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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101248262   nuclear pore complex protein NUP88 
 sly-r.6   101248262   nuclear pore complex protein NUP88 
 sly-u.5   101254353   nuclear pore complex protein NUP88-like 
 ath-u.5   MOS7   nuclear pore complex protein-like protein 
 gma-u.5   100801853   nuclear pore complex protein NUP88 
 vvi-u.5   100265724   nuclear pore complex protein NUP88 
 ppo-u.5   7494488   nuclear pore complex protein NUP88 
 ppo-u.5   18102695   nuclear pore complex protein NUP88 
 mtr-u.5   11422606   nuclear pore complex protein NUP88 
 osa-u.5   4336930   nuclear pore complex protein NUP88 
 zma-u.5   100272301   uncharacterized LOC100272301 

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Top 50 coexpressed genes to 101248262 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101248262 (sly-u.5 coexpression data)

CoexMap"101248262"


slyLOC101248262 | Entrez gene ID : 101248262    
Species sly ath gma vvi ppo mtr osa zma hvu sot tae nta bra cit ghi bna bdi sbi cre
Paralog 3 1 1 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly03013 [list] [network] Nucleocytoplasmic transport (106 genes)
GO BP
GO:0000056 [list] [network] ribosomal small subunit export from nucleus  (5 genes)  IEA  
GO:0000055 [list] [network] ribosomal large subunit export from nucleus  (6 genes)  IEA  
GO:0006406 [list] [network] mRNA export from nucleus  (32 genes)  IEA  
GO:0006606 [list] [network] protein import into nucleus  (46 genes)  IEA  
GO CC
GO:0005643 [list] [network] nuclear pore  (46 genes)  IEA  
GO MF
GO:0017056 [list] [network] structural constituent of nuclear pore  (21 genes)  IEA  
GO:0005515 [list] [network] protein binding  (3982 genes)  IEA  
Protein XP_069147777.1 [sequence] [blastp]
XP_069147778.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 3,  E.R. 3,  nucl 1,  cyto 1,  vacu 1,  cyto_nucl 1,  chlo_mito 1,  E.R._plas 1  (predict for XP_069147777.1)
chlo 3,  E.R. 3,  vacu 2,  nucl 1,  chlo_mito 1,  E.R._plas 1  (predict for XP_069147778.1)
Subcellular
localization
TargetP
other 9  (predict for XP_069147777.1)
other 9  (predict for XP_069147778.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101248262

.
sly-r.6
for
101248262

.
sly-u.5
for
101254353

.
ath-u.5
for
MOS7

.
gma-u.5
for
100801853

.
vvi-u.5
for
100265724

.
ppo-u.5
for
7494488

.
ppo-u.5
for
18102695

.
mtr-u.5
for
11422606

.
osa-u.5
for
4336930

.
zma-u.5
for
100272301

.


Ortholog ID: 9637
Species ath gma sly sly osa zma bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol MOS7 LOC100801853 LOC101248262 LOC101254353 LOC4336930 LOC100272301 LOC103846909 LOC100265724 LOC7494488 LOC18102695 LOC11422606 LOC123054363 LOC123046505 LOC123427667 LOC107931823 LOC121222637 LOC106439684 LOC106419350 CHLRE_06g278900v5 LOC8063938 LOC102585027 LOC102608157 LOC100822200 LOC107790996 LOC107779325
Function* nuclear pore complex protein-like protein nuclear pore complex protein NUP88 nuclear pore complex protein NUP88 nuclear pore complex protein NUP88-like nuclear pore complex protein NUP88 uncharacterized LOC100272301 nuclear pore complex protein NUP88 nuclear pore complex protein NUP88 nuclear pore complex protein NUP88 nuclear pore complex protein NUP88 nuclear pore complex protein NUP88 nuclear pore complex protein NUP88 nuclear pore complex protein NUP88 nuclear pore complex protein NUP88 nuclear pore complex protein NUP88 nuclear pore complex protein NUP88 nuclear pore complex protein NUP88-like nuclear pore complex protein NUP88 uncharacterized protein nuclear pore complex protein NUP88 nuclear pore complex protein NUP88-like nuclear pore complex protein NUP88 nuclear pore complex protein NUP88 nuclear pore complex protein NUP88 nuclear pore complex protein NUP88
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 4
gma03040 Spliceosome 3
gma03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 9
sly03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03013 Nucleocytoplasmic transport 2
sly03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 4
osa03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 5
zma03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 5
bra03040 Spliceosome 4
bra03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 2
hvu00510 N-Glycan biosynthesis 2
hvu00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00230 Purine metabolism 4
ghi00250 Alanine, aspartate and glutamate metabolism 4
ghi01232 Nucleotide metabolism 4
ghi01240 Biosynthesis of cofactors 4
ghi01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00230 Purine metabolism 4
ghi00250 Alanine, aspartate and glutamate metabolism 4
ghi01232 Nucleotide metabolism 4
ghi01240 Biosynthesis of cofactors 4
ghi01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 2
bna00540 Lipopolysaccharide biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 2
bna00540 Lipopolysaccharide biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03013 Nucleocytoplasmic transport 2
cre03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
sot03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 7
bdi03020 RNA polymerase 2
bdi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 830452 100801853 101248262 101254353 4336930 100272301 103846909 100265724 7494488 18102695 11422606 123054363 123046505 123427667 107931823 121222637 106439684 106419350 5720870 8063938 102585027 102608157 100822200 107790996 107779325
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