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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101249682   enhancer of mRNA-decapping protein 4-like 
 sly-r.6   101249682   enhancer of mRNA-decapping protein 4-like 
 sly-u.5   101268011   enhancer of mRNA-decapping protein 4-like 
 ath-u.5   VCR   varicose-like protein 
 ath-u.5   VCS   Transducin/WD40 repeat-like superfamily protein 
 gma-u.5   100797699   enhancer of mRNA-decapping protein 4 
 gma-u.5   100798228   enhancer of mRNA-decapping protein 4 
 gma-u.5   100802374   enhancer of mRNA-decapping protein 4 
 vvi-u.5   100259985   enhancer of mRNA-decapping protein 4 
 vvi-u.5   100241190   enhancer of mRNA-decapping protein 4 
 ppo-u.5   7471701   enhancer of mRNA-decapping protein 4 
 ppo-u.5   18105985   enhancer of mRNA-decapping protein 4 
 ppo-u.5   7458458   enhancer of mRNA-decapping protein 4 
 mtr-u.5   11444866   enhancer of mRNA-decapping protein 4 
 mtr-u.5   11411068   enhancer of mRNA-decapping protein 4 
 osa-u.5   4340825   enhancer of mRNA-decapping protein 4 
 osa-u.5   4330568   enhancer of mRNA-decapping protein 4 
 zma-u.5   103639399   varicose-related protein 
 zma-u.5   103646034   enhancer of mRNA-decapping protein 4 
 zma-u.5   103628836   enhancer of mRNA-decapping protein 4-like 

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Top 50 coexpressed genes to 101249682 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101249682 (sly-u.5 coexpression data)

CoexMap"101249682"


slyLOC101249682 | Entrez gene ID : 101249682    
Species sly ath gma vvi ppo mtr osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 3 2 3 2 3 2 2 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly03018 [list] [network] RNA degradation (116 genes)
GO BP
GO:0031087 [list] [network] deadenylation-independent decapping of nuclear-transcribed mRNA  (5 genes)  IEA  
GO CC
GO:0000932 [list] [network] P-body  (50 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (3982 genes)  IEA  
Protein XP_004248289.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  chlo 2,  vacu 1,  cysk 1  (predict for XP_004248289.1)
Subcellular
localization
TargetP
chlo 9,  other 3  (predict for XP_004248289.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101249682

.
sly-r.6
for
101249682

.
sly-u.5
for
101268011

.
ath-u.5
for
VCR

.
ath-u.5
for
VCS

.
gma-u.5
for
100797699

.
gma-u.5
for
100798228

.
gma-u.5
for
100802374

.
vvi-u.5
for
100259985

.
vvi-u.5
for
100241190

.
ppo-u.5
for
7471701

.
ppo-u.5
for
18105985

.
ppo-u.5
for
7458458

.
mtr-u.5
for
11444866

.
mtr-u.5
for
11411068

.
osa-u.5
for
4340825

.
osa-u.5
for
4330568

.
zma-u.5
for
103639399

.
zma-u.5
for
103646034

.
zma-u.5
for
103628836

.


Ortholog ID: 2552
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sot sot cit cit bdi bdi nta nta
Symbol VCR VCS LOC100797699 LOC100798228 LOC101268011 LOC101249682 LOC4330568 LOC4340825 LOC103628836 LOC103646034 LOC103870186 LOC117125612 LOC100241190 LOC100259985 LOC7471701 LOC11411068 LOC11444866 LOC123166762 LOC123139392 LOC123412041 LOC123404134 LOC107888970 LOC107888981 LOC106452332 LOC106452333 CHLRE_12g553100v5 LOC8071761 LOC102599686 LOC102602740 LOC102631233 LOC102625105 LOC100821137 LOC100830941 LOC107772717 LOC107794736
Function* varicose-like protein Transducin/WD40 repeat-like superfamily protein enhancer of mRNA-decapping protein 4 enhancer of mRNA-decapping protein 4 enhancer of mRNA-decapping protein 4-like enhancer of mRNA-decapping protein 4-like enhancer of mRNA-decapping protein 4 enhancer of mRNA-decapping protein 4 enhancer of mRNA-decapping protein 4-like enhancer of mRNA-decapping protein 4 enhancer of mRNA-decapping protein 4 enhancer of mRNA-decapping protein 4 enhancer of mRNA-decapping protein 4 enhancer of mRNA-decapping protein 4 enhancer of mRNA-decapping protein 4 enhancer of mRNA-decapping protein 4 enhancer of mRNA-decapping protein 4 enhancer of mRNA-decapping protein 4 enhancer of mRNA-decapping protein 4 enhancer of mRNA-decapping protein 4-like enhancer of mRNA-decapping protein 4-like enhancer of mRNA-decapping protein 4 enhancer of mRNA-decapping protein 4 enhancer of mRNA-decapping protein 4 enhancer of mRNA-decapping protein 4 uncharacterized protein enhancer of mRNA-decapping protein 4 enhancer of mRNA-decapping protein 4 enhancer of mRNA-decapping protein 4-like enhancer of mRNA-decapping protein 4-like enhancer of mRNA-decapping protein 4-like enhancer of mRNA-decapping protein 4 enhancer of mRNA-decapping protein 4 enhancer of mRNA-decapping protein 4-like enhancer of mRNA-decapping protein 4-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 2
ath04142 Lysosome 2
ath03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 4
ath04142 Lysosome 3
ath04144 Endocytosis 3
ath05100 Bacterial invasion of epithelial cells 2
ath03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 5
gma03082 ATP-dependent chromatin remodeling 3
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 5
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04142 Lysosome 3
osa04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 5
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03082 ATP-dependent chromatin remodeling 3
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 3
vvi03018 RNA degradation 2
vvi03013 Nucleocytoplasmic transport 2
vvi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 3
mtr03018 RNA degradation 2
mtr04016 MAPK signaling pathway - plant 2
mtr00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 3
mtr00562 Inositol phosphate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04016 MAPK signaling pathway - plant 3
tae03018 RNA degradation 3
tae00562 Inositol phosphate metabolism 3
tae04070 Phosphatidylinositol signaling system 3
tae04145 Phagosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04144 Endocytosis 4
hvu04142 Lysosome 3
hvu05100 Bacterial invasion of epithelial cells 2
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00020 Citrate cycle (TCA cycle) 2
ghi00630 Glyoxylate and dicarboxylate metabolism 2
ghi01200 Carbon metabolism 2
ghi01210 2-Oxocarboxylic acid metabolism 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
ghi00020 Citrate cycle (TCA cycle) 2
ghi00630 Glyoxylate and dicarboxylate metabolism 2
ghi01200 Carbon metabolism 2
ghi01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 3
bna03018 RNA degradation 2
bna03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 2
bna03013 Nucleocytoplasmic transport 2
bna04120 Ubiquitin mediated proteolysis 2
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 4
sbi04142 Lysosome 2
sbi05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 3
cit03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 4
cit03018 RNA degradation 2
cit04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 3
bdi03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03420 Nucleotide excision repair 2
nta04120 Ubiquitin mediated proteolysis 2
nta03018 RNA degradation 2
nta04075 Plant hormone signal transduction 2
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 820529 820530 100797699 100798228 101268011 101249682 4330568 4340825 103628836 103646034 103870186 117125612 100241190 100259985 7471701 11411068 11444866 123166762 123139392 123412041 123404134 107888970 107888981 106452332 106452333 66055822 8071761 102599686 102602740 102631233 102625105 100821137 100830941 107772717 107794736
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