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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5  101250585  mediator of RNA polymerase II transcription subunit 6 
 sly-r.6  101250585  mediator of RNA polymerase II transcription subunit 6 
 sly-u.5  101249154  mediator of RNA polymerase II transcription subunit 6 
 sot-r.1  102601226  mediator of RNA polymerase II transcription subunit 6 
 nta-r.1  107782641  mediator of RNA polymerase II transcription subunit 6-like 
 nta-r.1  107793285  mediator of RNA polymerase II transcription subunit 6 
 ath-u.5  MED6  RNA polymerase transcriptional regulation mediator-like protein 
 gma-u.5  100792248  mediator of RNA polymerase II transcription subunit 6 
 gma-u.5  106799203  mediator of RNA polymerase II transcription subunit 6 
 bra-r.6  103869179  mediator of RNA polymerase II transcription subunit 6 
 vvi-u.5  100253150  mediator of RNA polymerase II transcription subunit 6 
 mtr-u.5  25500369  mediator of RNA polymerase II transcription subunit 6 
 ghi-r.1  121222356  mediator of RNA polymerase II transcription subunit 6 
 ghi-r.1  107958045  mediator of RNA polymerase II transcription subunit 6 
 ghi-r.1  107916333  mediator of RNA polymerase II transcription subunit 6 
 bna-r.1  125603028  mediator of RNA polymerase II transcription subunit 6-like 
 bna-r.1  106446006  mediator of RNA polymerase II transcription subunit 6 
 bna-r.1  106390770  mediator of RNA polymerase II transcription subunit 6-like 
 cit-r.1  102622399  mediator of RNA polymerase II transcription subunit 6 
 osa-u.5  4340496  mediator of RNA polymerase II transcription subunit 6 
 zma-u.5  100279775  uncharacterized LOC100279775 
 tae-r.2  123150746  mediator of RNA polymerase II transcription subunit 6 
 tae-r.2  123159669  mediator of RNA polymerase II transcription subunit 6 
 tae-r.2  123165554  mediator of RNA polymerase II transcription subunit 6 
 hvu-r.1  123410497  mediator of RNA polymerase II transcription subunit 6 
 sbi-r.1  8080033  mediator of RNA polymerase II transcription subunit 6 
 bdi-r.1  100821382  mediator of RNA polymerase II transcription subunit 6 
 cre-r.1  CHLRE_11g467659v5  uncharacterized protein 

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Top 50 coexpressed genes to 101250585 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101250585 (sly-u.5 coexpression data)

CoexMap"101250585"


slyLOC101250585 | Entrez gene ID : 101250585
Species sly sot nta ath gma bra vvi mtr ghi bna cit osa zma tae hvu sbi bdi cre ppo
Paralog 3 1 2 1 2 1 1 1 3 3 1 1 1 3 1 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (493 genes)  IEA  
GO CC
GO:0070847 [list] [network] core mediator complex  (10 genes)  IEA  
GO:0016592 [list] [network] mediator complex  (47 genes)  IEA  
GO MF
GO:0003713 [list] [network] transcription coactivator activity  (45 genes)  IEA  
Protein XP_010318524.1 [sequence] [blastp]
XP_069151510.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cysk 1,  cyto 1,  plas 1,  extr 1,  cyto_plas 1  (predict for XP_010318524.1)
nucl 6,  cyto 2,  chlo 1,  extr 1,  cysk 1  (predict for XP_069151510.1)
Subcellular
localization
TargetP
other 8,  chlo 3  (predict for XP_010318524.1)
other 8,  chlo 3  (predict for XP_069151510.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

sly-u.5
for
101250585


sly-r.6
for
101250585


sly-u.5
for
101249154


sot-r.1
for
102601226


nta-r.1
for
107782641


nta-r.1
for
107793285


ath-u.5
for
MED6


gma-u.5
for
100792248


gma-u.5
for
106799203


bra-r.6
for
103869179


vvi-u.5
for
100253150


mtr-u.5
for
25500369


ghi-r.1
for
121222356


ghi-r.1
for
107958045


ghi-r.1
for
107916333


bna-r.1
for
125603028


bna-r.1
for
106446006


bna-r.1
for
106390770


cit-r.1
for
102622399


osa-u.5
for
4340496


zma-u.5
for
100279775


tae-r.2
for
123150746


tae-r.2
for
123159669


tae-r.2
for
123165554


hvu-r.1
for
123410497


sbi-r.1
for
8080033


bdi-r.1
for
100821382


cre-r.1
for
CHLRE_11g467659v5



Ortholog ID: 8476
Species sly sly sot nta nta ath gma gma bra vvi mtr ghi ghi ghi bna bna bna cit osa zma tae tae tae hvu sbi bdi cre
Symbol LOC101250585 LOC101249154 LOC102601226 LOC107782641 LOC107793285 MED6 LOC100792248 LOC106799203 LOC103869179 LOC100253150 LOC25500369 LOC107958045 LOC107916333 LOC107891565 LOC125603028 LOC106446006 LOC106390770 LOC102622399 LOC4340496 LOC100279775 LOC123150746 LOC123159669 LOC123165554 LOC123410497 LOC8080033 LOC100821382 CHLRE_11g467659v5
Function* mediator of RNA polymerase II transcription subunit 6 mediator of RNA polymerase II transcription subunit 6 mediator of RNA polymerase II transcription subunit 6 mediator of RNA polymerase II transcription subunit 6-like mediator of RNA polymerase II transcription subunit 6 RNA polymerase transcriptional regulation mediator-like protein mediator of RNA polymerase II transcription subunit 6 mediator of RNA polymerase II transcription subunit 6 mediator of RNA polymerase II transcription subunit 6 mediator of RNA polymerase II transcription subunit 6 mediator of RNA polymerase II transcription subunit 6 mediator of RNA polymerase II transcription subunit 6 mediator of RNA polymerase II transcription subunit 6 mediator of RNA polymerase II transcription subunit 6 mediator of RNA polymerase II transcription subunit 6-like mediator of RNA polymerase II transcription subunit 6 mediator of RNA polymerase II transcription subunit 6-like mediator of RNA polymerase II transcription subunit 6 mediator of RNA polymerase II transcription subunit 6 uncharacterized LOC100279775 mediator of RNA polymerase II transcription subunit 6 mediator of RNA polymerase II transcription subunit 6 mediator of RNA polymerase II transcription subunit 6 mediator of RNA polymerase II transcription subunit 6 mediator of RNA polymerase II transcription subunit 6 mediator of RNA polymerase II transcription subunit 6 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 5
sot03040 Spliceosome 4
sot04141 Protein processing in endoplasmic reticulum 3
sot03013 Nucleocytoplasmic transport 2
sot03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04136 Autophagy - other 3
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03410 Base excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 6
gma00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04712 Circadian rhythm - plant 3
gma01240 Biosynthesis of cofactors 2
gma00430 Taurine and hypotaurine metabolism 2
gma00460 Cyanoamino acid metabolism 2
gma00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 3
bra03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 3
vvi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00564 Glycerophospholipid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 7
cit03083 Polycomb repressive complex 5
cit04141 Protein processing in endoplasmic reticulum 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03410 Base excision repair 2
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 3
tae03420 Nucleotide excision repair 3
tae04075 Plant hormone signal transduction 2
tae03013 Nucleocytoplasmic transport 2
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 3
tae03420 Nucleotide excision repair 3
tae03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 3
tae03020 RNA polymerase 3
tae03420 Nucleotide excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03020 RNA polymerase 2
hvu03420 Nucleotide excision repair 2
hvu04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101250585 101249154 102601226 107782641 107793285 821689 100792248 106799203 103869179 100253150 25500369 107958045 107916333 107891565 125603028 106446006 106390770 102622399 4340496 100279775 123150746 123159669 123165554 123410497 8080033 100821382 5724354
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