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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   MPPDC1   mevalonate diphosphate decarboxylase 1 
 sly-r.6   MPPDC1   mevalonate diphosphate decarboxylase 1 
 sly-u.5   MDC   mevalonate disphosphate decarboxylase 2 
 ath-u.5   MVD1   mevalonate diphosphate decarboxylase 1 
 ath-u.5   AT3G54250   GHMP kinase family protein 
 gma-u.5   100785593   diphosphomevalonate decarboxylase MVD2, peroxisomal 
 gma-u.5   100800990   diphosphomevalonate decarboxylase MVD2, peroxisomal 
 vvi-u.5   100251686   diphosphomevalonate decarboxylase 1 
 ppo-u.5   7477172   diphosphomevalonate decarboxylase MVD2, peroxisomal 
 ppo-u.5   7490899   diphosphomevalonate decarboxylase MVD2, peroxisomal 
 mtr-u.5   25485588   diphosphomevalonate decarboxylase MVD2, peroxisomal 
 osa-u.5   4328034   diphosphomevalonate decarboxylase 2 
 zma-u.5   103643980   diphosphomevalonate decarboxylase MVD2, peroxisomal 
 zma-u.5   100282878   Diphosphomevalonate decarboxylase MVD2 

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Top 50 coexpressed genes to MPPDC1 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to MPPDC1 (sly-u.5 coexpression data)

CoexMap"101254587"


slyMPPDC1 | Entrez gene ID : 101254587    
Species sly ath gma vvi ppo mtr osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 3 2 2 1 2 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly00900 [list] [network] Terpenoid backbone biosynthesis (57 genes)
GO BP
GO:0019287 [list] [network] isopentenyl diphosphate biosynthetic process, mevalonate pathway  (5 genes)  IEA  
GO:0008299 [list] [network] isoprenoid biosynthetic process  (124 genes)  IEA  
GO CC
GO:0005829 [list] [network] cytosol  (916 genes)  IEA  
GO MF
GO:0004163 [list] [network] diphosphomevalonate decarboxylase activity  (2 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (1916 genes)  IEA  
Protein XP_004236810.1 [sequence] [blastp]
Subcellular
localization
wolf
cysk 5,  cyto 2,  chlo 1,  cyto_nucl 1  (predict for XP_004236810.1)
Subcellular
localization
TargetP
other 8  (predict for XP_004236810.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
MPPDC1

.
sly-r.6
for
MPPDC1

.
sly-u.5
for
MDC

.
ath-u.5
for
MVD1

.
ath-u.5
for
AT3G54250

.
gma-u.5
for
100785593

.
gma-u.5
for
100800990

.
vvi-u.5
for
100251686

.
ppo-u.5
for
7477172

.
ppo-u.5
for
7490899

.
mtr-u.5
for
25485588

.
osa-u.5
for
4328034

.
zma-u.5
for
103643980

.
zma-u.5
for
100282878

.


Ortholog ID: 5275
Species ath ath gma gma sly sly osa zma zma bra bra vvi ppo ppo mtr tae tae hvu hvu ghi ghi bna bna sbi sot sot cit bdi nta nta
Symbol AT3G54250 MVD1 LOC100785593 LOC100800990 MPPDC1 MDC LOC4328034 LOC103643980 LOC100282878 LOC103841340 LOC103863245 LOC100251686 LOC7490899 LOC7477172 LOC25485588 LOC123123228 LOC123066929 LOC123452736 LOC123441095 LOC107920209 LOC107933302 LOC106431384 LOC106431385 LOC8083094 LOC102604354 LOC102581346 LOC102616609 LOC100830501 LOC107817230 LOC107759723
Function* GHMP kinase family protein mevalonate diphosphate decarboxylase 1 diphosphomevalonate decarboxylase MVD2, peroxisomal diphosphomevalonate decarboxylase MVD2, peroxisomal mevalonate diphosphate decarboxylase 1 mevalonate disphosphate decarboxylase 2 diphosphomevalonate decarboxylase 2 diphosphomevalonate decarboxylase MVD2, peroxisomal Diphosphomevalonate decarboxylase MVD2 diphosphomevalonate decarboxylase MVD2, peroxisomal diphosphomevalonate decarboxylase MVD2, peroxisomal diphosphomevalonate decarboxylase 1 diphosphomevalonate decarboxylase MVD2, peroxisomal diphosphomevalonate decarboxylase MVD2, peroxisomal diphosphomevalonate decarboxylase MVD2, peroxisomal diphosphomevalonate decarboxylase 2 diphosphomevalonate decarboxylase MVD2, peroxisomal diphosphomevalonate decarboxylase MVD2, peroxisomal-like diphosphomevalonate decarboxylase MVD2, peroxisomal-like diphosphomevalonate decarboxylase MVD2, peroxisomal diphosphomevalonate decarboxylase MVD2, peroxisomal diphosphomevalonate decarboxylase MVD2, peroxisomal diphosphomevalonate decarboxylase MVD2, peroxisomal diphosphomevalonate decarboxylase MVD2, peroxisomal diphosphomevalonate decarboxylase-like diphosphomevalonate decarboxylase-like diphosphomevalonate decarboxylase MVD2, peroxisomal-like diphosphomevalonate decarboxylase MVD2, peroxisomal diphosphomevalonate decarboxylase 1 diphosphomevalonate decarboxylase 2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00900 Terpenoid backbone biosynthesis 3
ath00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00900 Terpenoid backbone biosynthesis 5
ath00020 Citrate cycle (TCA cycle) 4
ath00620 Pyruvate metabolism 4
ath00280 Valine, leucine and isoleucine degradation 2
ath00650 Butanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00900 Terpenoid backbone biosynthesis 5
gma00280 Valine, leucine and isoleucine degradation 3
gma00650 Butanoate metabolism 3
gma04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00900 Terpenoid backbone biosynthesis 12
gma00280 Valine, leucine and isoleucine degradation 3
gma00650 Butanoate metabolism 3
gma00020 Citrate cycle (TCA cycle) 2
gma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 3
sly00190 Oxidative phosphorylation 3
sly01230 Biosynthesis of amino acids 2
sly00900 Terpenoid backbone biosynthesis 2
sly00020 Citrate cycle (TCA cycle) 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00900 Terpenoid backbone biosynthesis 8
sly01200 Carbon metabolism 4
sly00020 Citrate cycle (TCA cycle) 4
sly00280 Valine, leucine and isoleucine degradation 3
sly00650 Butanoate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01212 Fatty acid metabolism 7
osa00620 Pyruvate metabolism 7
osa01200 Carbon metabolism 7
osa00061 Fatty acid biosynthesis 6
osa00010 Glycolysis / Gluconeogenesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00900 Terpenoid backbone biosynthesis 5
zma00280 Valine, leucine and isoleucine degradation 3
zma00650 Butanoate metabolism 3
zma00010 Glycolysis / Gluconeogenesis 3
zma00061 Fatty acid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00061 Fatty acid biosynthesis 6
zma01212 Fatty acid metabolism 6
zma01240 Biosynthesis of cofactors 4
zma00780 Biotin metabolism 3
zma00100 Steroid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00620 Pyruvate metabolism 3
bra01200 Carbon metabolism 3
bra00061 Fatty acid biosynthesis 2
bra00640 Propanoate metabolism 2
bra01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00280 Valine, leucine and isoleucine degradation 2
vvi00900 Terpenoid backbone biosynthesis 2
vvi00310 Lysine degradation 2
vvi00380 Tryptophan metabolism 2
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 5
ppo00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 5
ppo00030 Pentose phosphate pathway 3
ppo00480 Glutathione metabolism 3
ppo00900 Terpenoid backbone biosynthesis 3
ppo01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00900 Terpenoid backbone biosynthesis 7
mtr00020 Citrate cycle (TCA cycle) 3
mtr00280 Valine, leucine and isoleucine degradation 2
mtr00650 Butanoate metabolism 2
mtr00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00010 Glycolysis / Gluconeogenesis 8
tae00020 Citrate cycle (TCA cycle) 8
tae00620 Pyruvate metabolism 8
tae00785 Lipoic acid metabolism 8
tae01200 Carbon metabolism 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00900 Terpenoid backbone biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00020 Citrate cycle (TCA cycle) 2
hvu00190 Oxidative phosphorylation 2
hvu01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 3
hvu00600 Sphingolipid metabolism 2
hvu04144 Endocytosis 2
hvu00030 Pentose phosphate pathway 2
hvu00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00900 Terpenoid backbone biosynthesis 12
ghi00071 Fatty acid degradation 2
ghi00280 Valine, leucine and isoleucine degradation 2
ghi00310 Lysine degradation 2
ghi00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00900 Terpenoid backbone biosynthesis 12
ghi00071 Fatty acid degradation 2
ghi00280 Valine, leucine and isoleucine degradation 2
ghi00310 Lysine degradation 2
ghi00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00900 Terpenoid backbone biosynthesis 4
bna00040 Pentose and glucuronate interconversions 2
bna00053 Ascorbate and aldarate metabolism 2
bna00520 Amino sugar and nucleotide sugar metabolism 2
bna01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00900 Terpenoid backbone biosynthesis 4
bna00040 Pentose and glucuronate interconversions 2
bna00053 Ascorbate and aldarate metabolism 2
bna00520 Amino sugar and nucleotide sugar metabolism 2
bna01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00900 Terpenoid backbone biosynthesis 12
sot01200 Carbon metabolism 5
sot00280 Valine, leucine and isoleucine degradation 5
sot00650 Butanoate metabolism 5
sot00020 Citrate cycle (TCA cycle) 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 4
sot00260 Glycine, serine and threonine metabolism 2
sot00270 Cysteine and methionine metabolism 2
sot01230 Biosynthesis of amino acids 2
sot00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00900 Terpenoid backbone biosynthesis 3
cit01200 Carbon metabolism 2
cit03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01212 Fatty acid metabolism 6
bdi00620 Pyruvate metabolism 6
bdi01200 Carbon metabolism 6
bdi00061 Fatty acid biosynthesis 5
bdi00020 Citrate cycle (TCA cycle) 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00900 Terpenoid backbone biosynthesis 13
nta00020 Citrate cycle (TCA cycle) 6
nta04146 Peroxisome 4
nta00071 Fatty acid degradation 3
nta00280 Valine, leucine and isoleucine degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00900 Terpenoid backbone biosynthesis 7
nta00020 Citrate cycle (TCA cycle) 3
nta04146 Peroxisome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 824592 818452 100785593 100800990 101254587 100134900 4328034 103643980 100282878 103841340 103863245 100251686 7490899 7477172 25485588 123123228 123066929 123452736 123441095 107920209 107933302 106431384 106431385 8083094 102604354 102581346 102616609 100830501 107817230 107759723
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