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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   TRM5   TONNEAU1 recruiting motif 5 
 sly-r.6   TRM5   TONNEAU1 recruiting motif 5 
 sot-r.1   102579269   protein LONGIFOLIA 1 
 nta-r.1   107815695   protein LONGIFOLIA 1 
 nta-r.1   107822253   protein LONGIFOLIA 1 
 ath-u.5   TRM5   zinc finger CCCH domain protein 
 gma-u.5   100814119   protein LONGIFOLIA 1 
 gma-u.5   100777397   protein LONGIFOLIA 1 
 bra-r.6   103842129   uncharacterized LOC103842129 
 vvi-u.5   100266517   protein LONGIFOLIA 2 
 ppo-u.5   7454314   protein LONGIFOLIA 1 
 ppo-u.5   7480008   protein LONGIFOLIA 1 
 mtr-u.5   25499184   protein LONGIFOLIA 1 
 mtr-u.5   11423122   protein LONGIFOLIA 2 
 ghi-r.1   107915274   protein LONGIFOLIA 1 
 ghi-r.1   107924198   protein LONGIFOLIA 2 
 ghi-r.1   107924235   protein LONGIFOLIA 1 
 bna-r.1   111200376   uncharacterized LOC111200376 
 cit-r.1   102612778   protein LONGIFOLIA 1 
 osa-u.5   4350805   uncharacterized LOC4350805 
 zma-u.5   103654541   serine/arginine repetitive matrix protein 1 
 tae-r.2   123117381   uncharacterized LOC123117381 
 tae-r.2   123149029   serine/arginine repetitive matrix protein 1 
 hvu-r.1   123407828   serine/arginine repetitive matrix protein 1 
 sbi-r.1   8071982   serine/arginine repetitive matrix protein 1 

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Top 50 coexpressed genes to TRM5 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to TRM5 (sly-u.5 coexpression data)

CoexMap"101258383"


slyTRM5 | Entrez gene ID : 101258383      
Species sly sot nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 2 1 2 1 2 1 1 2 2 3 1 1 1 1 2 1 1 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0051513 [list] [network] regulation of monopolar cell growth  (3 genes)  IEA  
GO CC
GO MF
Protein NP_001359176.1 [sequence] [blastp]
NP_001359181.1 [sequence] [blastp]
XP_010323341.2 [sequence] [blastp]
XP_069155904.1 [sequence] [blastp]
XP_069155905.1 [sequence] [blastp]
XP_069155906.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  cyto 1,  mito 1,  cysk 1  (predict for NP_001359176.1)
nucl 8,  cyto 1,  mito 1,  cysk 1  (predict for NP_001359181.1)
nucl 8,  chlo 1,  cyto 1,  cysk 1  (predict for XP_010323341.2)
nucl 9,  cyto 1,  cysk 1  (predict for XP_069155904.1)
nucl 8,  chlo 1,  cyto 1,  cysk 1  (predict for XP_069155905.1)
nucl 8,  chlo 1,  cyto 1,  cysk 1  (predict for XP_069155906.1)
Subcellular
localization
TargetP
other 8,  mito 3  (predict for NP_001359176.1)
other 8,  mito 3  (predict for NP_001359181.1)
other 8,  mito 3  (predict for XP_010323341.2)
other 8,  mito 3  (predict for XP_069155904.1)
other 8,  mito 3  (predict for XP_069155905.1)
other 8,  mito 3  (predict for XP_069155906.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
TRM5
sly-r.6
for
TRM5
sot-r.1
for
102579269
nta-r.1
for
107815695
nta-r.1
for
107822253
ath-u.5
for
TRM5
gma-u.5
for
100814119
gma-u.5
for
100777397
bra-r.6
for
103842129
vvi-u.5
for
100266517
ppo-u.5
for
7454314
ppo-u.5
for
7480008
mtr-u.5
for
25499184
mtr-u.5
for
11423122
ghi-r.1
for
107915274
ghi-r.1
for
107924198
ghi-r.1
for
107924235
bna-r.1
for
111200376
cit-r.1
for
102612778
osa-u.5
for
4350805
zma-u.5
for
103654541
tae-r.2
for
123117381
tae-r.2
for
123149029
hvu-r.1
for
123407828
sbi-r.1
for
8071982


Ortholog ID: 7638
Species sly sot nta nta ath gma gma bra vvi ppo ppo mtr mtr ghi ghi ghi bna cit osa zma tae tae hvu sbi
Symbol TRM5 LOC102579269 LOC107815695 LOC107822253 TRM5 LOC100814119 LOC100777397 LOC103842129 LOC100266517 LOC7454314 LOC7480008 LOC25499184 LOC11423122 LOC107915274 LOC107924235 LOC107955485 LOC111200376 LOC102612778 LOC4350805 LOC103654541 LOC123117381 LOC123166212 LOC123407828 LOC8071982
Function* TONNEAU1 recruiting motif 5 protein LONGIFOLIA 1 protein LONGIFOLIA 1 protein LONGIFOLIA 1 zinc finger CCCH domain protein protein LONGIFOLIA 1 protein LONGIFOLIA 1 uncharacterized LOC103842129 protein LONGIFOLIA 2 protein LONGIFOLIA 1 protein LONGIFOLIA 1 protein LONGIFOLIA 1 protein LONGIFOLIA 2 protein LONGIFOLIA 1 protein LONGIFOLIA 1 protein LONGIFOLIA 1 uncharacterized LOC111200376 protein LONGIFOLIA 1 uncharacterized LOC4350805 serine/arginine repetitive matrix protein 1 uncharacterized LOC123117381 uncharacterized LOC123166212 serine/arginine repetitive matrix protein 1 serine/arginine repetitive matrix protein 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 4
sot00061 Fatty acid biosynthesis 2
sot00780 Biotin metabolism 2
sot01212 Fatty acid metabolism 2
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04145 Phagosome 2
ppo04517 IgSF CAM signaling 2
ppo04814 Motor proteins 2
ppo03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03082 ATP-dependent chromatin remodeling 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101258383 102579269 107815695 107822253 825518 100814119 100777397 103842129 100266517 7454314 7480008 25499184 11423122 107915274 107924235 107955485 111200376 102612778 4350805 103654541 123117381 123166212 123407828 8071982
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