nta03010 Ribosome 2
nta00860 Porphyrin metabolism 2
nta00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
nta00195 Photosynthesis 2
nta00860 Porphyrin metabolism 2
nta00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 13
ath00196 Photosynthesis - antenna proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 8
gma00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 11
gma00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00906 Carotenoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 10
bra00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 7
bra00196 Photosynthesis - antenna proteins 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 9
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 12
ppo00196 Photosynthesis - antenna proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 5
ppo00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00195 Photosynthesis 12
mtr00196 Photosynthesis - antenna proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01200 Carbon metabolism 12
ghi00710 Carbon fixation by Calvin cycle 10
ghi00630 Glyoxylate and dicarboxylate metabolism 6
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01200 Carbon metabolism 12
ghi00710 Carbon fixation by Calvin cycle 10
ghi00630 Glyoxylate and dicarboxylate metabolism 6
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 9
cit00196 Photosynthesis - antenna proteins 2
cit00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 9
cit00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00195 Photosynthesis 8
osa00196 Photosynthesis - antenna proteins 2
osa00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00195 Photosynthesis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00710 Carbon fixation by Calvin cycle 6
zma01200 Carbon metabolism 6
zma00010 Glycolysis / Gluconeogenesis 2
zma00030 Pentose phosphate pathway 2
zma00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 9
zma00710 Carbon fixation by Calvin cycle 5
zma01200 Carbon metabolism 5
zma00630 Glyoxylate and dicarboxylate metabolism 2
zma00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00196 Photosynthesis - antenna proteins 7
zma00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00196 Photosynthesis - antenna proteins 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00196 Photosynthesis - antenna proteins 5
tae00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 7
tae00196 Photosynthesis - antenna proteins 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 9
hvu00710 Carbon fixation by Calvin cycle 7
hvu00630 Glyoxylate and dicarboxylate metabolism 5
hvu00195 Photosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00196 Photosynthesis - antenna proteins 9
hvu00195 Photosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00710 Carbon fixation by Calvin cycle 5
sbi01200 Carbon metabolism 5
sbi00196 Photosynthesis - antenna proteins 4
sbi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00195 Photosynthesis 6
bdi00630 Glyoxylate and dicarboxylate metabolism 3
bdi00710 Carbon fixation by Calvin cycle 3
bdi01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00195 Photosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101248140 101260274 102596366 102595149 107808435 107820363 828181 100775367 100305578 103853325 103836875 117132370 100246662 100253425 7492752 7457377 25499725 107954513 107955260 107900934 125593226 106398836 106388745 102606616 127901041 4345635 4330625 4340704 100282910 100273445 100276013 123138141 123160120 123150665 123412295 123402356 8065769 100837661 5727729
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