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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5  LE25  Protein LE25 
 sly-r.6  LE25  Protein LE25 
 ath-u.5  LEA4-5  Late Embryogenesis Abundant 4-5 
 gma-u.5  PM1  late embryogenesis abundant group 4 protein PM1 
 gma-u.5  PM9  late embryogenesis abundant group 4 protein PM9 
 gma-u.5  100781445  18 kDa seed maturation protein 
 vvi-u.5  100257252  18 kDa seed maturation protein 
 vvi-u.5  100262363  11 kDa late embryogenesis abundant protein 
 vvi-u.5  100267524  11 kDa late embryogenesis abundant protein 
 ppo-u.5  7483980  18 kDa seed maturation protein 
 mtr-u.5  11437936  18 kDa seed maturation protein 
 mtr-u.5  11421661  18 kDa seed maturation protein 
 osa-u.5  4345287  11 kDa late embryogenesis abundant protein 
 zma-u.5  103641198  11 kDa late embryogenesis abundant protein-like 
 zma-u.5  103643070  11 kDa late embryogenesis abundant protein 
 zma-u.5  103638344  protein LE25 

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Top 50 coexpressed genes to LE25 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to LE25 (sly-u.5 coexpression data)

CoexMap"101253038"


slyLE25 | Entrez gene ID : 101253038
Species sly ath gma vvi ppo mtr osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 2 1 3 3 1 2 1 3 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009793 [list] [network] embryo development ending in seed dormancy  (18 genes)  IEA  
GO CC
GO MF
Protein NP_001296314.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  mito 4  (predict for NP_001296314.1)
Subcellular
localization
TargetP
other 7,  chlo 3  (predict for NP_001296314.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

sly-u.5
for
LE25


sly-r.6
for
LE25


ath-u.5
for
LEA4-5


gma-u.5
for
PM1


gma-u.5
for
PM9


gma-u.5
for
100781445


vvi-u.5
for
100257252


vvi-u.5
for
100262363


vvi-u.5
for
100267524


ppo-u.5
for
7483980


mtr-u.5
for
11437936


mtr-u.5
for
11421661


osa-u.5
for
4345287


zma-u.5
for
103641198


zma-u.5
for
103643070


zma-u.5
for
103638344



Ortholog ID: 1551
Species sot nta ath gma gma bra bra vvi vvi ppo mtr mtr bna cit osa zma zma tae tae hvu hvu bdi bdi
Symbol LOC102604813 LOC107780126 LEA4-5 PM9 LOC100781445 LOC103855696 LOC103847016 LOC100267524 LOC100262363 LOC7483980 LOC11437338 LOC11437936 LOC106413949 LOC102628020 LOC4345287 LOC103638344 LOC103641198 LOC123134214 LOC123116040 LOC123395358 LOC123411253 LOC100845700 LOC100827577
Function* 18 kDa seed maturation protein-like protein LE25-like Late Embryogenesis Abundant 4-5 late embryogenesis abundant group 4 protein PM9 18 kDa seed maturation protein late embryogenesis abundant protein 46 late embryogenesis abundant protein 46 11 kDa late embryogenesis abundant protein 11 kDa late embryogenesis abundant protein 18 kDa seed maturation protein 18 kDa seed maturation protein 18 kDa seed maturation protein late embryogenesis abundant protein 46-like late embryogenesis abundant protein 46-like 11 kDa late embryogenesis abundant protein protein LE25 11 kDa late embryogenesis abundant protein-like 11 kDa late embryogenesis abundant protein-like 11 kDa late embryogenesis abundant protein uncharacterized LOC123395358 protein LE25-like uncharacterized LOC100845700 11 kDa late embryogenesis abundant protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00052 Galactose metabolism 2
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04016 MAPK signaling pathway - plant 2
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 3
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01200 Carbon metabolism 2
vvi00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04016 MAPK signaling pathway - plant 2
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00785 Lipoic acid metabolism 3
bna01240 Biosynthesis of cofactors 3
bna04016 MAPK signaling pathway - plant 2
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00052 Galactose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04626 Plant-pathogen interaction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04016 MAPK signaling pathway - plant 2
hvu04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102604813 107780126 830565 547921 100781445 103855696 103847016 100267524 100262363 7483980 11437338 11437936 106413949 102628020 4345287 103638344 103641198 123134214 123116040 123395358 123411253 100845700 100827577
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