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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101245066   2-isopropylmalate synthase B 
 sly-u.5   IPMS2   isopropylmalate synthase 
 sly-u.5   104648641   2-isopropylmalate synthase A-like 
 sot-r.1   102601609   2-isopropylmalate synthase B 
 sot-r.1   102593340   2-isopropylmalate synthase A-like 
 sot-r.1   102593662   2-isopropylmalate synthase A-like 
 nta-r.1   107808199   2-isopropylmalate synthase A 
 nta-r.1   107791752   2-isopropylmalate synthase B 
 nta-r.1   107760648   2-isopropylmalate synthase B 
 ath-u.5   MAML-4   methylthioalkylmalate synthase-like 4 
 ath-u.5   IMS1   2-isopropylmalate synthase 1 
 gma-u.5   100788955   2-isopropylmalate synthase 2, chloroplastic 
 gma-u.5   100812918   2-isopropylmalate synthase 2, chloroplastic 
 bra-r.6   103842698   2-isopropylmalate synthase 1, chloroplastic 
 bra-r.6   103872613   2-isopropylmalate synthase 1, chloroplastic 
 vvi-u.5   100249820   2-isopropylmalate synthase A 
 ppo-u.5   7486329   2-isopropylmalate synthase 1, chloroplastic 
 mtr-u.5   11445801   2-isopropylmalate synthase 2, chloroplastic 
 mtr-u.5   25497889   probable 2-isopropylmalate synthase 
 ghi-r.1   107914697   2-isopropylmalate synthase 2, chloroplastic 
 ghi-r.1   107910176   2-isopropylmalate synthase 2, chloroplastic 
 ghi-r.1   107903771   2-isopropylmalate synthase 2, chloroplastic 
 bna-r.1   106346910   2-isopropylmalate synthase 1, chloroplastic-like 
 bna-r.1   106369058   2-isopropylmalate synthase 1, chloroplastic 
 bna-r.1   106427153   2-isopropylmalate synthase 1, chloroplastic 
 cit-r.1   102620455   2-isopropylmalate synthase 1, chloroplastic-like 
 osa-u.5   4351460   2-isopropylmalate synthase A 
 osa-u.5   4349745   2-isopropylmalate synthase A 
 zma-u.5   100281571   uncharacterized LOC100281571 
 zma-u.5   100280499   2-isopropylmalate synthase B 
 zma-u.5   100280189   uncharacterized LOC100280189 
 tae-r.2   123111229   2-isopropylmalate synthase A 
 tae-r.2   123120301   2-isopropylmalate synthase A 
 tae-r.2   123103026   2-isopropylmalate synthase A 
 hvu-r.1   123452967   2-isopropylmalate synthase A-like 
 sbi-r.1   8071409   2-isopropylmalate synthase A 
 sbi-r.1   8085635   2-isopropylmalate synthase A 
 bdi-r.1   100832390   2-isopropylmalate synthase A 
 cre-r.1   CHLRE_06g258733v5   uncharacterized protein 

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Top 50 coexpressed genes to 101245066 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101245066 (sly-u.5 coexpression data)

CoexMap"101252796"


slyLOC101252796 | Entrez gene ID : 101252796      
Species sly sot nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 3 3 3 2 2 2 1 1 2 3 3 1 2 3 3 1 2 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly00290 [list] [network] Valine, leucine and isoleucine biosynthesis (26 genes)
sly00620 [list] [network] Pyruvate metabolism (109 genes)
sly01210 [list] [network] 2-Oxocarboxylic acid metabolism (89 genes)
sly01230 [list] [network] Biosynthesis of amino acids (226 genes)
GO BP
GO:0009098 [list] [network] L-leucine biosynthetic process  (5 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (632 genes)  IEA  
GO MF
GO:0003852 [list] [network] 2-isopropylmalate synthase activity  (4 genes)  IEA  
Protein NP_001306258.1 [sequence] [blastp]
XP_025888053.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  mito 3,  pero 2,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for NP_001306258.1)
chlo 4,  mito 3,  pero 2,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for XP_025888053.1)
Subcellular
localization
TargetP
chlo 7  (predict for NP_001306258.1)
chlo 7  (predict for XP_025888053.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101245066
sly-u.5
for
IPMS2
sly-u.5
for
104648641
sot-r.1
for
102601609
sot-r.1
for
102593340
sot-r.1
for
102593662
nta-r.1
for
107808199
nta-r.1
for
107791752
nta-r.1
for
107760648
ath-u.5
for
MAML-4
ath-u.5
for
IMS1
gma-u.5
for
100788955
gma-u.5
for
100812918
bra-r.6
for
103842698
bra-r.6
for
103872613
vvi-u.5
for
100249820
ppo-u.5
for
7486329
mtr-u.5
for
11445801
mtr-u.5
for
25497889
ghi-r.1
for
107914697
ghi-r.1
for
107910176
ghi-r.1
for
107903771
bna-r.1
for
106346910
bna-r.1
for
106369058
bna-r.1
for
106427153
cit-r.1
for
102620455
osa-u.5
for
4351460
osa-u.5
for
4349745
zma-u.5
for
100281571
zma-u.5
for
100280499
zma-u.5
for
100280189
tae-r.2
for
123111229
tae-r.2
for
123120301
tae-r.2
for
123103026
hvu-r.1
for
123452967
sbi-r.1
for
8071409
sbi-r.1
for
8085635
bdi-r.1
for
100832390
cre-r.1
for
CHLRE_06g258733v5


Ortholog ID: 3861
Species sly sly sot sot sot nta nta nta ath ath gma gma bra bra vvi ppo mtr mtr ghi ghi ghi bna bna bna cit osa osa zma zma zma tae tae hvu sbi sbi bdi cre
Symbol LOC101245066 IPMS2 LOC102593340 LOC102593662 LOC102578565 LOC107791752 LOC107760648 LOC107822963 MAML-4 IMS1 LOC100788955 LOC100812918 LOC103842698 LOC103872613 LOC100249820 LOC7486329 LOC11445801 LOC25497889 LOC107910176 LOC107903771 LOC107887273 LOC106346910 LOC106369058 LOC106427153 LOC102620455 LOC4351460 LOC4349745 LOC100281571 LOC100280499 LOC100280189 LOC123111229 LOC123103026 LOC123452967 LOC8071409 LOC8085635 LOC100832390 CHLRE_06g258733v5
Function* 2-isopropylmalate synthase B isopropylmalate synthase 2-isopropylmalate synthase A-like 2-isopropylmalate synthase A-like 2-isopropylmalate synthase A 2-isopropylmalate synthase B 2-isopropylmalate synthase B 2-isopropylmalate synthase A methylthioalkylmalate synthase-like 4 2-isopropylmalate synthase 1 2-isopropylmalate synthase 2, chloroplastic 2-isopropylmalate synthase 2, chloroplastic 2-isopropylmalate synthase 1, chloroplastic 2-isopropylmalate synthase 1, chloroplastic 2-isopropylmalate synthase A 2-isopropylmalate synthase 1, chloroplastic 2-isopropylmalate synthase 2, chloroplastic probable 2-isopropylmalate synthase 2-isopropylmalate synthase 2, chloroplastic 2-isopropylmalate synthase 2, chloroplastic 2-isopropylmalate synthase 2, chloroplastic 2-isopropylmalate synthase 1, chloroplastic-like 2-isopropylmalate synthase 1, chloroplastic 2-isopropylmalate synthase 1, chloroplastic 2-isopropylmalate synthase 1, chloroplastic-like 2-isopropylmalate synthase A 2-isopropylmalate synthase A uncharacterized LOC100281571 2-isopropylmalate synthase B uncharacterized LOC100280189 2-isopropylmalate synthase A 2-isopropylmalate synthase A 2-isopropylmalate synthase A-like 2-isopropylmalate synthase A 2-isopropylmalate synthase A 2-isopropylmalate synthase A uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00970 Aminoacyl-tRNA biosynthesis 4
sly01210 2-Oxocarboxylic acid metabolism 3
sly01230 Biosynthesis of amino acids 3
sly00290 Valine, leucine and isoleucine biosynthesis 2
sly03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00500 Starch and sucrose metabolism 3
sly00310 Lysine degradation 2
sly01240 Biosynthesis of cofactors 2
sly00620 Pyruvate metabolism 2
sly01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00290 Valine, leucine and isoleucine biosynthesis 4
sot01210 2-Oxocarboxylic acid metabolism 4
sot01230 Biosynthesis of amino acids 4
sot00620 Pyruvate metabolism 3
sot00100 Steroid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00290 Valine, leucine and isoleucine biosynthesis 4
sot01210 2-Oxocarboxylic acid metabolism 4
sot01230 Biosynthesis of amino acids 4
sot00620 Pyruvate metabolism 3
sot00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00280 Valine, leucine and isoleucine degradation 4
sot00620 Pyruvate metabolism 3
sot01210 2-Oxocarboxylic acid metabolism 3
sot00640 Propanoate metabolism 2
sot00785 Lipoic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01230 Biosynthesis of amino acids 10
nta00270 Cysteine and methionine metabolism 5
nta00290 Valine, leucine and isoleucine biosynthesis 4
nta01210 2-Oxocarboxylic acid metabolism 4
nta00480 Glutathione metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01230 Biosynthesis of amino acids 13
nta00270 Cysteine and methionine metabolism 6
nta00290 Valine, leucine and isoleucine biosynthesis 4
nta01210 2-Oxocarboxylic acid metabolism 4
nta00260 Glycine, serine and threonine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 5
nta00290 Valine, leucine and isoleucine biosynthesis 2
nta00620 Pyruvate metabolism 2
nta01210 2-Oxocarboxylic acid metabolism 2
nta01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01230 Biosynthesis of amino acids 14
ath01210 2-Oxocarboxylic acid metabolism 10
ath00290 Valine, leucine and isoleucine biosynthesis 6
ath00660 C5-Branched dibasic acid metabolism 3
ath00300 Lysine biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01210 2-Oxocarboxylic acid metabolism 4
ath01230 Biosynthesis of amino acids 4
ath00290 Valine, leucine and isoleucine biosynthesis 3
ath00970 Aminoacyl-tRNA biosynthesis 2
ath00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01210 2-Oxocarboxylic acid metabolism 10
gma01230 Biosynthesis of amino acids 10
gma00290 Valine, leucine and isoleucine biosynthesis 7
gma00270 Cysteine and methionine metabolism 4
gma00920 Sulfur metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 6
gma01210 2-Oxocarboxylic acid metabolism 6
gma01230 Biosynthesis of amino acids 6
gma00290 Valine, leucine and isoleucine biosynthesis 5
gma00010 Glycolysis / Gluconeogenesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 3
vvi00970 Aminoacyl-tRNA biosynthesis 2
vvi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01230 Biosynthesis of amino acids 7
ppo00290 Valine, leucine and isoleucine biosynthesis 5
ppo01210 2-Oxocarboxylic acid metabolism 5
ppo00770 Pantothenate and CoA biosynthesis 4
ppo00650 Butanoate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01230 Biosynthesis of amino acids 4
mtr03010 Ribosome 3
mtr00970 Aminoacyl-tRNA biosynthesis 3
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01230 Biosynthesis of amino acids 11
ghi00290 Valine, leucine and isoleucine biosynthesis 9
ghi01210 2-Oxocarboxylic acid metabolism 9
ghi00770 Pantothenate and CoA biosynthesis 5
ghi00230 Purine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01230 Biosynthesis of amino acids 13
ghi00290 Valine, leucine and isoleucine biosynthesis 11
ghi01210 2-Oxocarboxylic acid metabolism 11
ghi00770 Pantothenate and CoA biosynthesis 7
ghi00620 Pyruvate metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01230 Biosynthesis of amino acids 13
ghi00290 Valine, leucine and isoleucine biosynthesis 11
ghi01210 2-Oxocarboxylic acid metabolism 11
ghi00770 Pantothenate and CoA biosynthesis 7
ghi00620 Pyruvate metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00290 Valine, leucine and isoleucine biosynthesis 4
bna00620 Pyruvate metabolism 4
bna01210 2-Oxocarboxylic acid metabolism 4
bna01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00290 Valine, leucine and isoleucine biosynthesis 4
bna00620 Pyruvate metabolism 4
bna01210 2-Oxocarboxylic acid metabolism 4
bna01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00290 Valine, leucine and isoleucine biosynthesis 4
bna00620 Pyruvate metabolism 4
bna01210 2-Oxocarboxylic acid metabolism 4
bna01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00970 Aminoacyl-tRNA biosynthesis 5
osa01230 Biosynthesis of amino acids 5
osa01210 2-Oxocarboxylic acid metabolism 3
osa01200 Carbon metabolism 3
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00970 Aminoacyl-tRNA biosynthesis 9
osa01230 Biosynthesis of amino acids 4
osa03013 Nucleocytoplasmic transport 2
osa03040 Spliceosome 2
osa00290 Valine, leucine and isoleucine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 5
zma00290 Valine, leucine and isoleucine biosynthesis 2
zma00620 Pyruvate metabolism 2
zma01210 2-Oxocarboxylic acid metabolism 2
zma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00280 Valine, leucine and isoleucine degradation 10
zma01210 2-Oxocarboxylic acid metabolism 5
zma00640 Propanoate metabolism 3
zma01200 Carbon metabolism 3
zma00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 5
zma00290 Valine, leucine and isoleucine biosynthesis 4
zma01210 2-Oxocarboxylic acid metabolism 4
zma01230 Biosynthesis of amino acids 4
zma00770 Pantothenate and CoA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01230 Biosynthesis of amino acids 10
tae00290 Valine, leucine and isoleucine biosynthesis 9
tae01210 2-Oxocarboxylic acid metabolism 9
tae00970 Aminoacyl-tRNA biosynthesis 7
tae00660 C5-Branched dibasic acid metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01230 Biosynthesis of amino acids 11
tae00290 Valine, leucine and isoleucine biosynthesis 8
tae01210 2-Oxocarboxylic acid metabolism 8
tae00660 C5-Branched dibasic acid metabolism 5
tae00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01230 Biosynthesis of amino acids 6
hvu00220 Arginine biosynthesis 4
hvu00250 Alanine, aspartate and glutamate metabolism 3
hvu01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00290 Valine, leucine and isoleucine biosynthesis 2
sbi00620 Pyruvate metabolism 2
sbi01210 2-Oxocarboxylic acid metabolism 2
sbi01230 Biosynthesis of amino acids 2
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00290 Valine, leucine and isoleucine biosynthesis 2
sbi00620 Pyruvate metabolism 2
sbi01210 2-Oxocarboxylic acid metabolism 2
sbi01230 Biosynthesis of amino acids 2
sbi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01230 Biosynthesis of amino acids 4
bdi03008 Ribosome biogenesis in eukaryotes 2
bdi00290 Valine, leucine and isoleucine biosynthesis 2
bdi01210 2-Oxocarboxylic acid metabolism 2
bdi00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01230 Biosynthesis of amino acids 6
cre00400 Phenylalanine, tyrosine and tryptophan biosynthesis 5
cre00970 Aminoacyl-tRNA biosynthesis 4
cre00350 Tyrosine metabolism 2
cre00360 Phenylalanine metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101245066 101251907 102593340 102593662 102578565 107791752 107760648 107822963 838431 843742 100788955 100812918 103842698 103872613 100249820 7486329 11445801 25497889 107910176 107903771 107887273 106346910 106369058 106427153 102620455 4351460 4349745 100281571 100280499 100280189 123111229 123103026 123452967 8071409 8085635 100832390 5722076
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