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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101255129   E3 ubiquitin-protein ligase PRT6 
 sly-r.6   101255129   E3 ubiquitin-protein ligase PRT6 
 sly-m.5   101255129   E3 ubiquitin-protein ligase PRT6 
 sly-u.5   101261865   E3 ubiquitin-protein ligase PRT6 
 ath-u.5   PRT6   proteolysis 6 
 gma-u.5   100818009   E3 ubiquitin-protein ligase PRT6 
 gma-u.5   100805660   E3 ubiquitin-protein ligase PRT6 
 vvi-u.5   100245881   E3 ubiquitin-protein ligase PRT6 
 ppo-u.5   7454927   E3 ubiquitin-protein ligase PRT6 
 mtr-u.5   11409414   E3 ubiquitin-protein ligase PRT6 
 osa-u.5   4325212   E3 ubiquitin-protein ligase PRT6 
 zma-u.5   100192707   uncharacterized LOC100192707 

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Top 50 coexpressed genes to 101255129 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101255129 (sly-u.5 coexpression data)

CoexMap"101255129"


slyLOC101255129 | Entrez gene ID : 101255129    
Species sly ath gma vvi ppo mtr osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 1 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0071596 [list] [network] ubiquitin-dependent protein catabolic process via the N-end rule pathway  (2 genes)  IEA  
GO:0016567 [list] [network] protein ubiquitination  (334 genes)  IEA  
GO CC
GO:0000151 [list] [network] ubiquitin ligase complex  (148 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (5127 genes)  IEA  
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (194 genes)  IEA  
GO:0008270 [list] [network] zinc ion binding  (1242 genes)  IEA  
Protein XP_004246872.2 [sequence] [blastp]
XP_010325853.1 [sequence] [blastp]
XP_010325854.1 [sequence] [blastp]
XP_010325855.1 [sequence] [blastp]
XP_010325856.1 [sequence] [blastp]
XP_010325857.1 [sequence] [blastp]
XP_025888539.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  golg 2,  cysk_nucl 2,  cyto 1,  golg_plas 1  (predict for XP_004246872.2)
nucl 4,  golg 2,  cysk_nucl 2,  cyto 1,  golg_plas 1  (predict for XP_010325853.1)
nucl 4,  golg 2,  cysk_nucl 2,  cyto 1,  golg_plas 1  (predict for XP_010325854.1)
nucl 4,  golg 2,  cysk_nucl 2,  cyto 1,  golg_plas 1  (predict for XP_010325855.1)
nucl 4,  golg 2,  cysk_nucl 2,  cyto 1,  golg_plas 1  (predict for XP_010325856.1)
nucl 4,  golg 2,  cysk_nucl 2,  cyto 1,  golg_plas 1  (predict for XP_010325857.1)
nucl 4,  cyto 2,  golg 2,  nucl_plas 2  (predict for XP_025888539.1)
Subcellular
localization
TargetP
other 7,  chlo 3  (predict for XP_004246872.2)
other 7,  chlo 3  (predict for XP_010325853.1)
other 7,  chlo 3  (predict for XP_010325854.1)
other 7,  chlo 3  (predict for XP_010325855.1)
other 7,  chlo 3  (predict for XP_010325856.1)
other 7,  chlo 3  (predict for XP_010325857.1)
other 7,  chlo 3  (predict for XP_025888539.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101255129

.
sly-r.6
for
101255129

.
sly-m.5
for
101255129

.
sly-u.5
for
101261865

.
ath-u.5
for
PRT6

.
gma-u.5
for
100818009

.
gma-u.5
for
100805660

.
vvi-u.5
for
100245881

.
ppo-u.5
for
7454927

.
mtr-u.5
for
11409414

.
osa-u.5
for
4325212

.
zma-u.5
for
100192707

.


Ortholog ID: 4437
Species ath gma gma sly sly osa zma bra bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot sot cit bdi nta nta
Symbol PRT6 LOC100805660 LOC100818009 LOC101261865 LOC101255129 LOC4325212 LOC100192707 LOC103847459 LOC103855459 LOC100245881 LOC7454927 LOC11409414 LOC123077134 LOC123077144 LOC123442688 LOC107889688 LOC107939925 LOC106448753 LOC106429041 CHLRE_02g089237v5 LOC8073304 LOC102594606 LOC102603446 LOC102617693 LOC100845375 LOC107820058 LOC107797361
Function* proteolysis 6 E3 ubiquitin-protein ligase PRT6 E3 ubiquitin-protein ligase PRT6 E3 ubiquitin-protein ligase PRT6 E3 ubiquitin-protein ligase PRT6 E3 ubiquitin-protein ligase PRT6 uncharacterized LOC100192707 E3 ubiquitin-protein ligase PRT6 E3 ubiquitin-protein ligase PRT6 E3 ubiquitin-protein ligase PRT6 E3 ubiquitin-protein ligase PRT6 E3 ubiquitin-protein ligase PRT6 E3 ubiquitin-protein ligase PRT6 E3 ubiquitin-protein ligase PRT6 E3 ubiquitin-protein ligase PRT6-like E3 ubiquitin-protein ligase PRT6 E3 ubiquitin-protein ligase PRT6 E3 ubiquitin-protein ligase PRT6 E3 ubiquitin-protein ligase PRT6 uncharacterized protein E3 ubiquitin-protein ligase PRT6 E3 ubiquitin-protein ligase PRT6-like E3 ubiquitin-protein ligase PRT6 E3 ubiquitin-protein ligase PRT6 E3 ubiquitin-protein ligase PRT6 E3 ubiquitin-protein ligase PRT6 E3 ubiquitin-protein ligase PRT6
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 5
ath03082 ATP-dependent chromatin remodeling 2
ath04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 6
gma00630 Glyoxylate and dicarboxylate metabolism 2
gma00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 4
gma00220 Arginine biosynthesis 2
gma00250 Alanine, aspartate and glutamate metabolism 2
gma00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 5
zma04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 4
bra03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 3
bra03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03082 ATP-dependent chromatin remodeling 2
vvi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 4
ppo03013 Nucleocytoplasmic transport 3
ppo04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 2
mtr04120 Ubiquitin mediated proteolysis 2
mtr00562 Inositol phosphate metabolism 2
mtr04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 4
tae04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 2
bna04712 Circadian rhythm - plant 2
bna04148 Efferocytosis 2
bna04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04712 Circadian rhythm - plant 2
bna04148 Efferocytosis 2
bna04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04136 Autophagy - other 3
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 4
sot04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 3
sot03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 3
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 2
bdi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
nta04136 Autophagy - other 2
nta04518 Integrin signaling 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 830916 100805660 100818009 101261865 101255129 4325212 100192707 103847459 103855459 100245881 7454927 11409414 123077134 123077144 123442688 107889688 107939925 106448753 106429041 66052302 8073304 102594606 102603446 102617693 100845375 107820058 107797361
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