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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101255233   uncharacterized LOC101255233 
 sly-r.6   101255233   uncharacterized LOC101255233 
 sly-m.5   101255233   uncharacterized LOC101255233 
 ath-u.5   AT5G03880   Thioredoxin family protein 
 gma-u.5   100792004   uncharacterized LOC100792004 
 gma-u.5   100789895   uncharacterized LOC100789895 
 vvi-u.5   100261348   uncharacterized LOC100261348 
 ppo-u.5   7492255   uncharacterized LOC7492255 
 mtr-u.5   25483820   uncharacterized LOC25483820 
 osa-u.5   4346305   uncharacterized LOC4346305 
 zma-u.5   103643193   uncharacterized LOC103643193 
 zma-u.5   103643192   Thioredoxin family protein 
 zma-u.5   100384430   Thioredoxin family protein 

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Top 50 coexpressed genes to 101255233 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101255233 (sly-u.5 coexpression data)

CoexMap"101255233"


slyLOC101255233 | Entrez gene ID : 101255233    
Species sly ath gma vvi ppo mtr osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 3 1 2 1 1 1 1 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0009507 [list] [network] chloroplast  (632 genes)  IEA  
GO MF
Protein XP_004246517.1 [sequence] [blastp]
XP_010325904.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  chlo_mito 5  (predict for XP_004246517.1)
chlo 9,  chlo_mito 5  (predict for XP_010325904.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_004246517.1)
chlo 9  (predict for XP_010325904.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101255233

.
sly-r.6
for
101255233

.
sly-m.5
for
101255233

.
ath-u.5
for
AT5G03880

.
gma-u.5
for
100792004

.
gma-u.5
for
100789895

.
vvi-u.5
for
100261348

.
ppo-u.5
for
7492255

.
mtr-u.5
for
25483820

.
osa-u.5
for
4346305

.
zma-u.5
for
103643193

.
zma-u.5
for
103643192

.
zma-u.5
for
100384430

.


Ortholog ID: 5577
Species ath gma gma sly osa zma zma bra bra vvi ppo mtr tae tae hvu hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT5G03880 LOC100789895 LOC100792004 LOC101255233 LOC4346305 LOC103643192 LOC103643193 LOC103847353 LOC103855546 LOC100261348 LOC7492255 LOC25483820 LOC123168769 LOC123163668 LOC123410951 LOC123407844 LOC107925506 LOC107928127 BNAA10G26270D BNACNNG10640D CHLRE_06g261500v5 LOC8057981 LOC102603338 LOC102621296 LOC100825225 LOC142164574 LOC142164576
Function* Thioredoxin family protein uncharacterized LOC100789895 uncharacterized LOC100792004 uncharacterized LOC101255233 uncharacterized LOC4346305 Thioredoxin family protein uncharacterized LOC103643193 uncharacterized LOC103847353 uncharacterized LOC103855546 uncharacterized LOC100261348 uncharacterized LOC7492255 uncharacterized LOC25483820 uncharacterized LOC123168769 uncharacterized LOC123163668 uncharacterized LOC123410951 uncharacterized LOC123407844 uncharacterized LOC107925506 uncharacterized LOC107928127 uncharacterized BNAA10G26270D uncharacterized BNACNNG10640D uncharacterized protein uncharacterized LOC8057981 uncharacterized LOC102603338 uncharacterized LOC102621296 uncharacterized LOC100825225 uncharacterized LOC142164574 uncharacterized LOC142164576
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00230 Purine metabolism 2
ath00730 Thiamine metabolism 2
ath01232 Nucleotide metabolism 2
ath01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 5
gma00270 Cysteine and methionine metabolism 2
gma00920 Sulfur metabolism 2
gma01200 Carbon metabolism 2
gma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 7
bra00010 Glycolysis / Gluconeogenesis 6
bra00710 Carbon fixation by Calvin cycle 6
bra01230 Biosynthesis of amino acids 6
bra00030 Pentose phosphate pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 2
vvi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 8
ppo00710 Carbon fixation by Calvin cycle 6
ppo01230 Biosynthesis of amino acids 5
ppo00195 Photosynthesis 4
ppo00030 Pentose phosphate pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03060 Protein export 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04146 Peroxisome 2
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03060 Protein export 2
cit00906 Carotenoid biosynthesis 2
cit00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00908 Zeatin biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 3
nta00260 Glycine, serine and threonine metabolism 2
nta00460 Cyanoamino acid metabolism 2
nta00630 Glyoxylate and dicarboxylate metabolism 2
nta00670 One carbon pool by folate 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 831679 100789895 100792004 101255233 4346305 103643192 103643193 103847353 103855546 100261348 7492255 25483820 123168769 123163668 123410951 123407844 107925506 107928127 106372656 106433859 5722028 8057981 102603338 102621296 100825225 142164574 142164576
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