ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sly-u.5	101256787	uncharacterized LOC101256787
sly-r.6	101256787	uncharacterized LOC101256787
sly-u.5	101251516	OPA3-like protein
sly-u.5	101266689	OPA3-like protein
sot-r.1	102584488	OPA3-like protein
sot-r.1	102590653	optic atrophy 3 protein homolog
sot-r.1	102586765	optic atrophy 3 protein homolog
nta-r.1	107772012	OPA3-like protein
nta-r.1	107769563	uncharacterized LOC107769563
nta-r.1	107759184	OPA3-like protein
ath-u.5	AT1G28510	Optic atrophy 3 protein (OPA3)
gma-u.5	100817281	OPA3-like protein
bra-r.6	103829003	OPA3-like protein
bra-r.6	103835315	OPA3-like protein
vvi-u.5	100265844	OPA3-like protein
vvi-u.5	100267816	OPA3-like protein
ppo-u.5	18103088	OPA3-like protein
mtr-u.5	11439259	optic atrophy 3 protein homolog
mtr-u.5	11441277	OPA3-like protein
ghi-r.1	121217754	OPA3-like protein
ghi-r.1	107941731	OPA3-like protein
ghi-r.1	107909504	OPA3-like protein
bna-r.1	106361681	OPA3-like protein
bna-r.1	106389636	OPA3-like protein
cit-r.1	102619764	OPA3-like protein
cit-r.1	102629720	OPA3-like protein
osa-u.5	4329131	OPA3-like protein
osa-u.5	4327695	uncharacterized LOC4327695
zma-u.5	100277999	uncharacterized LOC100277999
zma-u.5	100276616	uncharacterized LOC100276616
tae-r.2	123069484	OPA3-like protein
tae-r.2	123060932	OPA3-like protein
hvu-r.1	123443335	OPA3-like protein
sbi-r.1	8059072	OPA3-like protein
sbi-r.1	8077542	optic atrophy 3 protein homolog
sbi-r.1	8072084	optic atrophy 3 protein homolog
bdi-r.1	100842447	OPA3-like protein
bdi-r.1	100830003	OPA3-like protein
bdi-r.1	100832874	optic atrophy 3 protein homolog
cre-r.1	CHLRE_03g186150v5	uncharacterized protein

Top 50 coexpressed genes to 101256787 (sly-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 101256787 (sly-u.5 coexpression data)

CoexMap"101256787"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0019216 [list] [network] regulation of lipid metabolic process

(12 genes)

IEA

GO CC

GO:0005739 [list] [network] mitochondrion

(608 genes)

IEA

GO MF

Protein

XP_004243395.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 8, mito 1

(predict for XP_004243395.1)

Subcellular
localization
TargetP

mito 4

(predict for XP_004243395.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sly-u.5 for 101256787	sly-r.6 for 101256787	sly-u.5 for 101251516	sly-u.5 for 101266689	sot-r.1 for 102584488	sot-r.1 for 102590653	sot-r.1 for 102586765	nta-r.1 for 107772012	nta-r.1 for 107769563	nta-r.1 for 107759184	ath-u.5 for AT1G28510	gma-u.5 for 100817281	bra-r.6 for 103829003	bra-r.6 for 103835315	vvi-u.5 for 100265844	vvi-u.5 for 100267816	ppo-u.5 for 18103088	mtr-u.5 for 11439259	mtr-u.5 for 11441277	ghi-r.1 for 121217754	ghi-r.1 for 107941731	ghi-r.1 for 107909504	bna-r.1 for 106361681	bna-r.1 for 106389636	cit-r.1 for 102619764	cit-r.1 for 102629720	osa-u.5 for 4329131	osa-u.5 for 4327695	zma-u.5 for 100277999	zma-u.5 for 100276616	tae-r.2 for 123069484	tae-r.2 for 123060932	hvu-r.1 for 123443335	sbi-r.1 for 8059072	sbi-r.1 for 8077542	sbi-r.1 for 8072084	bdi-r.1 for 100842447	bdi-r.1 for 100830003	bdi-r.1 for 100832874	cre-r.1 for CHLRE_03g186150v5

Ortholog

Ortholog ID: 2566

Species

sly

sot

nta

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

uncharacterized LOC101256787

OPA3-like protein

optic atrophy 3 protein homolog

OPA3-like protein

Optic atrophy 3 protein (OPA3)

OPA3-like protein

optic atrophy 3 protein homolog

OPA3-like protein

uncharacterized LOC4327695

uncharacterized LOC100277999

uncharacterized LOC100276616

OPA3-like protein

optic atrophy 3 protein homolog

OPA3-like protein

optic atrophy 3 protein homolog

uncharacterized protein

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03050	Proteasome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04075	Plant hormone signal transduction	4
sly04626	Plant-pathogen interaction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00785	Lipoic acid metabolism	2
sot01240	Biosynthesis of cofactors	2
sot00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00400	Phenylalanine, tyrosine and tryptophan biosynthesis	2
sot01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00020	Citrate cycle (TCA cycle)	5
sot00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03060	Protein export	2
nta04144	Endocytosis	2
nta04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00020	Citrate cycle (TCA cycle)	4
nta01200	Carbon metabolism	4
nta01210	2-Oxocarboxylic acid metabolism	4
nta00940	Phenylpropanoid biosynthesis	3
nta00010	Glycolysis / Gluconeogenesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta01200	Carbon metabolism	8
nta00020	Citrate cycle (TCA cycle)	6
nta01210	2-Oxocarboxylic acid metabolism	6
nta00010	Glycolysis / Gluconeogenesis	6
nta00620	Pyruvate metabolism	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04141	Protein processing in endoplasmic reticulum	2
ath01200	Carbon metabolism	2
ath01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00020	Citrate cycle (TCA cycle)	5
gma01200	Carbon metabolism	5
gma01210	2-Oxocarboxylic acid metabolism	5
gma01230	Biosynthesis of amino acids	3
gma00230	Purine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04122	Sulfur relay system	3
vvi00790	Folate biosynthesis	2
vvi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00190	Oxidative phosphorylation	4
ghi04626	Plant-pathogen interaction	4
ghi00073	Cutin, suberine and wax biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03015	mRNA surveillance pathway	2
ghi03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03008	Ribosome biogenesis in eukaryotes	2
ghi03040	Spliceosome	2
ghi03015	mRNA surveillance pathway	2
ghi03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04146	Peroxisome	7
bna00910	Nitrogen metabolism	2
bna00220	Arginine biosynthesis	2
bna00330	Arginine and proline metabolism	2
bna01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit01200	Carbon metabolism	5
cit00020	Citrate cycle (TCA cycle)	4
cit01230	Biosynthesis of amino acids	3
cit01210	2-Oxocarboxylic acid metabolism	2
cit00640	Propanoate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03040	Spliceosome	2
osa00670	One carbon pool by folate	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03050	Proteasome	10

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma01240	Biosynthesis of cofactors	3
zma04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04141	Protein processing in endoplasmic reticulum	4
tae00230	Purine metabolism	3
tae00240	Pyrimidine metabolism	3
tae01232	Nucleotide metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu01200	Carbon metabolism	8
hvu00020	Citrate cycle (TCA cycle)	6
hvu01210	2-Oxocarboxylic acid metabolism	5
hvu01230	Biosynthesis of amino acids	4
hvu00190	Oxidative phosphorylation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03050	Proteasome	6
sbi04144	Endocytosis	3
sbi04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04141	Protein processing in endoplasmic reticulum	8
sbi03060	Protein export	3
sbi04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04136	Autophagy - other	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi01240	Biosynthesis of cofactors	2
bdi01210	2-Oxocarboxylic acid metabolism	2
bdi01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00600	Sphingolipid metabolism	2
cre04382	Cornified envelope formation	2

Expression

Expression pattern

Entrez Gene ID^*

101256787

101251516

101266689

102584488

102590653

102586765

107772012

107759184

107794614

839751

100817281

103829003

103835315

100265844

100267816

18103088

11439259

11441277

107941731

107909504

107896958

106361681

102619764

102629720

4329131

4327695

100277999

100276616

123069484

123443335

8059072

8077542

8072084

100842447

100830003

100832874

5717450

The preparation time of this page was 0.1 [sec].


Species	sly	sot	nta	ath	gma	bra	vvi	ppo	mtr	ghi	bna	cit	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	3	3	1	1	2	2	1	2	3	2	2	2	2	2	1	3	3	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 101256787 (sly-u.5 coexpression data)

Top 50 enrichment test to 101256787 (sly-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**