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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101249641   glyceraldehyde-3-phosphate dehydrogenase, cytosolic 
 sly-r.6   101249641   glyceraldehyde-3-phosphate dehydrogenase, cytosolic 
 sly-u.5   101256813   glyceraldehyde-3-phosphate dehydrogenase GAPCP1, chloroplastic 
 sly-u.5   GAPDH   glyceraldehyde 3-phosphate dehydrogenase 
 sly-u.5   GAPC2   glyceraldehyde-3-phosphate dehydrogenase 
 ath-u.5   GAPC2   glyceraldehyde-3-phosphate dehydrogenase C2 
 ath-u.5   GAPCP-1   glyceraldehyde-3-phosphate dehydrogenase of plastid 1 
 ath-u.5   GAPC1   glyceraldehyde-3-phosphate dehydrogenase C subunit 1 
 gma-u.5   100807342   glyceraldehyde-3-phosphate dehydrogenase, cytosolic-like 
 gma-u.5   100804853   glyceraldehyde-3-phosphate dehydrogenase GAPCP1, chloroplastic 
 gma-u.5   100794095   glyceraldehyde-3-phosphate dehydrogenase, cytosolic 
 vvi-u.5   100264789   glyceraldehyde-3-phosphate dehydrogenase, cytosolic 
 vvi-u.5   100265689   glyceraldehyde-3-phosphate dehydrogenase GAPCP1, chloroplastic 
 vvi-u.5   100233024   glyceraldehyde-3-phosphate dehydrogenase, cytosolic 
 ppo-u.5   7454689   glyceraldehyde-3-phosphate dehydrogenase 2, cytosolic 
 ppo-u.5   7460038   glyceraldehyde-3-phosphate dehydrogenase GAPC1, cytosolic 
 ppo-u.5   7467691   glyceraldehyde-3-phosphate dehydrogenase, cytosolic 
 mtr-u.5   11441068   glyceraldehyde-3-phosphate dehydrogenase, cytosolic 
 mtr-u.5   11425454   glyceraldehyde-3-phosphate dehydrogenase GAPCP1, chloroplastic 
 mtr-u.5   11407960   glyceraldehyde-3-phosphate dehydrogenase, cytosolic 
 osa-u.5   4344564   glyceraldehyde-3-phosphate dehydrogenase 1, cytosolic-like 
 osa-u.5   4328446   glyceraldehyde-3-phosphate dehydrogenase GAPCP1, chloroplastic 
 osa-u.5   4336216   glyceraldehyde-3-phosphate dehydrogenase 2, cytosolic-like 
 zma-u.5   542333   cytosolic glyceroldehyde-3-phosphate dehydrogenase GAPC3 
 zma-u.5   100282981   Glyceraldehyde-3-phosphate dehydrogenase, cytosolic 
 zma-u.5   103632492   glyceraldehyde-3-phosphate dehydrogenase GAPCP2, chloroplastic 

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Top 50 coexpressed genes to 101249641 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101249641 (sly-u.5 coexpression data)

CoexMap"101249641"


slyLOC101249641 | Entrez gene ID : 101249641      
Species sly ath gma vvi ppo mtr osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 5 3 3 3 3 3 3 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly00010 [list] [network] Glycolysis / Gluconeogenesis (133 genes)
sly00710 [list] [network] Carbon fixation by Calvin cycle (82 genes)
sly01200 [list] [network] Carbon metabolism (290 genes)
sly01230 [list] [network] Biosynthesis of amino acids (226 genes)
GO BP
GO:0006006 [list] [network] glucose metabolic process  (43 genes)  IEA  
GO:0006096 [list] [network] glycolytic process  (57 genes)  IEA  
GO CC
GO:0005829 [list] [network] cytosol  (916 genes)  IEA  
GO MF
GO:0004365 [list] [network] glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity  (11 genes)  IEA  
GO:0050661 [list] [network] NADP binding  (55 genes)  IEA  
GO:0051287 [list] [network] NAD binding  (86 genes)  IEA  
Protein XP_004239353.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 10  (predict for XP_004239353.1)
Subcellular
localization
TargetP
mito 3,  other 3  (predict for XP_004239353.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101249641

.
sly-r.6
for
101249641

.
sly-u.5
for
101256813

.
sly-u.5
for
GAPDH

.
sly-u.5
for
GAPC2

.
ath-u.5
for
GAPC2

.
ath-u.5
for
GAPCP-1

.
ath-u.5
for
GAPC1

.
gma-u.5
for
100807342

.
gma-u.5
for
100804853

.
gma-u.5
for
100794095

.
vvi-u.5
for
100264789

.
vvi-u.5
for
100265689

.
vvi-u.5
for
100233024

.
ppo-u.5
for
7454689

.
ppo-u.5
for
7460038

.
ppo-u.5
for
7467691

.
mtr-u.5
for
11441068

.
mtr-u.5
for
11425454

.
mtr-u.5
for
11407960

.
osa-u.5
for
4344564

.
osa-u.5
for
4328446

.
osa-u.5
for
4336216

.
zma-u.5
for
542333

.
zma-u.5
for
100282981

.
zma-u.5
for
103632492

.


Ortholog ID: 493
Species ath ath gma gma sly sly osa osa zma zma bra vvi vvi ppo ppo mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit cit bdi nta nta
Symbol GAPCP-1 GAPC2 LOC100783902 LOC100782924 LOC101249641 LOC101256813 LOC4341782 LOC4336216 LOC100282981 LOC103632492 LOC103850055 LOC100233024 LOC100264789 LOC7484457 LOC7460675 LOC11407960 LOC123163161 LOC100125727 LOC123413551 LOC123401526 LOC107957019 LOC107926568 LOC106447623 LOC106382350 CHLRE_12g485150v5 LOC110430988 LOC110430989 LOC102589564 LOC102605742 LOC102578015 LOC102624117 LOC100845915 LOC107776287 LOC107790641
Function* glyceraldehyde-3-phosphate dehydrogenase of plastid 1 glyceraldehyde-3-phosphate dehydrogenase C2 glyceraldehyde-3-phosphate dehydrogenase, cytosolic glyceraldehyde-3-phosphate dehydrogenase, cytosolic-like glyceraldehyde-3-phosphate dehydrogenase, cytosolic glyceraldehyde-3-phosphate dehydrogenase GAPCP1, chloroplastic glyceraldehyde-3-phosphate dehydrogenase GAPCP1, chloroplastic glyceraldehyde-3-phosphate dehydrogenase 2, cytosolic-like Glyceraldehyde-3-phosphate dehydrogenase, cytosolic glyceraldehyde-3-phosphate dehydrogenase GAPCP2, chloroplastic glyceraldehyde-3-phosphate dehydrogenase, cytosolic glyceraldehyde-3-phosphate dehydrogenase, cytosolic glyceraldehyde-3-phosphate dehydrogenase, cytosolic glyceraldehyde-3-phosphate dehydrogenase 2, cytosolic glyceraldehyde-3-phosphate dehydrogenase GAPCP2, chloroplastic glyceraldehyde-3-phosphate dehydrogenase, cytosolic glyceraldehyde-3-phosphate dehydrogenase 1, cytosolic glyceraldehyde-3-phosphate dehydrogenase 2, cytosolic glyceraldehyde-3-phosphate dehydrogenase 1, cytosolic glyceraldehyde-3-phosphate dehydrogenase GAPCP1, chloroplastic-like glyceraldehyde-3-phosphate dehydrogenase 2, cytosolic glyceraldehyde-3-phosphate dehydrogenase 2, cytosolic glyceraldehyde-3-phosphate dehydrogenase, cytosolic-like glyceraldehyde-3-phosphate dehydrogenase, cytosolic-like uncharacterized protein glyceraldehyde-3-phosphate dehydrogenase 1, cytosolic-like glyceraldehyde-3-phosphate dehydrogenase 1, cytosolic glyceraldehyde-3-phosphate dehydrogenase GAPCP1, chloroplastic-like glyceraldehyde-3-phosphate dehydrogenase, cytosolic glyceraldehyde-3-phosphate dehydrogenase GAPC1, cytosolic glyceraldehyde-3-phosphate dehydrogenase GAPC1, cytosolic glyceraldehyde-3-phosphate dehydrogenase 1, cytosolic glyceraldehyde-3-phosphate dehydrogenase, cytosolic glyceraldehyde-3-phosphate dehydrogenase GAPCP2, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00190 Oxidative phosphorylation 6
ath01200 Carbon metabolism 5
ath03018 RNA degradation 4
ath00630 Glyoxylate and dicarboxylate metabolism 3
ath00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 7
ath00010 Glycolysis / Gluconeogenesis 5
ath01230 Biosynthesis of amino acids 4
ath00190 Oxidative phosphorylation 4
ath00710 Carbon fixation by Calvin cycle 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 11
gma00710 Carbon fixation by Calvin cycle 10
gma00010 Glycolysis / Gluconeogenesis 8
gma01230 Biosynthesis of amino acids 7
gma00620 Pyruvate metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00010 Glycolysis / Gluconeogenesis 18
gma01230 Biosynthesis of amino acids 11
gma01200 Carbon metabolism 10
gma00620 Pyruvate metabolism 8
gma00350 Tyrosine metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 7
sly01230 Biosynthesis of amino acids 6
sly03010 Ribosome 4
sly00710 Carbon fixation by Calvin cycle 3
sly00260 Glycine, serine and threonine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00010 Glycolysis / Gluconeogenesis 2
osa00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 7
osa00010 Glycolysis / Gluconeogenesis 6
osa01200 Carbon metabolism 6
osa01230 Biosynthesis of amino acids 6
osa00710 Carbon fixation by Calvin cycle 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01200 Carbon metabolism 6
zma01230 Biosynthesis of amino acids 6
zma00010 Glycolysis / Gluconeogenesis 4
zma00710 Carbon fixation by Calvin cycle 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01230 Biosynthesis of amino acids 5
zma01200 Carbon metabolism 3
zma00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
zma00010 Glycolysis / Gluconeogenesis 2
zma00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 9
bra01230 Biosynthesis of amino acids 9
bra03050 Proteasome 8
bra00710 Carbon fixation by Calvin cycle 8
bra00010 Glycolysis / Gluconeogenesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01200 Carbon metabolism 14
vvi01230 Biosynthesis of amino acids 9
vvi00710 Carbon fixation by Calvin cycle 8
vvi00010 Glycolysis / Gluconeogenesis 8
vvi00020 Citrate cycle (TCA cycle) 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00010 Glycolysis / Gluconeogenesis 6
vvi01200 Carbon metabolism 5
vvi01230 Biosynthesis of amino acids 5
vvi00620 Pyruvate metabolism 2
vvi00052 Galactose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00190 Oxidative phosphorylation 4
ppo03010 Ribosome 2
ppo01200 Carbon metabolism 2
ppo01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01230 Biosynthesis of amino acids 8
ppo01200 Carbon metabolism 7
ppo00010 Glycolysis / Gluconeogenesis 5
ppo00710 Carbon fixation by Calvin cycle 4
ppo00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01200 Carbon metabolism 10
mtr01230 Biosynthesis of amino acids 9
mtr00710 Carbon fixation by Calvin cycle 8
mtr00010 Glycolysis / Gluconeogenesis 7
mtr00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01200 Carbon metabolism 12
tae01230 Biosynthesis of amino acids 12
tae00710 Carbon fixation by Calvin cycle 10
tae00010 Glycolysis / Gluconeogenesis 6
tae00220 Arginine biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01200 Carbon metabolism 18
tae01230 Biosynthesis of amino acids 17
tae00010 Glycolysis / Gluconeogenesis 14
tae00710 Carbon fixation by Calvin cycle 11
tae00260 Glycine, serine and threonine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00010 Glycolysis / Gluconeogenesis 4
hvu01200 Carbon metabolism 4
hvu01230 Biosynthesis of amino acids 4
hvu00710 Carbon fixation by Calvin cycle 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00010 Glycolysis / Gluconeogenesis 7
hvu01200 Carbon metabolism 7
hvu01230 Biosynthesis of amino acids 7
hvu00620 Pyruvate metabolism 5
hvu00020 Citrate cycle (TCA cycle) 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00710 Carbon fixation by Calvin cycle 12
ghi01200 Carbon metabolism 12
ghi00010 Glycolysis / Gluconeogenesis 10
ghi01230 Biosynthesis of amino acids 9
ghi00020 Citrate cycle (TCA cycle) 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00710 Carbon fixation by Calvin cycle 9
ghi01200 Carbon metabolism 9
ghi00010 Glycolysis / Gluconeogenesis 8
ghi00520 Amino sugar and nucleotide sugar metabolism 6
ghi01250 Biosynthesis of nucleotide sugars 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00010 Glycolysis / Gluconeogenesis 6
bna00710 Carbon fixation by Calvin cycle 6
bna01200 Carbon metabolism 6
bna01230 Biosynthesis of amino acids 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00010 Glycolysis / Gluconeogenesis 7
bna00710 Carbon fixation by Calvin cycle 7
bna01200 Carbon metabolism 7
bna01230 Biosynthesis of amino acids 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01200 Carbon metabolism 5
cre00020 Citrate cycle (TCA cycle) 3
cre01230 Biosynthesis of amino acids 2
cre00640 Propanoate metabolism 2
cre00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01200 Carbon metabolism 10
sbi00010 Glycolysis / Gluconeogenesis 8
sbi00710 Carbon fixation by Calvin cycle 7
sbi01230 Biosynthesis of amino acids 7
sbi00480 Glutathione metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01200 Carbon metabolism 9
sbi00010 Glycolysis / Gluconeogenesis 7
sbi00710 Carbon fixation by Calvin cycle 7
sbi01230 Biosynthesis of amino acids 7
sbi00053 Ascorbate and aldarate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 10
sot01230 Biosynthesis of amino acids 7
sot00010 Glycolysis / Gluconeogenesis 4
sot00260 Glycine, serine and threonine metabolism 4
sot00030 Pentose phosphate pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 3
sot01230 Biosynthesis of amino acids 3
sot00190 Oxidative phosphorylation 2
sot00270 Cysteine and methionine metabolism 2
sot03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 12
cit00010 Glycolysis / Gluconeogenesis 11
cit01230 Biosynthesis of amino acids 11
cit00710 Carbon fixation by Calvin cycle 6
cit00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 6
cit00010 Glycolysis / Gluconeogenesis 5
cit00710 Carbon fixation by Calvin cycle 5
cit01230 Biosynthesis of amino acids 5
cit04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01230 Biosynthesis of amino acids 14
bdi01200 Carbon metabolism 13
bdi00010 Glycolysis / Gluconeogenesis 9
bdi00270 Cysteine and methionine metabolism 6
bdi00710 Carbon fixation by Calvin cycle 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00760 Nicotinate and nicotinamide metabolism 4
nta01240 Biosynthesis of cofactors 4
nta03018 RNA degradation 2
nta00010 Glycolysis / Gluconeogenesis 2
nta00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00010 Glycolysis / Gluconeogenesis 8
nta01200 Carbon metabolism 8
nta01230 Biosynthesis of amino acids 8
nta00710 Carbon fixation by Calvin cycle 4
nta03018 RNA degradation 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 844291 837904 100783902 100782924 101249641 101256813 4341782 4336216 100282981 103632492 103850055 100233024 100264789 7484457 7460675 11407960 123163161 100125727 123413551 123401526 107957019 107926568 106447623 106382350 5728718 110430988 110430989 102589564 102605742 102578015 102624117 100845915 107776287 107790641
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