ATTED-II : GeneCoexpression result

Species	Gene	Description
sly-u.5	101255199	probable RNA methyltransferase At5g51130
sly-r.6	101255199	probable RNA methyltransferase At5g51130
ath-u.5	AT5G51130	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
gma-u.5	100500304	S-adenosylmethionine-dependent methyltransferases superfamily protein
vvi-u.5	100261137	probable RNA methyltransferase At5g51130
ppo-u.5	7488930	probable RNA methyltransferase At5g51130
mtr-u.5	11412377	probable RNA methyltransferase At5g51130
osa-u.5	4346188	probable RNA methyltransferase At5g51130
zma-u.5	103654422	probable RNA methyltransferase At5g51130
zma-u.5	103652738	probable RNA methyltransferase At5g51130

functional annotation

KEGG

GO BP

GO:0040031 [list] [network] snRNA modification

(4 genes)

IEA

GO CC

GO MF

GO:0017069 [list] [network] snRNA binding	(17 genes)	IEA
GO:0008171 [list] [network] O-methyltransferase activity	(41 genes)	IEA
GO:0008173 [list] [network] RNA methyltransferase activity	(54 genes)	IEA

Protein

XP_004240095.2 [sequence] [blastp]

Subcellular
localization
wolf

cyto 6, nucl 4

(predict for XP_004240095.2)

Subcellular
localization
TargetP

other 8, mito 3

(predict for XP_004240095.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sly-u.5 for 101255199 .	sly-r.6 for 101255199 .	ath-u.5 for AT5G51130 .	gma-u.5 for 100500304 .	vvi-u.5 for 100261137 .	ppo-u.5 for 7488930 .	mtr-u.5 for 11412377 .	osa-u.5 for 4346188 .	zma-u.5 for 103654422 .	zma-u.5 for 103652738 .

Ortholog ID: 6372

Species

ath

gma

sly

osa

zma

bra

vvi

ppo

mtr

tae

hvu

ghi

bna

cre

sbi

sot

cit

bdi

nta

Symbol

Function^*

S-adenosyl-L-methionine-dependent methyltransferases superfamily protein

S-adenosylmethionine-dependent methyltransferases superfamily protein

probable RNA methyltransferase At5g51130

uncharacterized protein

probable RNA methyltransferase At5g51130

putative RNA methyltransferase At5g51130

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03020	RNA polymerase	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00330	Arginine and proline metabolism	2
zma00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03008	Ribosome biogenesis in eukaryotes	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	2
vvi03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03020	RNA polymerase	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03040	Spliceosome	3
hvu03420	Nucleotide excision repair	2
hvu04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	4
hvu03008	Ribosome biogenesis in eukaryotes	3
hvu03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03020	RNA polymerase	2
ghi03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03008	Ribosome biogenesis in eukaryotes	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03008	Ribosome biogenesis in eukaryotes	3
sbi03440	Homologous recombination	2
sbi00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03008	Ribosome biogenesis in eukaryotes	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00230	Purine metabolism	2
bdi01232	Nucleotide metabolism	2
bdi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00220	Arginine biosynthesis	2
nta01210	2-Oxocarboxylic acid metabolism	2
nta01230	Biosynthesis of amino acids	2

Expression

Expression pattern

Entrez Gene ID^*

835187

100500304

101255199

4346188

103654422

103652738

103857196

100261137

7488930

11412377

123152188

123157062

123408741

123408742

107933007

107930782

125585438

5726183

8060569

8055278

102582951

102607054

100828615

107797299

107809636

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 101255199 (sly-u.5 coexpression data)

Top 50 enrichment test to 101255199 (sly-u.5 coexpression data)


Species	sly	ath	gma	vvi	ppo	mtr	osa	zma	hvu	sot	tae	nta	bra	cit	ghi	bna	bdi	sbi	cre
Paralog	2	1	1	1	1	1	1	2	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 101255199 (sly-u.5 coexpression data)

Top 50 enrichment test to 101255199 (sly-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**