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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101252054   4-coumarate--CoA ligase-like 9 
 sly-r.6   101252054   4-coumarate--CoA ligase-like 9 
 sly-u.5   101266208   4-coumarate--CoA ligase-like 9 
 sot-r.1   102588059   4-coumarate--CoA ligase-like 9 
 sot-r.1   102588483   4-coumarate--CoA ligase-like 9 
 nta-r.1   107819614   4-coumarate--CoA ligase-like 9 
 nta-r.1   107815751   4-coumarate--CoA ligase-like 9 
 nta-r.1   107790326   4-coumarate--CoA ligase-like 9 
 ath-u.5   AT5G63380   AMP-dependent synthetase and ligase family protein 
 gma-u.5   100804044   4-coumarate--CoA ligase-like 9 
 bra-r.6   103855040   4-coumarate--CoA ligase-like 9 
 vvi-u.5   100266547   4-coumarate--CoA ligase-like 9 
 vvi-u.5   100268159   4-coumarate--CoA ligase-like 9 
 ppo-u.5   18103805   4-coumarate--CoA ligase-like 9 
 mtr-u.5   11419136   4-coumarate--CoA ligase-like 9 
 mtr-u.5   11431202   4-coumarate--CoA ligase-like 9 
 mtr-u.5   11414035   4-coumarate--CoA ligase-like 9 
 ghi-r.1   107924212   4-coumarate--CoA ligase-like 9 
 ghi-r.1   107931451   4-coumarate--CoA ligase-like 9 
 ghi-r.1   107948772   4-coumarate--CoA ligase-like 9 
 bna-r.1   125598036   4-coumarate--CoA ligase-like 9 
 bna-r.1   106405347   4-coumarate--CoA ligase-like 9 
 cit-r.1   102626986   4-coumarate--CoA ligase-like 9 
 cit-r.1   102627453   4-coumarate--CoA ligase-like 9 
 cit-r.1   102617041   4-coumarate--CoA ligase-like 9 
 osa-u.5   112935996   4-coumarate--CoA ligase-like 5 
 osa-u.5   9270232   4-coumarate--CoA ligase-like 5 
 zma-u.5   100272376   uncharacterized LOC100272376 
 tae-r.2   123062827   4-coumarate--CoA ligase-like 5 
 tae-r.2   123062828   4-coumarate--CoA ligase-like 5 
 tae-r.2   123071672   4-coumarate--CoA ligase-like 5 
 hvu-r.1   123445032   4-coumarate--CoA ligase-like 5 
 sbi-r.1   8056122   4-coumarate--CoA ligase-like 5 
 bdi-r.1   100846491   4-coumarate--CoA ligase-like 5 

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Top 50 coexpressed genes to 101252054 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101252054 (sly-u.5 coexpression data)

CoexMap"101252054"


slyLOC101252054 | Entrez gene ID : 101252054    
Species sly sot nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 3 2 3 1 1 1 2 1 3 3 2 3 2 1 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly00130 [list] [network] Ubiquinone and other terpenoid-quinone biosynthesis (50 genes)
sly00940 [list] [network] Phenylpropanoid biosynthesis (200 genes)
GO BP
GO CC
GO MF
GO:0016405 [list] [network] CoA-ligase activity  (28 genes)  IEA  
Protein XP_004234005.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 3,  E.R. 2,  nucl 1,  chlo_mito 1,  E.R._vacu 1  (predict for XP_004234005.2)
Subcellular
localization
TargetP
chlo 9  (predict for XP_004234005.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101252054
sly-r.6
for
101252054
sly-u.5
for
101266208
sot-r.1
for
102588059
sot-r.1
for
102588483
nta-r.1
for
107819614
nta-r.1
for
107815751
nta-r.1
for
107790326
ath-u.5
for
AT5G63380
gma-u.5
for
100804044
bra-r.6
for
103855040
vvi-u.5
for
100266547
vvi-u.5
for
100268159
ppo-u.5
for
18103805
mtr-u.5
for
11419136
mtr-u.5
for
11431202
mtr-u.5
for
11414035
ghi-r.1
for
107924212
ghi-r.1
for
107931451
ghi-r.1
for
107948772
bna-r.1
for
125598036
bna-r.1
for
106405347
cit-r.1
for
102626986
cit-r.1
for
102627453
cit-r.1
for
102617041
osa-u.5
for
112935996
osa-u.5
for
9270232
zma-u.5
for
100272376
tae-r.2
for
123062827
tae-r.2
for
123062828
tae-r.2
for
123071672
hvu-r.1
for
123445032
sbi-r.1
for
8056122
bdi-r.1
for
100846491


Ortholog ID: 2766
Species sly sly sot sot nta nta nta ath gma bra vvi vvi ppo ppo ppo mtr mtr mtr ghi ghi ghi bna bna cit cit cit osa osa zma tae tae tae hvu sbi bdi
Symbol LOC101252054 LOC101266208 LOC102588059 LOC102588483 LOC107819614 LOC107815751 LOC107761282 AT5G63380 LOC100784234 LOC103855040 LOC100266547 LOC100242222 LOC7477039 LOC7454537 LOC7454535 LOC11419136 LOC11431202 LOC11414035 LOC107931451 LOC121232052 LOC107912089 LOC125598036 LOC106405347 LOC102626986 LOC102627453 LOC102623270 LOC112935996 LOC9270232 LOC100272376 LOC123062827 LOC123062828 LOC123080020 LOC123445032 LOC8056122 LOC100846491
Function* 4-coumarate--CoA ligase-like 9 4-coumarate--CoA ligase-like 9 4-coumarate--CoA ligase-like 9 4-coumarate--CoA ligase-like 9 4-coumarate--CoA ligase-like 9 4-coumarate--CoA ligase-like 9 4-coumarate--CoA ligase-like 9 AMP-dependent synthetase and ligase family protein 4-coumarate--CoA ligase-like 9 4-coumarate--CoA ligase-like 9 4-coumarate--CoA ligase-like 9 4-coumarate--CoA ligase-like 9 4-coumarate--CoA ligase-like 9 4-coumarate--CoA ligase-like 9 4-coumarate--CoA ligase-like 9 4-coumarate--CoA ligase-like 9 4-coumarate--CoA ligase-like 9 4-coumarate--CoA ligase-like 9 4-coumarate--CoA ligase-like 9 4-coumarate--CoA ligase-like 9 4-coumarate--CoA ligase-like 9 4-coumarate--CoA ligase-like 9 4-coumarate--CoA ligase-like 9 4-coumarate--CoA ligase-like 9 4-coumarate--CoA ligase-like 9 4-coumarate--CoA ligase-like 9 4-coumarate--CoA ligase-like 5 4-coumarate--CoA ligase-like 5 uncharacterized LOC100272376 4-coumarate--CoA ligase-like 5 4-coumarate--CoA ligase-like 5 4-coumarate--CoA ligase-like 5 4-coumarate--CoA ligase-like 5 4-coumarate--CoA ligase-like 5 4-coumarate--CoA ligase-like 5
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00900 Terpenoid backbone biosynthesis 5
sly01200 Carbon metabolism 3
sly00020 Citrate cycle (TCA cycle) 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00910 Nitrogen metabolism 3
sot01310 Nitrogen cycle 3
sot01200 Carbon metabolism 2
sot00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00591 Linoleic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00940 Phenylpropanoid biosynthesis 4
gma00941 Flavonoid biosynthesis 3
gma00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00940 Phenylpropanoid biosynthesis 5
vvi01230 Biosynthesis of amino acids 4
vvi01200 Carbon metabolism 3
vvi00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
vvi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00920 Sulfur metabolism 2
ppo01320 Sulfur cycle 2
ppo01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00940 Phenylpropanoid biosynthesis 4
ppo00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
ppo04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01240 Biosynthesis of cofactors 5
ppo00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ppo00250 Alanine, aspartate and glutamate metabolism 2
ppo00760 Nicotinate and nicotinamide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01230 Biosynthesis of amino acids 3
mtr00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
mtr00940 Phenylpropanoid biosynthesis 2
mtr00030 Pentose phosphate pathway 2
mtr00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00480 Glutathione metabolism 7
mtr00940 Phenylpropanoid biosynthesis 3
mtr00941 Flavonoid biosynthesis 2
mtr00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
mtr00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
ghi00940 Phenylpropanoid biosynthesis 3
ghi00740 Riboflavin metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
ghi00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00250 Alanine, aspartate and glutamate metabolism 6
ghi01230 Biosynthesis of amino acids 6
ghi00270 Cysteine and methionine metabolism 3
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
bna00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
bna00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03018 RNA degradation 2
cit04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01230 Biosynthesis of amino acids 4
cit04120 Ubiquitin mediated proteolysis 2
cit00270 Cysteine and methionine metabolism 2
cit00670 One carbon pool by folate 2
cit00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00592 alpha-Linolenic acid metabolism 3
osa04146 Peroxisome 2
osa00760 Nicotinate and nicotinamide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00591 Linoleic acid metabolism 2
osa00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04814 Motor proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00130 Ubiquinone and other terpenoid-quinone biosynthesis 4
tae00940 Phenylpropanoid biosynthesis 4
tae00190 Oxidative phosphorylation 3
tae04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00130 Ubiquinone and other terpenoid-quinone biosynthesis 4
tae00940 Phenylpropanoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00130 Ubiquinone and other terpenoid-quinone biosynthesis 4
tae00940 Phenylpropanoid biosynthesis 4
tae04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00350 Tyrosine metabolism 2
sbi00360 Phenylalanine metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101252054 101266208 102588059 102588483 107819614 107815751 107761282 836457 100784234 103855040 100266547 100242222 7477039 7454537 7454535 11419136 11431202 11414035 107931451 121232052 107912089 125598036 106405347 102626986 102627453 102623270 112935996 9270232 100272376 123062827 123062828 123080020 123445032 8056122 100846491
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