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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101257001   UPF0664 stress-induced protein C29B12.11c-like 
 sly-r.6   101257001   UPF0664 stress-induced protein C29B12.11c-like 
 sly-u.5   101264205   UPF0664 stress-induced protein C29B12.11c 
 sly-u.5   101252472   PH-like superfamily protein 
 sot-r.1   102604852   UPF0664 stress-induced protein C29B12.11c-like 
 sot-r.1   102604706   uncharacterized LOC102604706 
 sot-r.1   102593186   WW domain-binding protein 2-like 
 nta-r.1   107822544   uncharacterized LOC107822544 
 nta-r.1   107830174   uncharacterized LOC107830174 
 nta-r.1   107812457   UPF0664 stress-induced protein C29B12.11c 
 ath-u.5   AT5G11680   classical AGP protein 
 gma-u.5   100500660   uncharacterized LOC100500660 
 gma-u.5   100526945   uncharacterized LOC100526945 
 bra-r.6   103855921   UPF0664 stress-induced protein C29B12.11c 
 vvi-u.5   100246511   UPF0664 stress-induced protein C29B12.11c 
 ppo-u.5   7477771   UPF0664 stress-induced protein C29B12.11c 
 ppo-u.5   7497564   UPF0664 stress-induced protein C29B12.11c 
 mtr-u.5   25501534   UPF0664 stress-induced protein C29B12.11c 
 ghi-r.1   107936318   UPF0664 stress-induced protein C29B12.11c 
 ghi-r.1   121204733   UPF0664 stress-induced protein C29B12.11c 
 bna-r.1   106429901   UPF0664 stress-induced protein C29B12.11c 
 bna-r.1   106358526   UPF0664 stress-induced protein C29B12.11c 
 cit-r.1   102610669   uncharacterized LOC102610669 
 osa-u.5   4347553   UPF0664 stress-induced protein C29B12.11c 
 zma-u.5   103645155   uncharacterized LOC103645155 
 zma-u.5   103643774   Plasma membrane 
 zma-u.5   103648406   uncharacterized LOC103648406 
 tae-r.2   123104373   UPF0664 stress-induced protein C29B12.11c 
 tae-r.2   123112655   UPF0664 stress-induced protein C29B12.11c 
 tae-r.2   123122148   UPF0664 stress-induced protein C29B12.11c 
 hvu-r.1   123399858   UPF0664 stress-induced protein C29B12.11c 
 sbi-r.1   110432315   UPF0664 stress-induced protein C29B12.11c 
 bdi-r.1   100825658   UPF0664 stress-induced protein C29B12.11c 
 cre-r.1   CHLRE_03g189100v5   uncharacterized protein 

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Top 50 coexpressed genes to 101257001 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101257001 (sly-u.5 coexpression data)

CoexMap"101257001"


slyLOC101257001 | Entrez gene ID : 101257001      
Species sly sot nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 4 3 3 1 2 1 1 2 1 2 2 1 1 3 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0045893 [list] [network] positive regulation of DNA-templated transcription  (243 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2947 genes)  IEA  
GO MF
GO:0031490 [list] [network] chromatin DNA binding  (39 genes)  IEA  
GO:0003713 [list] [network] transcription coactivator activity  (45 genes)  IEA  
Protein XP_004228894.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  cysk 2,  cyto_pero 2,  cysk_plas 1  (predict for XP_004228894.2)
Subcellular
localization
TargetP
scret 8,  other 4  (predict for XP_004228894.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101257001
sly-r.6
for
101257001
sly-u.5
for
101264205
sly-u.5
for
101252472
sot-r.1
for
102604852
sot-r.1
for
102604706
sot-r.1
for
102593186
nta-r.1
for
107822544
nta-r.1
for
107830174
nta-r.1
for
107812457
ath-u.5
for
AT5G11680
gma-u.5
for
100500660
gma-u.5
for
100526945
bra-r.6
for
103855921
vvi-u.5
for
100246511
ppo-u.5
for
7477771
ppo-u.5
for
7497564
mtr-u.5
for
25501534
ghi-r.1
for
107936318
ghi-r.1
for
121204733
bna-r.1
for
106429901
bna-r.1
for
106358526
cit-r.1
for
102610669
osa-u.5
for
4347553
zma-u.5
for
103645155
zma-u.5
for
103643774
zma-u.5
for
103648406
tae-r.2
for
123104373
tae-r.2
for
123112655
tae-r.2
for
123122148
hvu-r.1
for
123399858
sbi-r.1
for
110432315
bdi-r.1
for
100825658
cre-r.1
for
CHLRE_03g189100v5


Ortholog ID: 5828
Species sly sly sly sot sot sot nta nta nta ath gma gma bra vvi ppo ppo mtr ghi ghi bna bna cit osa zma zma zma tae tae tae hvu sbi bdi cre
Symbol LOC101257001 LOC101264205 LOC101252472 LOC102604852 LOC102604706 LOC102593186 LOC107830174 LOC107812457 LOC107769958 AT5G11680 LOC100500660 LOC100526945 LOC103855921 LOC100246511 LOC7477771 LOC7497564 LOC25501534 LOC107936318 LOC121204733 LOC106429901 LOC106358526 LOC102610669 LOC4347553 LOC103643774 LOC103633000 LOC100281165 LOC123104373 LOC123112655 LOC123122148 LOC123399858 LOC110432315 LOC100825658 CHLRE_03g189100v5
Function* UPF0664 stress-induced protein C29B12.11c-like UPF0664 stress-induced protein C29B12.11c PH-like superfamily protein UPF0664 stress-induced protein C29B12.11c-like uncharacterized LOC102604706 WW domain-binding protein 2-like uncharacterized LOC107830174 UPF0664 stress-induced protein C29B12.11c UPF0664 stress-induced protein C29B12.11c classical AGP protein uncharacterized LOC100500660 uncharacterized LOC100526945 UPF0664 stress-induced protein C29B12.11c UPF0664 stress-induced protein C29B12.11c UPF0664 stress-induced protein C29B12.11c UPF0664 stress-induced protein C29B12.11c UPF0664 stress-induced protein C29B12.11c UPF0664 stress-induced protein C29B12.11c UPF0664 stress-induced protein C29B12.11c UPF0664 stress-induced protein C29B12.11c UPF0664 stress-induced protein C29B12.11c uncharacterized LOC102610669 UPF0664 stress-induced protein C29B12.11c Plasma membrane UPF0664 stress-induced protein C29B12.11c arabinogalactan protein UPF0664 stress-induced protein C29B12.11c UPF0664 stress-induced protein C29B12.11c UPF0664 stress-induced protein C29B12.11c UPF0664 stress-induced protein C29B12.11c UPF0664 stress-induced protein C29B12.11c UPF0664 stress-induced protein C29B12.11c uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 7
sot04144 Endocytosis 3
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00730 Thiamine metabolism 2
nta00190 Oxidative phosphorylation 2
nta04141 Protein processing in endoplasmic reticulum 2
nta00750 Vitamin B6 metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 2
nta04145 Phagosome 2
nta04148 Efferocytosis 2
nta00030 Pentose phosphate pathway 2
nta01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
nta04382 Cornified envelope formation 2
nta00030 Pentose phosphate pathway 2
nta01200 Carbon metabolism 2
nta00071 Fatty acid degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 5
ath04120 Ubiquitin mediated proteolysis 2
ath04141 Protein processing in endoplasmic reticulum 2
ath04142 Lysosome 2
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 4
gma04145 Phagosome 3
gma04148 Efferocytosis 3
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 3
vvi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04136 Autophagy - other 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 8
ghi03083 Polycomb repressive complex 6
ghi04141 Protein processing in endoplasmic reticulum 6
ghi04145 Phagosome 5
ghi04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 8
ghi03083 Polycomb repressive complex 6
ghi04141 Protein processing in endoplasmic reticulum 6
ghi04145 Phagosome 5
ghi04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 7
bna03083 Polycomb repressive complex 6
bna04141 Protein processing in endoplasmic reticulum 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03083 Polycomb repressive complex 4
bna04120 Ubiquitin mediated proteolysis 4
bna04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03050 Proteasome 7
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04130 SNARE interactions in vesicular transport 3
osa04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04136 Autophagy - other 6
zma04144 Endocytosis 2
zma04145 Phagosome 2
zma04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00270 Cysteine and methionine metabolism 3
hvu04148 Efferocytosis 3
hvu01230 Biosynthesis of amino acids 2
hvu00071 Fatty acid degradation 2
hvu00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 4
sbi04136 Autophagy - other 3
sbi04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 2
bdi04141 Protein processing in endoplasmic reticulum 2
bdi04075 Plant hormone signal transduction 2
bdi03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101257001 101264205 101252472 102604852 102604706 102593186 107830174 107812457 107769958 831040 100500660 100526945 103855921 100246511 7477771 7497564 25501534 107936318 121204733 106429901 106358526 102610669 4347553 103643774 103633000 100281165 123104373 123112655 123122148 123399858 110432315 100825658 5717496
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