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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   AS   argininosuccinate lyase 
 sly-r.6   AS   argininosuccinate lyase 
 ath-u.5   AT5G10920   L-Aspartase-like family protein 
 gma-u.5   100796544   argininosuccinate lyase, chloroplastic 
 gma-u.5   100780483   argininosuccinate lyase, chloroplastic 
 vvi-u.5   100262660   argininosuccinate lyase, chloroplastic 
 ppo-u.5   7467203   argininosuccinate lyase, chloroplastic 
 mtr-u.5   11423209   argininosuccinate lyase, chloroplastic 
 osa-u.5   4332596   argininosuccinate lyase, chloroplastic 
 zma-u.5   100191977   argininosuccinate lyase 

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Top 50 coexpressed genes to AS (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AS (sly-u.5 coexpression data)

CoexMap"101255089"


slyAS | Entrez gene ID : 101255089      
Species sly ath gma vvi ppo mtr osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 2 1 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly00220 [list] [network] Arginine biosynthesis (41 genes)
sly00250 [list] [network] Alanine, aspartate and glutamate metabolism (54 genes)
sly01230 [list] [network] Biosynthesis of amino acids (226 genes)
GO BP
GO:0042450 [list] [network] L-arginine biosynthetic process via ornithine  (3 genes)  IEA  
GO CC
GO:0005829 [list] [network] cytosol  (916 genes)  IEA  
GO MF
GO:0004056 [list] [network] argininosuccinate lyase activity  (1 genes)  IEA  
Protein NP_001316165.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  chlo_mito 5  (predict for NP_001316165.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_001316165.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
AS

.
sly-r.6
for
AS

.
ath-u.5
for
AT5G10920

.
gma-u.5
for
100796544

.
gma-u.5
for
100780483

.
vvi-u.5
for
100262660

.
ppo-u.5
for
7467203

.
mtr-u.5
for
11423209

.
osa-u.5
for
4332596

.
zma-u.5
for
100191977

.


Ortholog ID: 10290
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT5G10920 LOC100796544 LOC100780483 AS LOC4332596 LOC100191977 LOC103846769 LOC100262660 LOC7467203 LOC11423209 LOC123097688 LOC123085657 LOC123448832 LOC107917934 LOC107922428 LOC106415147 LOC106372444 CHLRE_01g021251v5 LOC8081084 LOC102578683 LOC102618891 LOC100828562 LOC107813406 LOC107783840
Function* L-Aspartase-like family protein argininosuccinate lyase, chloroplastic argininosuccinate lyase, chloroplastic argininosuccinate lyase argininosuccinate lyase, chloroplastic argininosuccinate lyase argininosuccinate lyase, chloroplastic argininosuccinate lyase, chloroplastic argininosuccinate lyase, chloroplastic argininosuccinate lyase, chloroplastic argininosuccinate lyase, chloroplastic argininosuccinate lyase, chloroplastic argininosuccinate lyase, chloroplastic argininosuccinate lyase, chloroplastic argininosuccinate lyase, chloroplastic argininosuccinate lyase, chloroplastic argininosuccinate lyase, chloroplastic-like uncharacterized protein argininosuccinate lyase, chloroplastic argininosuccinate lyase, chloroplastic argininosuccinate lyase, chloroplastic argininosuccinate lyase, chloroplastic argininosuccinate lyase, chloroplastic-like argininosuccinate lyase, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01230 Biosynthesis of amino acids 12
ath00230 Purine metabolism 5
ath00300 Lysine biosynthesis 5
ath00260 Glycine, serine and threonine metabolism 4
ath01210 2-Oxocarboxylic acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00710 Carbon fixation by Calvin cycle 8
gma01200 Carbon metabolism 8
gma01230 Biosynthesis of amino acids 6
gma00010 Glycolysis / Gluconeogenesis 5
gma00020 Citrate cycle (TCA cycle) 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01230 Biosynthesis of amino acids 5
gma00010 Glycolysis / Gluconeogenesis 5
gma01200 Carbon metabolism 5
gma00220 Arginine biosynthesis 4
gma00250 Alanine, aspartate and glutamate metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01230 Biosynthesis of amino acids 5
sly00220 Arginine biosynthesis 3
sly01240 Biosynthesis of cofactors 3
sly01210 2-Oxocarboxylic acid metabolism 2
sly00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01230 Biosynthesis of amino acids 11
osa00220 Arginine biosynthesis 4
osa00250 Alanine, aspartate and glutamate metabolism 4
osa00230 Purine metabolism 4
osa01210 2-Oxocarboxylic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01230 Biosynthesis of amino acids 4
zma03018 RNA degradation 3
zma03010 Ribosome 3
zma03015 mRNA surveillance pathway 2
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 9
bra01230 Biosynthesis of amino acids 4
bra00250 Alanine, aspartate and glutamate metabolism 3
bra00230 Purine metabolism 2
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 6
vvi03082 ATP-dependent chromatin remodeling 3
vvi00220 Arginine biosynthesis 2
vvi00250 Alanine, aspartate and glutamate metabolism 2
vvi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00230 Purine metabolism 3
ppo03008 Ribosome biogenesis in eukaryotes 2
ppo00220 Arginine biosynthesis 2
ppo00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00250 Alanine, aspartate and glutamate metabolism 3
mtr04075 Plant hormone signal transduction 2
mtr00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00220 Arginine biosynthesis 6
tae01230 Biosynthesis of amino acids 6
tae01210 2-Oxocarboxylic acid metabolism 3
tae00250 Alanine, aspartate and glutamate metabolism 3
tae03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00220 Arginine biosynthesis 5
tae01230 Biosynthesis of amino acids 5
tae00190 Oxidative phosphorylation 5
tae00250 Alanine, aspartate and glutamate metabolism 3
tae01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01230 Biosynthesis of amino acids 9
hvu00220 Arginine biosynthesis 4
hvu00400 Phenylalanine, tyrosine and tryptophan biosynthesis 4
hvu00250 Alanine, aspartate and glutamate metabolism 3
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 4
ghi04626 Plant-pathogen interaction 2
ghi03013 Nucleocytoplasmic transport 2
ghi03015 mRNA surveillance pathway 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 4
ghi04626 Plant-pathogen interaction 2
ghi03013 Nucleocytoplasmic transport 2
ghi03015 mRNA surveillance pathway 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00250 Alanine, aspartate and glutamate metabolism 7
bna00230 Purine metabolism 5
bna01232 Nucleotide metabolism 5
bna01240 Biosynthesis of cofactors 5
bna03015 mRNA surveillance pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00250 Alanine, aspartate and glutamate metabolism 8
bna00230 Purine metabolism 6
bna01232 Nucleotide metabolism 6
bna01240 Biosynthesis of cofactors 6
bna03015 mRNA surveillance pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00220 Arginine biosynthesis 10
cre01230 Biosynthesis of amino acids 8
cre00250 Alanine, aspartate and glutamate metabolism 6
cre01210 2-Oxocarboxylic acid metabolism 5
cre01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 3
sbi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 4
sot01230 Biosynthesis of amino acids 3
sot00220 Arginine biosynthesis 3
sot00250 Alanine, aspartate and glutamate metabolism 3
sot01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 4
cit03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01230 Biosynthesis of amino acids 8
bdi00300 Lysine biosynthesis 4
bdi03010 Ribosome 4
bdi00220 Arginine biosynthesis 2
bdi00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01230 Biosynthesis of amino acids 7
nta01210 2-Oxocarboxylic acid metabolism 4
nta00220 Arginine biosynthesis 3
nta00250 Alanine, aspartate and glutamate metabolism 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01230 Biosynthesis of amino acids 7
nta01210 2-Oxocarboxylic acid metabolism 4
nta00220 Arginine biosynthesis 3
nta00250 Alanine, aspartate and glutamate metabolism 2
nta03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 830959 100796544 100780483 101255089 4332596 100191977 103846769 100262660 7467203 11423209 123097688 123085657 123448832 107917934 107922428 106415147 106372444 5715208 8081084 102578683 102618891 100828562 107813406 107783840
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