ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sly-u.5	101246199	uncharacterized LOC101246199
sly-u.5	101246686	uncharacterized LOC101246686
sly-u.5	101248671	uncharacterized LOC101248671
sot-r.1	102596965	hippocampus abundant transcript-like protein 1
sot-r.1	102586357	hippocampus abundant transcript-like protein 1
sot-r.1	102583153	tetracycline resistance protein, class A-like
nta-r.1	107832780	uncharacterized LOC107832780
nta-r.1	107826793	uncharacterized LOC107826793
ath-u.5	AT2G16980	Major facilitator superfamily protein
ath-u.5	AT2G16990	Major facilitator superfamily protein
gma-u.5	100803054	hippocampus abundant transcript-like protein 1
bra-r.6	103860499	tetracycline resistance protein, class E
bra-r.6	103846003	multidrug resistance protein 2
bra-r.6	103849042	hippocampus abundant transcript-like protein 1
vvi-u.5	100257341	uncharacterized LOC100257341
vvi-u.5	100252243	uncharacterized LOC100252243
vvi-u.5	100260232	uncharacterized LOC100260232
ppo-u.5	7496897	uncharacterized LOC7496897
ppo-u.5	7486914	uncharacterized LOC7486914
ppo-u.5	7477174	uncharacterized LOC7477174
mtr-u.5	11405374	hippocampus abundant transcript-like protein 1
mtr-u.5	11411764	hippocampus abundant transcript-like protein 1
ghi-r.1	107947342	hippocampus abundant transcript-like protein 1
ghi-r.1	107916544	hippocampus abundant transcript-like protein 1
ghi-r.1	107922177	hippocampus abundant transcript-like protein 1
bna-r.1	106447820	hippocampus abundant transcript 1 protein-like
bna-r.1	106439823	multidrug resistance protein 2-like
cit-r.1	102613590	uncharacterized LOC102613590
cit-r.1	102622346	uncharacterized LOC102622346
cit-r.1	102620188	uncharacterized LOC102620188
osa-u.5	9272544	uncharacterized LOC9272544
osa-u.5	4330257	uncharacterized LOC4330257
osa-u.5	4349793	uncharacterized LOC4349793
zma-u.5	100272739	uncharacterized LOC100272739
zma-u.5	100277128	uncharacterized LOC100277128
zma-u.5	100191596	tetracycline transporter protein
tae-r.2	123051400	tetracycline resistance protein, class A
tae-r.2	123106818	tetracycline resistance protein, class D
tae-r.2	123111156	multidrug resistance protein MdtL
hvu-r.1	123437744	tetracycline resistance protein, class A-like
hvu-r.1	123395308	tetracycline resistance protein, class D-like
sbi-r.1	8058540	tetracycline resistance protein, class H
sbi-r.1	8062849	hippocampus abundant transcript 1 protein
sbi-r.1	8076055	hippocampus abundant transcript 1 protein
bdi-r.1	100833620	tetracycline resistance protein, class A
bdi-r.1	100833312	tetracycline resistance protein, class H
bdi-r.1	100835722	hippocampus abundant transcript 1 protein
cre-r.1	CHLRE_16g656150v5	uncharacterized protein

Top 50 coexpressed genes to 101246199 (sly-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 101246199 (sly-u.5 coexpression data)

CoexMap"101250386"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0055085 [list] [network] transmembrane transport

(966 genes)

IEA

GO CC

GO MF

GO:0022857 [list] [network] transmembrane transporter activity

(1184 genes)

IEA

Protein

XP_004253206.2 [sequence] [blastp]

Subcellular
localization
wolf

plas 4, vacu 3, E.R. 2, nucl_plas 2, golg_plas 2, cysk_plas 2, mito_plas 2, cyto_plas 2

(predict for XP_004253206.2)

Subcellular
localization
TargetP

scret 9

(predict for XP_004253206.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sly-u.5 for 101246199	sly-u.5 for 101246686	sly-u.5 for 101248671	sot-r.1 for 102596965	sot-r.1 for 102586357	sot-r.1 for 102583153	nta-r.1 for 107832780	nta-r.1 for 107826793	ath-u.5 for AT2G16980	ath-u.5 for AT2G16990	gma-u.5 for 100803054	bra-r.6 for 103860499	bra-r.6 for 103846003	bra-r.6 for 103849042	vvi-u.5 for 100257341	vvi-u.5 for 100252243	vvi-u.5 for 100260232	ppo-u.5 for 7496897	ppo-u.5 for 7486914	ppo-u.5 for 7477174	mtr-u.5 for 11405374	mtr-u.5 for 11411764	ghi-r.1 for 107947342	ghi-r.1 for 107916544	ghi-r.1 for 107922177	bna-r.1 for 106447820	bna-r.1 for 106439823	cit-r.1 for 102613590	cit-r.1 for 102622346	cit-r.1 for 102620188	osa-u.5 for 9272544	osa-u.5 for 4330257	osa-u.5 for 4349793	zma-u.5 for 100272739	zma-u.5 for 100277128	zma-u.5 for 100191596	tae-r.2 for 123051400	tae-r.2 for 123106818	tae-r.2 for 123111156	hvu-r.1 for 123437744	hvu-r.1 for 123395308	sbi-r.1 for 8058540	sbi-r.1 for 8062849	sbi-r.1 for 8076055	bdi-r.1 for 100833620	bdi-r.1 for 100833312	bdi-r.1 for 100835722	cre-r.1 for CHLRE_16g656150v5

Ortholog

Ortholog ID: 944

Species

sly

sot

nta

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

uncharacterized LOC101267067

uncharacterized LOC101267718

hippocampus abundant transcript-like protein 1

uncharacterized LOC107800094

uncharacterized LOC107794205

uncharacterized LOC107791957

Major facilitator superfamily protein

hippocampus abundant transcript-like protein 1

tetracycline resistance protein, class E

hippocampus abundant transcript-like protein 1

tetracycline resistance protein, class A

uncharacterized LOC100257341

uncharacterized LOC100252243

uncharacterized LOC100260232

uncharacterized LOC7477174

uncharacterized LOC7474984

uncharacterized LOC7494001

hippocampus abundant transcript-like protein 1

hippocampus abundant transcript 1 protein

hippocampus abundant transcript-like protein 1

uncharacterized LOC102613590

uncharacterized LOC102622346

uncharacterized LOC102620188

uncharacterized LOC9272544

uncharacterized LOC4330257

uncharacterized LOC4349793

uncharacterized LOC100272739

uncharacterized LOC100277128

tetracycline transporter protein

tetracycline resistance protein, class D

uncharacterized LOC123124560

hippocampus abundant transcript 1 protein

tetracycline resistance protein, class A-like

tetracycline resistance protein, class D-like

tetracycline resistance protein, class H

hippocampus abundant transcript 1 protein

tetracycline resistance protein, class A

tetracycline resistance protein, class H

hippocampus abundant transcript 1 protein

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00052	Galactose metabolism	2
sly00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00195	Photosynthesis	6
sly00190	Oxidative phosphorylation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00562	Inositol phosphate metabolism	2
nta00564	Glycerophospholipid metabolism	2
nta00565	Ether lipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00941	Flavonoid biosynthesis	4
gma04712	Circadian rhythm - plant	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00071	Fatty acid degradation	4
bra01212	Fatty acid metabolism	4
bra00240	Pyrimidine metabolism	3
bra00410	beta-Alanine metabolism	3
bra00770	Pantothenate and CoA biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi01200	Carbon metabolism	4
vvi00710	Carbon fixation by Calvin cycle	3
vvi01240	Biosynthesis of cofactors	2
vvi00010	Glycolysis / Gluconeogenesis	2
vvi00620	Pyruvate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00500	Starch and sucrose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00562	Inositol phosphate metabolism	2
mtr00564	Glycerophospholipid metabolism	2
mtr00565	Ether lipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00270	Cysteine and methionine metabolism	2
ghi00280	Valine, leucine and isoleucine degradation	2
ghi00290	Valine, leucine and isoleucine biosynthesis	2
ghi00770	Pantothenate and CoA biosynthesis	2
ghi00966	Glucosinolate biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00592	alpha-Linolenic acid metabolism	2
ghi03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00999	Biosynthesis of various plant secondary metabolites	4
osa00270	Cysteine and methionine metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00460	Cyanoamino acid metabolism	2
zma00500	Starch and sucrose metabolism	2
zma00999	Biosynthesis of various plant secondary metabolites	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00511	Other glycan degradation	2
tae00600	Sphingolipid metabolism	2
tae04382	Cornified envelope formation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00511	Other glycan degradation	2
tae00600	Sphingolipid metabolism	2
tae04382	Cornified envelope formation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00460	Cyanoamino acid metabolism	3
tae00500	Starch and sucrose metabolism	3
tae00999	Biosynthesis of various plant secondary metabolites	3
tae00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00999	Biosynthesis of various plant secondary metabolites	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00520	Amino sugar and nucleotide sugar metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre01200	Carbon metabolism	3
cre01230	Biosynthesis of amino acids	2
cre01240	Biosynthesis of cofactors	2
cre00920	Sulfur metabolism	2
cre01320	Sulfur cycle	2

Expression

Expression pattern

Entrez Gene ID^*

101267067

101267718

102596965

102599762

107800094

107794205

107791957

816201

816202

100789302

100805770

103860499

103849042

103837786

100257341

100252243

100260232

7477174

7474984

7494001

11405374

11411764

25485646

107916544

107922177

107908637

106429568

102613590

102622346

102620188

9272544

4330257

4349793

100272739

100277128

100191596

123106818

123124560

123145050

123437744

123395308

8058540

8062849

8076055

100833620

100833312

100830230

5723454

The preparation time of this page was 0.6 [sec].


Species	sly	sot	nta	ath	gma	bra	vvi	ppo	mtr	ghi	bna	cit	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	3	3	2	2	1	3	3	3	2	3	2	3	3	3	3	2	3	3	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 101246199 (sly-u.5 coexpression data)

Top 50 enrichment test to 101246199 (sly-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**