Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101255938   protein LOW PHOTOSYNTHETIC EFFICIENCY 1, chloroplastic 
 sly-r.6   101255938   protein LOW PHOTOSYNTHETIC EFFICIENCY 1, chloroplastic 
 ath-u.5   AT3G46610   Pentatricopeptide repeat (PPR-like) superfamily protein 
 ath-u.5   AT5G14350   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   100805229   protein LOW PHOTOSYNTHETIC EFFICIENCY 1, chloroplastic 
 gma-u.5   100788016   protein LOW PHOTOSYNTHETIC EFFICIENCY 1, chloroplastic 
 vvi-u.5   100242401   protein LOW PHOTOSYNTHETIC EFFICIENCY 1, chloroplastic 
 ppo-u.5   7461314   protein LOW PHOTOSYNTHETIC EFFICIENCY 1, chloroplastic 
 mtr-u.5   120576927   protein LOW PHOTOSYNTHETIC EFFICIENCY 1, chloroplastic 
 osa-u.5   4351990   protein LOW PHOTOSYNTHETIC EFFICIENCY 1, chloroplastic 
 zma-u.5   100275894   uncharacterized LOC100275894 

close


Top 50 coexpressed genes to 101255938 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 101255938 (sly-u.5 coexpression data)

CoexMap"101255938"


slyLOC101255938 | Entrez gene ID : 101255938      
Species sly ath gma vvi ppo mtr osa zma hvu bna cit bra ghi sbi bdi nta tae cre sot
Paralog 2 2 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (3982 genes)  IEA  
Protein XP_004231824.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  cyto 3,  nucl 1,  cyto_pero 1,  cyto_E.R. 1  (predict for XP_004231824.1)
Subcellular
localization
TargetP
chlo 4  (predict for XP_004231824.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101255938
sly-r.6
for
101255938
ath-u.5
for
AT3G46610
ath-u.5
for
AT5G14350
gma-u.5
for
100805229
gma-u.5
for
100788016
vvi-u.5
for
100242401
ppo-u.5
for
7461314
mtr-u.5
for
120576927
osa-u.5
for
4351990
zma-u.5
for
100275894


Ortholog ID: 10130
Species sly sot nta nta ath ath gma gma bra vvi ppo mtr ghi ghi bna bna cit osa zma tae tae hvu sbi bdi
Symbol LOC101255938 LOC102587961 LOC107802646 LOC107774773 AT3G46610 AT5G14350 LOC100788016 LOC100805229 LOC103856073 LOC100242401 LOC7461314 LOC120576927 LOC107957096 LOC107898489 LOC106381316 LOC106418350 LOC102623218 LOC4351990 LOC100275894 LOC123062802 LOC123079978 LOC123440589 LOC8065559 LOC100833309
Function* protein LOW PHOTOSYNTHETIC EFFICIENCY 1, chloroplastic pentatricopeptide repeat-containing protein At3g46610-like uncharacterized LOC107802646 uncharacterized LOC107774773 Pentatricopeptide repeat (PPR-like) superfamily protein Pentatricopeptide repeat (PPR) superfamily protein protein LOW PHOTOSYNTHETIC EFFICIENCY 1, chloroplastic protein LOW PHOTOSYNTHETIC EFFICIENCY 1, chloroplastic protein LOW PHOTOSYNTHETIC EFFICIENCY 1, chloroplastic protein LOW PHOTOSYNTHETIC EFFICIENCY 1, chloroplastic protein LOW PHOTOSYNTHETIC EFFICIENCY 1, chloroplastic protein LOW PHOTOSYNTHETIC EFFICIENCY 1, chloroplastic protein LOW PHOTOSYNTHETIC EFFICIENCY 1, chloroplastic protein LOW PHOTOSYNTHETIC EFFICIENCY 1, chloroplastic protein LOW PHOTOSYNTHETIC EFFICIENCY 1, chloroplastic protein LOW PHOTOSYNTHETIC EFFICIENCY 1, chloroplastic-like protein LOW PHOTOSYNTHETIC EFFICIENCY 1, chloroplastic protein LOW PHOTOSYNTHETIC EFFICIENCY 1, chloroplastic uncharacterized LOC100275894 protein LOW PHOTOSYNTHETIC EFFICIENCY 1, chloroplastic protein LOW PHOTOSYNTHETIC EFFICIENCY 1, chloroplastic protein LOW PHOTOSYNTHETIC EFFICIENCY 1, chloroplastic-like pentatricopeptide repeat-containing protein At3g46610 pentatricopeptide repeat-containing protein At3g46610
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00960 Tropane, piperidine and pyridine alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04712 Circadian rhythm - plant 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04712 Circadian rhythm - plant 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00710 Carbon fixation by Calvin cycle 5
tae01200 Carbon metabolism 5
tae00860 Porphyrin metabolism 3
tae00900 Terpenoid backbone biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00860 Porphyrin metabolism 7
tae00900 Terpenoid backbone biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00561 Glycerolipid metabolism 2
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04712 Circadian rhythm - plant 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101255938 102587961 107802646 107774773 823814 831286 100788016 100805229 103856073 100242401 7461314 120576927 107957096 107898489 106381316 106418350 102623218 4351990 100275894 123062802 123079978 123440589 8065559 100833309
The preparation time of this page was 0.1 [sec].