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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101257186   photosystem I chlorophyll a/b-binding protein 5, chloroplastic 
 sly-r.6   101257186   photosystem I chlorophyll a/b-binding protein 5, chloroplastic 
 ath-u.5   Lhca5   photosystem I light harvesting complex protein 5 
 gma-u.5   100804934   photosystem I chlorophyll a/b-binding protein 5, chloroplastic 
 vvi-u.5   100255844   photosystem I chlorophyll a/b-binding protein 5, chloroplastic 
 ppo-u.5   18104896   photosystem I chlorophyll a/b-binding protein 5, chloroplastic 
 mtr-u.5   11431390   photosystem I chlorophyll a/b-binding protein 5, chloroplastic 
 osa-u.5   4330828   photosystem I chlorophyll a/b-binding protein 5, chloroplastic 
 zma-u.5   100281795   light harvesting complex a/b protein4 

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Top 50 coexpressed genes to 101257186 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101257186 (sly-u.5 coexpression data)

CoexMap"101257186"


slyLOC101257186 | Entrez gene ID : 101257186      
Species sly ath gma vvi ppo mtr osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 2 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly00196 [list] [network] Photosynthesis - antenna proteins (29 genes)
GO BP
GO:0009768 [list] [network] photosynthesis, light harvesting in photosystem I  (29 genes)  IEA  
GO:0009416 [list] [network] response to light stimulus  (118 genes)  IEA  
GO CC
GO:0016020 [list] [network] membrane  (3085 genes)  IEA  
GO MF
Protein XP_004242951.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  nucl 1,  mito 1,  extr 1,  vacu 1,  E.R. 1,  E.R._vacu 1  (predict for XP_004242951.1)
Subcellular
localization
TargetP
chlo 6  (predict for XP_004242951.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101257186

.
sly-r.6
for
101257186

.
ath-u.5
for
Lhca5

.
gma-u.5
for
100804934

.
vvi-u.5
for
100255844

.
ppo-u.5
for
18104896

.
mtr-u.5
for
11431390

.
osa-u.5
for
4330828

.
zma-u.5
for
100281795

.


Ortholog ID: 9827
Species ath gma sly osa zma vvi ppo mtr tae tae hvu ghi ghi bna bna cre cre sbi sot cit bdi nta nta
Symbol Lhca5 LOC100804934 LOC101257186 LOC4330828 LOC100281795 LOC100255844 LOC18104896 LOC11431390 LOC123138360 LOC123145600 LOC123404545 LOC121203567 LOC107918058 LOC106371873 LOC106380622 CHLRE_16g687900v5 CHLRE_06g272650v5 LOC8075198 LOC102590384 LOC102613058 LOC100835021 LOC107775375 LOC107774945
Function* photosystem I light harvesting complex protein 5 photosystem I chlorophyll a/b-binding protein 5, chloroplastic photosystem I chlorophyll a/b-binding protein 5, chloroplastic photosystem I chlorophyll a/b-binding protein 5, chloroplastic light harvesting complex a/b protein4 photosystem I chlorophyll a/b-binding protein 5, chloroplastic photosystem I chlorophyll a/b-binding protein 5, chloroplastic photosystem I chlorophyll a/b-binding protein 5, chloroplastic photosystem I chlorophyll a/b-binding protein 5, chloroplastic photosystem I chlorophyll a/b-binding protein 5, chloroplastic photosystem I chlorophyll a/b-binding protein 5, chloroplastic photosystem I chlorophyll a/b-binding protein 5, chloroplastic photosystem I chlorophyll a/b-binding protein 5, chloroplastic photosystem I chlorophyll a/b-binding protein 5, chloroplastic photosystem I chlorophyll a/b-binding protein 5, chloroplastic-like uncharacterized protein uncharacterized protein photosystem I chlorophyll a/b-binding protein 5, chloroplastic chlorophyll a-b binding protein P4, chloroplastic photosystem I chlorophyll a/b-binding protein 5, chloroplastic photosystem I chlorophyll a/b-binding protein 5, chloroplastic photosystem I chlorophyll a/b-binding protein 5, chloroplastic photosystem I chlorophyll a/b-binding protein 5, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 6
ath01200 Carbon metabolism 4
ath00710 Carbon fixation by Calvin cycle 3
ath00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 7
sly01200 Carbon metabolism 6
sly00630 Glyoxylate and dicarboxylate metabolism 3
sly00710 Carbon fixation by Calvin cycle 3
sly00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01200 Carbon metabolism 5
osa00710 Carbon fixation by Calvin cycle 4
osa00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 4
zma01200 Carbon metabolism 4
zma00710 Carbon fixation by Calvin cycle 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 5
vvi00196 Photosynthesis - antenna proteins 4
vvi01200 Carbon metabolism 3
vvi00630 Glyoxylate and dicarboxylate metabolism 2
vvi00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00196 Photosynthesis - antenna proteins 9
ppo00195 Photosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00710 Carbon fixation by Calvin cycle 5
mtr01200 Carbon metabolism 5
mtr00195 Photosynthesis 3
mtr00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01200 Carbon metabolism 8
tae00195 Photosynthesis 7
tae00710 Carbon fixation by Calvin cycle 4
tae00190 Oxidative phosphorylation 4
tae00260 Glycine, serine and threonine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01200 Carbon metabolism 6
tae00710 Carbon fixation by Calvin cycle 3
tae00195 Photosynthesis 3
tae00260 Glycine, serine and threonine metabolism 3
tae00630 Glyoxylate and dicarboxylate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 4
ghi00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 4
ghi00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00710 Carbon fixation by Calvin cycle 5
bna01200 Carbon metabolism 5
bna00195 Photosynthesis 3
bna00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00710 Carbon fixation by Calvin cycle 5
bna01200 Carbon metabolism 5
bna00195 Photosynthesis 3
bna00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00196 Photosynthesis - antenna proteins 10
cre00195 Photosynthesis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00196 Photosynthesis - antenna proteins 10
cre00195 Photosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 7
cit00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 4
bdi00630 Glyoxylate and dicarboxylate metabolism 3
bdi00260 Glycine, serine and threonine metabolism 2
bdi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00630 Glyoxylate and dicarboxylate metabolism 5
nta01200 Carbon metabolism 5
nta00260 Glycine, serine and threonine metabolism 4
nta00460 Cyanoamino acid metabolism 4
nta00670 One carbon pool by folate 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00630 Glyoxylate and dicarboxylate metabolism 5
nta01200 Carbon metabolism 5
nta00260 Glycine, serine and threonine metabolism 4
nta00460 Cyanoamino acid metabolism 4
nta00670 One carbon pool by folate 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 841099 100804934 101257186 4330828 100281795 100255844 18104896 11431390 123138360 123145600 123404545 121203567 107918058 106371873 106380622 5717675 5721808 8075198 102590384 102613058 100835021 107775375 107774945
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