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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101256354   pentatricopeptide repeat-containing protein At5g40400 
 sly-r.6   101256354   pentatricopeptide repeat-containing protein At5g40400 
 ath-u.5   AT5G40400   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   100776934   pentatricopeptide repeat-containing protein At5g40400 
 vvi-u.5   100852903   pentatricopeptide repeat-containing protein At5g40400 
 ppo-u.5   7461319   pentatricopeptide repeat-containing protein At5g40400 
 mtr-u.5   11430173   pentatricopeptide repeat-containing protein At5g40400 

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Top 50 coexpressed genes to 101256354 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101256354 (sly-u.5 coexpression data)

CoexMap"101256354"


slyLOC101256354 | Entrez gene ID : 101256354    
Species sly ath gma vvi ppo mtr bdi hvu bra cit bna sbi ghi osa sot nta cre tae zma
Paralog 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (3982 genes)  IEA  
Protein XP_019068316.1 [sequence] [blastp]
XP_019068322.1 [sequence] [blastp]
XP_019068324.1 [sequence] [blastp]
XP_025886151.1 [sequence] [blastp]
XP_025886156.1 [sequence] [blastp]
XP_025886159.1 [sequence] [blastp]
XP_069152239.1 [sequence] [blastp]
XP_069152240.1 [sequence] [blastp]
XP_069152241.1 [sequence] [blastp]
XP_069152243.1 [sequence] [blastp]
XP_069152244.1 [sequence] [blastp]
XP_069152245.1 [sequence] [blastp]
XP_069152246.1 [sequence] [blastp]
XP_069152247.1 [sequence] [blastp]
XP_069152248.1 [sequence] [blastp]
XP_069152249.1 [sequence] [blastp]
XP_069152250.1 [sequence] [blastp]
XP_069152251.1 [sequence] [blastp]
XP_069152252.1 [sequence] [blastp]
XP_069152253.1 [sequence] [blastp]
XP_069152254.1 [sequence] [blastp]
XP_069152255.1 [sequence] [blastp]
XP_069152256.1 [sequence] [blastp]
XP_069152257.1 [sequence] [blastp]
XP_069152258.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  mito 1,  cyto_mito 1  (predict for XP_019068316.1)
chlo 9,  mito 1,  cyto_mito 1  (predict for XP_019068322.1)
chlo 9,  mito 1,  cyto_mito 1  (predict for XP_019068324.1)
chlo 9,  mito 1,  cyto_mito 1  (predict for XP_025886151.1)
chlo 9,  mito 1,  cyto_mito 1  (predict for XP_025886156.1)
chlo 9,  mito 1,  cyto_mito 1  (predict for XP_025886159.1)
chlo 9,  mito 1,  cyto_mito 1  (predict for XP_069152239.1)
chlo 9,  mito 1,  cyto_mito 1  (predict for XP_069152240.1)
chlo 9,  mito 1,  cyto_mito 1  (predict for XP_069152241.1)
chlo 9,  mito 1,  cyto_mito 1  (predict for XP_069152243.1)
chlo 9,  mito 1,  cyto_mito 1  (predict for XP_069152244.1)
chlo 9,  mito 1,  cyto_mito 1  (predict for XP_069152245.1)
chlo 9,  mito 1,  cyto_mito 1  (predict for XP_069152246.1)
chlo 9,  mito 1,  cyto_mito 1  (predict for XP_069152247.1)
chlo 9,  mito 1,  cyto_mito 1  (predict for XP_069152248.1)
chlo 9,  mito 1,  cyto_mito 1  (predict for XP_069152249.1)
chlo 9,  mito 1,  cyto_mito 1  (predict for XP_069152250.1)
chlo 9,  mito 1,  cyto_mito 1  (predict for XP_069152251.1)
chlo 9,  mito 1,  cyto_mito 1  (predict for XP_069152252.1)
chlo 9,  mito 1,  cyto_mito 1  (predict for XP_069152253.1)
chlo 9,  mito 1,  cyto_mito 1  (predict for XP_069152254.1)
chlo 9,  mito 1,  cyto_mito 1  (predict for XP_069152255.1)
chlo 9,  mito 1,  cyto_mito 1  (predict for XP_069152256.1)
chlo 9,  mito 1,  cyto_mito 1  (predict for XP_069152257.1)
chlo 9,  mito 1,  cyto_mito 1  (predict for XP_069152258.1)
Subcellular
localization
TargetP
chlo 5  (predict for XP_019068316.1)
chlo 5  (predict for XP_019068322.1)
chlo 5  (predict for XP_019068324.1)
chlo 5  (predict for XP_025886151.1)
chlo 5  (predict for XP_025886156.1)
chlo 5  (predict for XP_025886159.1)
chlo 5  (predict for XP_069152239.1)
chlo 5  (predict for XP_069152240.1)
chlo 5  (predict for XP_069152241.1)
chlo 5  (predict for XP_069152243.1)
chlo 5  (predict for XP_069152244.1)
chlo 5  (predict for XP_069152245.1)
chlo 5  (predict for XP_069152246.1)
chlo 5  (predict for XP_069152247.1)
chlo 5  (predict for XP_069152248.1)
chlo 5  (predict for XP_069152249.1)
chlo 5  (predict for XP_069152250.1)
chlo 5  (predict for XP_069152251.1)
chlo 5  (predict for XP_069152252.1)
chlo 5  (predict for XP_069152253.1)
chlo 5  (predict for XP_069152254.1)
chlo 5  (predict for XP_069152255.1)
chlo 5  (predict for XP_069152256.1)
chlo 5  (predict for XP_069152257.1)
chlo 5  (predict for XP_069152258.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101256354
sly-r.6
for
101256354
ath-u.5
for
AT5G40400
gma-u.5
for
100776934
vvi-u.5
for
100852903
ppo-u.5
for
7461319
mtr-u.5
for
11430173


Ortholog ID: 13461
Species sly sot nta nta ath gma bra vvi ppo mtr ghi ghi bna bna cit
Symbol LOC101256354 LOC102587608 LOC107800324 LOC107766479 AT5G40400 LOC100776934 LOC103863988 LOC100852903 LOC7461319 LOC11430173 LOC107923540 LOC107911775 LOC106446162 LOC106391033 LOC127898566
Function* pentatricopeptide repeat-containing protein At5g40400 pentatricopeptide repeat-containing protein At5g40400 uncharacterized LOC107800324 uncharacterized LOC107766479 Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At5g40400 pentatricopeptide repeat-containing protein At5g40400 pentatricopeptide repeat-containing protein At5g40400 pentatricopeptide repeat-containing protein At5g40400 pentatricopeptide repeat-containing protein At5g40400 pentatricopeptide repeat-containing protein At5g40400 pentatricopeptide repeat-containing protein At5g40400 pentatricopeptide repeat-containing protein At5g40400-like pentatricopeptide repeat-containing protein At5g40400-like pentatricopeptide repeat-containing protein At5g40400
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03022 Basal transcription factors 2
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03022 Basal transcription factors 2
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101256354 102587608 107800324 107766479 834038 100776934 103863988 100852903 7461319 11430173 107923540 107911775 106446162 106391033 127898566
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