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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101253278   APO protein 4, mitochondrial 
 sly-r.6   101253278   APO protein 4, mitochondrial 
 sly-m.5   101253278   APO protein 4, mitochondrial 
 sot-r.1   102580815   APO protein 4, mitochondrial 
 nta-r.1   107826734   APO protein 4, mitochondrial-like 
 nta-r.1   107803441   APO protein 4, mitochondrial 
 ath-u.5   APO4   APO RNA-binding protein (DUF794) 
 gma-u.5   100782103   APO protein 4, mitochondrial 
 bra-r.6   103869148   APO protein 4, mitochondrial 
 vvi-u.5   100263618   APO protein 4, mitochondrial 
 ppo-u.5   18106980   APO protein 4, mitochondrial 
 mtr-u.5   11416047   APO protein 4, mitochondrial 
 ghi-r.1   107916661   APO protein 4, mitochondrial 
 ghi-r.1   107912710   APO protein 4, mitochondrial 
 bna-r.1   106403071   APO protein 4, mitochondrial-like 
 bna-r.1   106449537   APO protein 4, mitochondrial-like 
 cit-r.1   102616356   APO protein 4, mitochondrial 
 osa-u.5   4337079   APO protein 4, mitochondrial 
 zma-u.5   100276440   APO protein 4 mitochondrial 
 tae-r.2   123190517   APO protein 4, mitochondrial 
 tae-r.2   123054670   APO protein 4, mitochondrial 
 tae-r.2   123046826   APO protein 4, mitochondrial 
 hvu-r.1   123427926   APO protein 4, mitochondrial 
 sbi-r.1   8074741   APO protein 4, mitochondrial 

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Top 50 coexpressed genes to 101253278 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101253278 (sly-u.5 coexpression data)

CoexMap"101253278"


slyLOC101253278 | Entrez gene ID : 101253278      
Species sly sot nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi cre bdi
Paralog 3 1 2 1 1 1 1 1 1 2 2 1 1 1 3 1 1 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0043161 [list] [network] proteasome-mediated ubiquitin-dependent protein catabolic process  (132 genes)  IEA  
GO CC
GO:0005654 [list] [network] nucleoplasm  (193 genes)  IEA  
GO:0005829 [list] [network] cytosol  (916 genes)  IEA  
GO MF
GO:0070628 [list] [network] proteasome binding  (12 genes)  IEA  
GO:0031593 [list] [network] polyubiquitin modification-dependent protein binding  (35 genes)  IEA  
GO:0043130 [list] [network] ubiquitin binding  (53 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1208 genes)  IEA  
Protein XP_004238237.3 [sequence] [blastp]
XP_069153548.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  cyto 4,  nucl 1,  plas 1,  cysk 1,  cysk_nucl 1,  nucl_plas 1,  cysk_plas 1  (predict for XP_004238237.3)
cyto 8,  cyto_E.R. 4,  plas 1,  cysk 1,  cysk_plas 1  (predict for XP_069153548.1)
Subcellular
localization
TargetP
scret 7  (predict for XP_004238237.3)
scret 6,  other 5  (predict for XP_069153548.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101253278
sly-r.6
for
101253278
sly-m.5
for
101253278
sot-r.1
for
102580815
nta-r.1
for
107826734
nta-r.1
for
107803441
ath-u.5
for
APO4
gma-u.5
for
100782103
bra-r.6
for
103869148
vvi-u.5
for
100263618
ppo-u.5
for
18106980
mtr-u.5
for
11416047
ghi-r.1
for
107916661
ghi-r.1
for
107912710
bna-r.1
for
106403071
bna-r.1
for
106449537
cit-r.1
for
102616356
osa-u.5
for
4337079
zma-u.5
for
100276440
tae-r.2
for
123190517
tae-r.2
for
123054670
tae-r.2
for
123046826
hvu-r.1
for
123427926
sbi-r.1
for
8074741


Ortholog ID: 11320
Species sly sot nta nta ath gma bra vvi ppo mtr ghi ghi bna bna cit osa zma tae tae tae hvu sbi
Symbol LOC101253278 LOC102580815 LOC107826734 LOC107803441 APO4 LOC100782103 LOC103869148 LOC100263618 LOC18106980 LOC11416047 LOC107916661 LOC107912710 LOC106403071 LOC106449537 LOC102616356 LOC4337079 LOC100276440 LOC123190517 LOC123054670 LOC123046826 LOC123427926 LOC8074741
Function* APO protein 4, mitochondrial APO protein 4, mitochondrial APO protein 4, mitochondrial-like APO protein 4, mitochondrial APO RNA-binding protein (DUF794) APO protein 4, mitochondrial APO protein 4, mitochondrial APO protein 4, mitochondrial APO protein 4, mitochondrial APO protein 4, mitochondrial APO protein 4, mitochondrial APO protein 4, mitochondrial APO protein 4, mitochondrial-like APO protein 4, mitochondrial-like APO protein 4, mitochondrial APO protein 4, mitochondrial APO protein 4 mitochondrial APO protein 4, mitochondrial APO protein 4, mitochondrial APO protein 4, mitochondrial APO protein 4, mitochondrial APO protein 4, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01240 Biosynthesis of cofactors 3
mtr00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 4
osa03010 Ribosome 2
osa03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 6
zma03013 Nucleocytoplasmic transport 4
zma03015 mRNA surveillance pathway 2
zma00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
tae03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00290 Valine, leucine and isoleucine biosynthesis 2
hvu00770 Pantothenate and CoA biosynthesis 2
hvu01210 2-Oxocarboxylic acid metabolism 2
hvu01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101253278 102580815 107826734 107803441 821728 100782103 103869148 100263618 18106980 11416047 107916661 107912710 106403071 106449537 102616356 4337079 100276440 123190517 123054670 123046826 123427926 8074741
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