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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101257268   long chain base biosynthesis protein 2a-like 
 sly-r.6   101257268   long chain base biosynthesis protein 2a-like 
 sly-u.5   101246439   long chain base biosynthesis protein 2a-like 
 sly-u.5   101254177   serine palmitoyltransferase 
 sot-r.1   102594988   long chain base biosynthesis protein 2a-like 
 sot-r.1   102580157   long chain base biosynthesis protein 2b 
 nta-r.1   107808909   long chain base biosynthesis protein 2a 
 nta-r.1   107770386   long chain base biosynthesis protein 2a 
 ath-u.5   SPT1   serine palmitoyltransferase 1 
 ath-u.5   LCB2   long chain base2 
 gma-u.5   100803194   long chain base biosynthesis protein 2a 
 gma-u.5   100789635   long chain base biosynthesis protein 2a 
 bra-r.6   103873514   long chain base biosynthesis protein 2b-like 
 bra-r.6   103874866   long chain base biosynthesis protein 2b 
 bra-r.6   LCB2   long chain base biosynthesis protein 2b 
 vvi-u.5   100249818   long chain base biosynthesis protein 2a 
 vvi-u.5   100249169   long chain base biosynthesis protein 2a 
 ppo-u.5   7486392   long chain base biosynthesis protein 2a 
 ppo-u.5   7454589   long chain base biosynthesis protein 2a 
 mtr-u.5   25495905   long chain base biosynthesis protein 2a 
 ghi-r.1   107944555   long chain base biosynthesis protein 2a 
 ghi-r.1   107946876   long chain base biosynthesis protein 2a 
 bna-r.1   106447550   long chain base biosynthesis protein 2b 
 bna-r.1   106387825   long chain base biosynthesis protein 2b 
 bna-r.1   125575800   long chain base biosynthesis protein 2b-like 
 cit-r.1   102617633   long chain base biosynthesis protein 2a 
 cit-r.1   102616935   long chain base biosynthesis protein 2a-like 
 osa-u.5   4350591   long chain base biosynthesis protein 2a-like 
 zma-u.5   100285632   uncharacterized LOC100285632 
 zma-u.5   732780   long chain base biosynthesis protein 2d 
 zma-u.5   103648713   long chain base biosynthesis protein 2a 
 tae-r.2   123080394   long chain base biosynthesis protein 2d 
 tae-r.2   123072112   long chain base biosynthesis protein 2d 
 tae-r.2   123063208   long chain base biosynthesis protein 2d 
 hvu-r.1   123445320   long chain base biosynthesis protein 2d 
 sbi-r.1   8055035   long chain base biosynthesis protein 2a 
 sbi-r.1   8055036   long chain base biosynthesis protein 2a 
 sbi-r.1   8059396   long chain base biosynthesis protein 2d 
 bdi-r.1   100839037   long chain base biosynthesis protein 2a 
 bdi-r.1   100835314   long chain base biosynthesis protein 2d 
 cre-r.1   CHLRE_04g230144v5   uncharacterized protein 

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Top 50 coexpressed genes to 101257268 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101257268 (sly-u.5 coexpression data)

CoexMap"101257268"


slyLOC101257268 | Entrez gene ID : 101257268    
Species sly sot nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 4 2 2 2 2 3 2 2 1 2 3 2 1 3 3 1 3 2 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly00600 [list] [network] Sphingolipid metabolism (34 genes)
sly04382 [list] [network] Cornified envelope formation (35 genes)
GO BP
GO:0046512 [list] [network] sphingosine biosynthetic process  (9 genes)  IEA  
GO:0046513 [list] [network] ceramide biosynthetic process  (15 genes)  IEA  
GO CC
GO:0017059 [list] [network] serine palmitoyltransferase complex  (3 genes)  IEA  
GO MF
GO:0004758 [list] [network] serine C-palmitoyltransferase activity  (5 genes)  IEA  
GO:0030170 [list] [network] pyridoxal phosphate binding  (115 genes)  IEA  
Protein XP_019069884.2 [sequence] [blastp]
XP_025887213.2 [sequence] [blastp]
XP_069155226.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  chlo 3,  cyto_E.R. 3  (predict for XP_019069884.2)
chlo 6,  extr 1,  nucl 1,  cyto 1,  plas 1,  vacu 1,  cyto_nucl 1,  nucl_plas 1,  cyto_plas 1  (predict for XP_025887213.2)
cyto 6,  cyto_nucl 4,  mito 1,  nucl 1,  chlo_mito 1  (predict for XP_069155226.1)
Subcellular
localization
TargetP
scret 9  (predict for XP_019069884.2)
scret 9  (predict for XP_025887213.2)
other 8  (predict for XP_069155226.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101257268
sly-r.6
for
101257268
sly-u.5
for
101246439
sly-u.5
for
101254177
sot-r.1
for
102594988
sot-r.1
for
102580157
nta-r.1
for
107808909
nta-r.1
for
107770386
ath-u.5
for
SPT1
ath-u.5
for
LCB2
gma-u.5
for
100803194
gma-u.5
for
100789635
bra-r.6
for
103873514
bra-r.6
for
103874866
bra-r.6
for
LCB2
vvi-u.5
for
100249818
vvi-u.5
for
100249169
ppo-u.5
for
7486392
ppo-u.5
for
7454589
mtr-u.5
for
25495905
ghi-r.1
for
107944555
ghi-r.1
for
107946876
bna-r.1
for
106447550
bna-r.1
for
106387825
bna-r.1
for
125575800
cit-r.1
for
102617633
cit-r.1
for
102616935
osa-u.5
for
4350591
zma-u.5
for
100285632
zma-u.5
for
732780
zma-u.5
for
103648713
tae-r.2
for
123080394
tae-r.2
for
123072112
tae-r.2
for
123063208
hvu-r.1
for
123445320
sbi-r.1
for
8055035
sbi-r.1
for
8055036
sbi-r.1
for
8059396
bdi-r.1
for
100839037
bdi-r.1
for
100835314
cre-r.1
for
CHLRE_04g230144v5


Ortholog ID: 3814
Species sly sly sly sot sot nta nta ath ath gma gma bra bra bra vvi vvi ppo ppo mtr ghi ghi bna bna bna cit cit osa zma zma zma tae tae tae hvu sbi sbi sbi bdi bdi cre
Symbol LOC101257268 LOC101246439 LOC101254177 LOC102594988 LOC102580157 LOC107808909 LOC107770386 SPT1 LCB2 LOC100803194 LOC100789635 LOC103873514 LOC103874866 LCB2 LOC100249818 LOC100249169 LOC7486392 LOC7454589 LOC25495905 LOC107944555 LOC107946876 LOC106387825 LOC125575800 LOC106353243 LOC102617633 LOC102616935 LOC4326966 LOC100285632 LOC732780 LOC103652945 LOC123080394 LOC123072112 LOC123063208 LOC123445320 LOC8055035 LOC8055036 LOC8059396 LOC100839037 LOC100835314 CHLRE_04g230144v5
Function* long chain base biosynthesis protein 2a-like long chain base biosynthesis protein 2a-like serine palmitoyltransferase long chain base biosynthesis protein 2a-like long chain base biosynthesis protein 2b long chain base biosynthesis protein 2a long chain base biosynthesis protein 2a serine palmitoyltransferase 1 long chain base2 long chain base biosynthesis protein 2a long chain base biosynthesis protein 2a long chain base biosynthesis protein 2b-like long chain base biosynthesis protein 2b long chain base biosynthesis protein 2b long chain base biosynthesis protein 2a long chain base biosynthesis protein 2a long chain base biosynthesis protein 2a long chain base biosynthesis protein 2a long chain base biosynthesis protein 2a long chain base biosynthesis protein 2a long chain base biosynthesis protein 2a long chain base biosynthesis protein 2b long chain base biosynthesis protein 2b-like long chain base biosynthesis protein 2b-like long chain base biosynthesis protein 2a long chain base biosynthesis protein 2a-like long chain base biosynthesis protein 2d-like uncharacterized LOC100285632 long chain base biosynthesis protein 2d long chain base biosynthesis protein 2a long chain base biosynthesis protein 2d long chain base biosynthesis protein 2d long chain base biosynthesis protein 2d long chain base biosynthesis protein 2d long chain base biosynthesis protein 2a long chain base biosynthesis protein 2a long chain base biosynthesis protein 2d long chain base biosynthesis protein 2a long chain base biosynthesis protein 2d uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00940 Phenylpropanoid biosynthesis 3
sly00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 2
sly04626 Plant-pathogen interaction 2
sly04144 Endocytosis 2
sly04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 2
sot00600 Sphingolipid metabolism 2
sot04382 Cornified envelope formation 2
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00600 Sphingolipid metabolism 2
sot04382 Cornified envelope formation 2
sot04144 Endocytosis 2
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 3
nta00600 Sphingolipid metabolism 2
nta04382 Cornified envelope formation 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 4
nta03015 mRNA surveillance pathway 2
nta03040 Spliceosome 2
nta00600 Sphingolipid metabolism 2
nta04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00600 Sphingolipid metabolism 4
gma04382 Cornified envelope formation 4
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04382 Cornified envelope formation 3
gma00600 Sphingolipid metabolism 2
gma04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00053 Ascorbate and aldarate metabolism 2
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04130 SNARE interactions in vesicular transport 3
bra04120 Ubiquitin mediated proteolysis 2
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04626 Plant-pathogen interaction 4
vvi00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01200 Carbon metabolism 4
vvi01230 Biosynthesis of amino acids 4
vvi00010 Glycolysis / Gluconeogenesis 3
vvi00620 Pyruvate metabolism 2
vvi00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04145 Phagosome 5
ppo04144 Endocytosis 3
ppo04148 Efferocytosis 3
ppo04382 Cornified envelope formation 3
ppo00061 Fatty acid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00600 Sphingolipid metabolism 2
ghi04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00600 Sphingolipid metabolism 2
ghi04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00600 Sphingolipid metabolism 4
bna04382 Cornified envelope formation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00600 Sphingolipid metabolism 4
bna04382 Cornified envelope formation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00600 Sphingolipid metabolism 4
bna04382 Cornified envelope formation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00500 Starch and sucrose metabolism 2
cit04382 Cornified envelope formation 2
cit00600 Sphingolipid metabolism 2
cit00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03082 ATP-dependent chromatin remodeling 2
cit00600 Sphingolipid metabolism 2
cit04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00600 Sphingolipid metabolism 4
zma04382 Cornified envelope formation 4
zma00520 Amino sugar and nucleotide sugar metabolism 3
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00513 Various types of N-glycan biosynthesis 3
zma00600 Sphingolipid metabolism 2
zma04382 Cornified envelope formation 2
zma00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00600 Sphingolipid metabolism 7
tae04382 Cornified envelope formation 7
tae00250 Alanine, aspartate and glutamate metabolism 2
tae00520 Amino sugar and nucleotide sugar metabolism 2
tae01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00600 Sphingolipid metabolism 8
tae04382 Cornified envelope formation 8
tae00250 Alanine, aspartate and glutamate metabolism 3
tae00520 Amino sugar and nucleotide sugar metabolism 3
tae01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00600 Sphingolipid metabolism 9
tae04382 Cornified envelope formation 9
tae00250 Alanine, aspartate and glutamate metabolism 3
tae00520 Amino sugar and nucleotide sugar metabolism 3
tae01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
hvu01230 Biosynthesis of amino acids 2
hvu04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00600 Sphingolipid metabolism 3
sbi04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00600 Sphingolipid metabolism 2
sbi04382 Cornified envelope formation 2
sbi02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00600 Sphingolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00600 Sphingolipid metabolism 2
cre04382 Cornified envelope formation 2
cre00564 Glycerophospholipid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101257268 101246439 101254177 102594988 102580157 107808909 107770386 824039 832432 100803194 100789635 103873514 103874866 103873516 100249818 100249169 7486392 7454589 25495905 107944555 107946876 106387825 125575800 106353243 102617633 102616935 4326966 100285632 732780 103652945 123080394 123072112 123063208 123445320 8055035 8055036 8059396 100839037 100835314 5717833
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