ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sly-u.5	101255970	co-chaperone protein p23-1
sly-r.6	101255970	co-chaperone protein p23-1
sly-u.5	101260189	co-chaperone protein p23-2
sly-u.5	101249490	uncharacterized protein OsI_027940
sly-u.5	DDTFR8	ripening regulated protein DDTFR8
sot-r.1	102600626	uncharacterized protein At3g03773
sot-r.1	102595594	uncharacterized protein OsI_027940
sot-r.1	102603559	uncharacterized protein OsI_027940-like
nta-r.1	107815574	co-chaperone protein p23-2-like
nta-r.1	107767457	co-chaperone protein p23-1
nta-r.1	107785174	uncharacterized protein OsI_027940
ath-u.5	AT3G03773	HSP20-like chaperones superfamily protein
ath-u.5	AT4G02450	HSP20-like chaperones superfamily protein
gma-u.5	100819939	co-chaperone protein p23-2
gma-u.5	100798465	co-chaperone protein p23-1
gma-u.5	100796372	uncharacterized LOC100796372
bra-r.6	103828218	co-chaperone protein p23-2
bra-r.6	103840830	co-chaperone protein p23-1
bra-r.6	103844554	co-chaperone protein p23-1
vvi-u.5	100264829	co-chaperone protein p23-1
vvi-u.5	100258848	uncharacterized protein OsI_027940
vvi-u.5	100257397	co-chaperone protein p23-1
ppo-u.5	7468746	co-chaperone protein p23-1
ppo-u.5	7491059	co-chaperone protein p23-2
ppo-u.5	7482372	co-chaperone protein p23-2
mtr-u.5	11408847	co-chaperone protein p23-1
mtr-u.5	11420022	uncharacterized protein OsI_027940
mtr-u.5	11432522	uncharacterized protein Os08g0359500
ghi-r.1	107918285	co-chaperone protein p23-2
ghi-r.1	107946083	uncharacterized protein OsI_027940
ghi-r.1	107931244	uncharacterized protein OsI_027940
bna-r.1	111200817	co-chaperone protein p23-1-like
bna-r.1	125586419	co-chaperone protein p23-1-like
bna-r.1	106445320	co-chaperone protein p23-2
cit-r.1	102622672	hypothetical protein
cit-r.1	102614619	co-chaperone protein p23-1-like
cit-r.1	102608624	co-chaperone protein p23-2
osa-u.5	4345369	Uncharacterized protein Os08g0359500
osa-u.5	4333609	co-chaperone protein p23-2
osa-u.5	4332979	co-chaperone protein p23-1
zma-u.5	100282216	prostaglandin E synthase 3
zma-u.5	100856929	co-chaperone protein SBA1
zma-u.5	100282592	uncharacterized LOC100282592
tae-r.2	123094826	co-chaperone protein p23-1
tae-r.2	123090563	co-chaperone protein p23-2
tae-r.2	123087367	co-chaperone protein p23-2
hvu-r.1	123446914	co-chaperone protein p23-2
hvu-r.1	123407183	uncharacterized protein Os08g0359500
sbi-r.1	8057217	uncharacterized protein At3g03773
sbi-r.1	8080752	uncharacterized protein OsI_027940
sbi-r.1	8071019	uncharacterized protein OsI_027940
bdi-r.1	100833967	uncharacterized protein At3g03773
bdi-r.1	100829416	uncharacterized protein Os08g0359500
bdi-r.1	100831372	uncharacterized protein OsI_027940
cre-r.1	CHLRE_07g341550v5	uncharacterized protein

Top 50 coexpressed genes to 101255970 (sly-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 101255970 (sly-u.5 coexpression data)

CoexMap"101255970"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0051131 [list] [network] chaperone-mediated protein complex assembly	(6 genes)	IEA
GO:0006457 [list] [network] protein folding	(160 genes)	IEA

GO CC

GO:0005829 [list] [network] cytosol	(916 genes)	IEA
GO:0005634 [list] [network] nucleus	(2947 genes)	IEA

GO MF

GO:0051879 [list] [network] Hsp90 protein binding	(9 genes)	IEA
GO:0051087 [list] [network] protein-folding chaperone binding	(57 genes)	IEA

Protein

XP_004252558.2 [sequence] [blastp]
XP_010314468.2 [sequence] [blastp]

Subcellular
localization
wolf

cyto 4, cyto_nucl 4, chlo 2, nucl 1, chlo_mito 1	(predict for XP_004252558.2)
cyto 6, cyto_nucl 4, chlo 2, mito 1	(predict for XP_010314468.2)

Subcellular
localization
TargetP

other 7, mito 3	(predict for XP_004252558.2)
other 7, mito 3	(predict for XP_010314468.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sly-u.5 for 101255970	sly-r.6 for 101255970	sly-u.5 for 101260189	sly-u.5 for 101249490	sly-u.5 for DDTFR8	sot-r.1 for 102600626	sot-r.1 for 102595594	sot-r.1 for 102603559	nta-r.1 for 107815574	nta-r.1 for 107767457	nta-r.1 for 107785174	ath-u.5 for AT3G03773	ath-u.5 for AT4G02450	gma-u.5 for 100819939	gma-u.5 for 100798465	gma-u.5 for 100796372	bra-r.6 for 103828218	bra-r.6 for 103840830	bra-r.6 for 103844554	vvi-u.5 for 100264829	vvi-u.5 for 100258848	vvi-u.5 for 100257397	ppo-u.5 for 7468746	ppo-u.5 for 7491059	ppo-u.5 for 7482372	mtr-u.5 for 11408847	mtr-u.5 for 11420022	mtr-u.5 for 11432522	ghi-r.1 for 107918285	ghi-r.1 for 107946083	ghi-r.1 for 107931244	bna-r.1 for 111200817	bna-r.1 for 125586419	bna-r.1 for 106445320	cit-r.1 for 102622672	cit-r.1 for 102614619	cit-r.1 for 102608624	osa-u.5 for 4345369	osa-u.5 for 4333609	osa-u.5 for 4332979	zma-u.5 for 100282216	zma-u.5 for 100856929	zma-u.5 for 100282592	tae-r.2 for 123094826	tae-r.2 for 123090563	tae-r.2 for 123087367	hvu-r.1 for 123446914	hvu-r.1 for 123407183	sbi-r.1 for 8057217	sbi-r.1 for 8080752	sbi-r.1 for 8071019	bdi-r.1 for 100833967	bdi-r.1 for 100829416	bdi-r.1 for 100831372	cre-r.1 for CHLRE_07g341550v5

Ortholog

Ortholog ID: 1107

Species

sly

sot

nta

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

co-chaperone protein p23-1

co-chaperone protein p23-2

uncharacterized protein OsI_027940

uncharacterized protein OsI_027940-like

uncharacterized protein Os08g0359500-like

uncharacterized protein OsI_027940

uncharacterized protein OsI_027940-like

HSP20-like chaperones superfamily protein

co-chaperone protein p23-1

uncharacterized LOC100527476

alpha-crystallin-Hsps_p23-like domain-containing protein

co-chaperone protein p23-1

uncharacterized protein OsI_027940

co-chaperone protein p23-1

co-chaperone protein p23-2

co-chaperone protein p23-1

uncharacterized protein OsI_027940

uncharacterized protein Os08g0359500

co-chaperone protein p23-2

uncharacterized protein OsI_027940

co-chaperone protein p23-2

co-chaperone protein p23-1-like

hypothetical protein

co-chaperone protein p23-1-like

co-chaperone protein p23-2

Uncharacterized protein Os08g0359500

co-chaperone protein p23-2

co-chaperone protein p23-1

prostaglandin E synthase 3

co-chaperone protein SBA1

uncharacterized LOC100282649

co-chaperone protein p23-2

co-chaperone protein p23-1

co-chaperone protein p23-2

uncharacterized protein Os08g0359500

uncharacterized protein At3g03773

uncharacterized protein OsI_027940

uncharacterized protein At3g03773

uncharacterized protein Os08g0359500

uncharacterized protein OsI_027940

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00190	Oxidative phosphorylation	3
sly03010	Ribosome	3
sly03018	RNA degradation	2
sly03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	3
sly03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	7
sot03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04141	Protein processing in endoplasmic reticulum	13
sot03040	Spliceosome	2
sot04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	11
nta00030	Pentose phosphate pathway	2
nta00480	Glutathione metabolism	2
nta01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03018	RNA degradation	4
nta00270	Cysteine and methionine metabolism	2
nta00010	Glycolysis / Gluconeogenesis	2
nta00051	Fructose and mannose metabolism	2
nta00562	Inositol phosphate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03018	RNA degradation	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	3
ath03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	4
ath03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	5
gma03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00564	Glycerophospholipid metabolism	2
gma00630	Glyoxylate and dicarboxylate metabolism	2
gma00650	Butanoate metabolism	2
gma01200	Carbon metabolism	2
gma00230	Purine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04141	Protein processing in endoplasmic reticulum	10
bra04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03018	RNA degradation	5
vvi03008	Ribosome biogenesis in eukaryotes	3
vvi03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03050	Proteasome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04141	Protein processing in endoplasmic reticulum	10
vvi03040	Spliceosome	3
vvi04144	Endocytosis	3
vvi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	3
ppo03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03018	RNA degradation	3
ppo04626	Plant-pathogen interaction	3
ppo04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04141	Protein processing in endoplasmic reticulum	5
mtr03040	Spliceosome	3
mtr04144	Endocytosis	3
mtr04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	15

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	9
mtr03020	RNA polymerase	3
mtr03040	Spliceosome	2
mtr03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00350	Tyrosine metabolism	2
ghi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03018	RNA degradation	4
ghi04141	Protein processing in endoplasmic reticulum	2
ghi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03018	RNA degradation	4
ghi04141	Protein processing in endoplasmic reticulum	2
ghi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03022	Basal transcription factors	2
bna03420	Nucleotide excision repair	2
bna00760	Nicotinate and nicotinamide metabolism	2
bna01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04141	Protein processing in endoplasmic reticulum	4
cit03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03050	Proteasome	2
cit03040	Spliceosome	2
cit04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03022	Basal transcription factors	3
osa03018	RNA degradation	3
osa03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04141	Protein processing in endoplasmic reticulum	4
osa04626	Plant-pathogen interaction	2
osa03040	Spliceosome	2
osa04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04141	Protein processing in endoplasmic reticulum	6
zma03040	Spliceosome	2
zma04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03040	Spliceosome	3
zma03018	RNA degradation	2
zma03010	Ribosome	2
zma03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03040	Spliceosome	4
zma03082	ATP-dependent chromatin remodeling	3
zma03083	Polycomb repressive complex	2
zma03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03050	Proteasome	3
tae03008	Ribosome biogenesis in eukaryotes	3
tae03013	Nucleocytoplasmic transport	3
tae03250	Viral life cycle - HIV-1	3
tae00760	Nicotinate and nicotinamide metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04141	Protein processing in endoplasmic reticulum	4
tae03040	Spliceosome	3
tae04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03020	RNA polymerase	2
hvu03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	7
hvu03018	RNA degradation	2
hvu03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	2
sbi03250	Viral life cycle - HIV-1	2
sbi03272	Virion - Hepatitis viruses	2
sbi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04141	Protein processing in endoplasmic reticulum	3
sbi04626	Plant-pathogen interaction	3
sbi00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03008	Ribosome biogenesis in eukaryotes	2
bdi03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre04141	Protein processing in endoplasmic reticulum	5
cre03018	RNA degradation	2

Expression

Expression pattern

Entrez Gene ID^*

101255970

101260189

101249490

102595594

102603559

102592515

107787640

107794812

142179344

821159

828006

100798465

100527476

100499842

103840830

103858762

103868209

100264829

100258848

100257397

7468746

7482372

7464788

11420022

11432522

25495838

107893773

107949661

107917325

106445320

106433057

106438678

102622672

102614619

102608624

4345369

4333609

4332979

100282216

100856929

100282649

123087367

123106576

123188261

123446914

123407183

8057217

8080752

8071019

100833967

100829416

100831372

5717998

The preparation time of this page was 0.2 [sec].


Species	sly	sot	nta	ath	gma	bra	vvi	ppo	mtr	ghi	bna	cit	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	5	3	3	2	3	3	3	3	3	3	3	3	3	3	3	2	3	3	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 101255970 (sly-u.5 coexpression data)

Top 50 enrichment test to 101255970 (sly-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**