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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101254321   probable transcriptional regulatory protein At2g25830 
 sly-r.6   101254321   probable transcriptional regulatory protein At2g25830 
 sot-r.1   102592508   probable transcriptional regulatory protein At2g25830 
 nta-r.1   107812795   putative transcriptional regulatory protein At2g25830 
 nta-r.1   107821950   putative transcriptional regulatory protein At2g25830 
 ath-u.5   AT2G25830   YebC-like protein 
 gma-u.5   100818936   probable transcriptional regulatory protein At2g25830 
 gma-u.5   100795367   probable transcriptional regulatory protein At2g25830 
 bra-r.6   103864693   probable transcriptional regulatory protein At2g25830 
 vvi-u.5   100245721   probable transcriptional regulatory protein At2g25830 
 ppo-u.5   7470742   probable transcriptional regulatory protein At2g25830 
 mtr-u.5   11425882   probable transcriptional regulatory protein At2g25830 
 ghi-r.1   107906960   probable transcriptional regulatory protein At2g25830 
 bna-r.1   106400870   probable transcriptional regulatory protein At2g25830 
 bna-r.1   106446808   probable transcriptional regulatory protein At2g25830 
 cit-r.1   102608524   probable transcriptional regulatory protein At2g25830 
 osa-u.5   4339344   probable transcriptional regulatory protein At2g25830 
 zma-u.5   100273797   putative transcriptional regulatory protein 
 tae-r.2   123140492   probable transcriptional regulatory protein At2g25830 
 tae-r.2   123182661   probable transcriptional regulatory protein At2g25830 
 tae-r.2   123063452   probable transcriptional regulatory protein At2g25830 
 hvu-r.1   123446988   probable transcriptional regulatory protein At2g25830 
 sbi-r.1   8067532   probable transcriptional regulatory protein At2g25830 
 bdi-r.1   100825410   probable transcriptional regulatory protein At2g25830 
 cre-r.1   CHLRE_02g097550v5   uncharacterized protein 

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Top 50 coexpressed genes to 101254321 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101254321 (sly-u.5 coexpression data)

CoexMap"101254321"


slyLOC101254321 | Entrez gene ID : 101254321      
Species sly sot nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 2 1 2 1 2 1 1 1 1 1 2 1 1 1 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0009507 [list] [network] chloroplast  (632 genes)  IEA  
GO MF
Protein XP_004245165.2 [sequence] [blastp]
XP_010325089.2 [sequence] [blastp]
XP_019070953.2 [sequence] [blastp]
XP_069144229.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  mito 3  (predict for XP_004245165.2)
chlo 7,  mito 3  (predict for XP_010325089.2)
mito 6,  chlo 1,  cyto 1  (predict for XP_019070953.2)
mito 6,  chlo 1,  cyto 1  (predict for XP_069144229.1)
Subcellular
localization
TargetP
chlo 6,  mito 4  (predict for XP_004245165.2)
chlo 6,  mito 4  (predict for XP_010325089.2)
other 6,  mito 4  (predict for XP_019070953.2)
other 6,  mito 4  (predict for XP_069144229.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101254321
sly-r.6
for
101254321
sot-r.1
for
102592508
nta-r.1
for
107812795
nta-r.1
for
107821950
ath-u.5
for
AT2G25830
gma-u.5
for
100818936
gma-u.5
for
100795367
bra-r.6
for
103864693
vvi-u.5
for
100245721
ppo-u.5
for
7470742
mtr-u.5
for
11425882
ghi-r.1
for
107906960
bna-r.1
for
106400870
bna-r.1
for
106446808
cit-r.1
for
102608524
osa-u.5
for
4339344
zma-u.5
for
100273797
tae-r.2
for
123140492
tae-r.2
for
123182661
tae-r.2
for
123063452
hvu-r.1
for
123446988
sbi-r.1
for
8067532
bdi-r.1
for
100825410
cre-r.1
for
CHLRE_02g097550v5


Ortholog ID: 10676
Species sly sot nta nta ath gma gma bra vvi ppo mtr ghi bna bna cit osa zma tae tae tae hvu sbi bdi cre
Symbol LOC101254321 LOC102592508 LOC107812795 LOC107821950 AT2G25830 LOC100818936 LOC100795367 LOC103864693 LOC100245721 LOC7470742 LOC11425882 LOC107906960 LOC106400870 LOC106446808 LOC102608524 LOC4339344 LOC100273797 LOC123140492 LOC123182661 LOC123063452 LOC123446988 LOC8067532 LOC100825410 CHLRE_02g097550v5
Function* probable transcriptional regulatory protein At2g25830 probable transcriptional regulatory protein At2g25830 putative transcriptional regulatory protein At2g25830 putative transcriptional regulatory protein At2g25830 YebC-like protein probable transcriptional regulatory protein At2g25830 probable transcriptional regulatory protein At2g25830 probable transcriptional regulatory protein At2g25830 probable transcriptional regulatory protein At2g25830 probable transcriptional regulatory protein At2g25830 probable transcriptional regulatory protein At2g25830 probable transcriptional regulatory protein At2g25830 probable transcriptional regulatory protein At2g25830 probable transcriptional regulatory protein At2g25830 probable transcriptional regulatory protein At2g25830 probable transcriptional regulatory protein At2g25830 putative transcriptional regulatory protein probable transcriptional regulatory protein At2g25830 probable transcriptional regulatory protein At2g25830 probable transcriptional regulatory protein At2g25830 probable transcriptional regulatory protein At2g25830 probable transcriptional regulatory protein At2g25830 probable transcriptional regulatory protein At2g25830 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 5
ath03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00970 Aminoacyl-tRNA biosynthesis 5
bra03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 2
ppo01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 6
ghi03082 ATP-dependent chromatin remodeling 2
ghi03083 Polycomb repressive complex 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 2
bna04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 3
osa00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 6
tae00450 Selenocompound metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 3
tae00450 Selenocompound metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 8
tae00450 Selenocompound metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01232 Nucleotide metabolism 3
hvu00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00330 Arginine and proline metabolism 2
sbi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00860 Porphyrin metabolism 3
cre00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
cre01230 Biosynthesis of amino acids 2
cre00970 Aminoacyl-tRNA biosynthesis 2
cre01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101254321 102592508 107812795 107821950 817125 100818936 100795367 103864693 100245721 7470742 11425882 107906960 106400870 106446808 102608524 4339344 100273797 123140492 123182661 123063452 123446988 8067532 100825410 5725390
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