ATTED-II : GeneCoexpression result

Species	Gene	Description
sly-u.5	101252831	splicing factor Cactin
sly-r.6	101252831	splicing factor Cactin
sly-m.5	101252831	splicing factor Cactin
ath-u.5	AT1G03910	cactus-binding carboxy-terminal, cactin
gma-u.5	100805202	cactin
gma-u.5	100780087	cactin
gma-u.5	100775485	cactin
vvi-u.5	100245238	splicing factor Cactin
ppo-u.5	18100098	cactin
mtr-u.5	11429905	cactin
mtr-u.5	11425048	cactin
osa-u.5	9268667	splicing factor Cactin
zma-u.5	100382147	Cactin

functional annotation

KEGG

GO BP

GO:0045292 [list] [network] mRNA cis splicing, via spliceosome

(19 genes)

IEA

GO CC

GO:0005681 [list] [network] spliceosomal complex	(144 genes)	IEA
GO:0005737 [list] [network] cytoplasm	(5127 genes)	IEA

GO MF

GO:0005515 [list] [network] protein binding

(3982 genes)

IEA

Protein

XP_025888925.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 4, chlo 4, mito 1

(predict for XP_025888925.1)

Subcellular
localization
TargetP

chlo 9

(predict for XP_025888925.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sly-u.5 for 101252831	sly-r.6 for 101252831	sly-m.5 for 101252831	ath-u.5 for AT1G03910	gma-u.5 for 100805202	gma-u.5 for 100780087	gma-u.5 for 100775485	vvi-u.5 for 100245238	ppo-u.5 for 18100098	mtr-u.5 for 11429905	mtr-u.5 for 11425048	osa-u.5 for 9268667	zma-u.5 for 100382147

Ortholog ID: 8259

Species

sly

sot

nta

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

splicing factor Cactin

cactin

splicing factor Cactin

splicing factor Cactin-like

cactus-binding carboxy-terminal, cactin

cactin

splicing factor Cactin

cactin

cactin-like

cactin

splicing factor Cactin

Cactin

cactin

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	5
nta04120	Ubiquitin mediated proteolysis	2
nta04141	Protein processing in endoplasmic reticulum	2
nta03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	5
nta04120	Ubiquitin mediated proteolysis	2
nta04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03013	Nucleocytoplasmic transport	2
gma03015	mRNA surveillance pathway	2
gma03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03040	Spliceosome	3
bra03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03040	Spliceosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	6
bna03015	mRNA surveillance pathway	2
bna03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	9
bna03015	mRNA surveillance pathway	2
bna03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03013	Nucleocytoplasmic transport	2
osa03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03013	Nucleocytoplasmic transport	5
tae03040	Spliceosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03013	Nucleocytoplasmic transport	4
tae03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03040	Spliceosome	4
bdi03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03050	Proteasome	4
cre03040	Spliceosome	2

Expression

Expression pattern

Entrez Gene ID^*

101252831

102601870

107800073

107793315

839371

100780087

100775485

103843679

103844302

100245238

18100098

11429905

11425048

107948128

107899511

106370956

106369262

102614062

9268667

100382147

123113745

123123256

123452778

8061158

100830256

5720857

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 101252831 (sly-u.5 coexpression data)

Top 50 enrichment test to 101252831 (sly-u.5 coexpression data)


Species	sly	ath	gma	vvi	ppo	mtr	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	3	1	3	1	1	2	1	1	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 101252831 (sly-u.5 coexpression data)

Top 50 enrichment test to 101252831 (sly-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**