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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101258829   desiccation-related protein At2g46140-like 
 sly-r.6   101258829   desiccation-related protein At2g46140-like 
 sly-m.5   101258829   desiccation-related protein At2g46140-like 
 sly-u.5   101260160   uncharacterized LOC101260160 
 sot-r.1   102588697   uncharacterized LOC102588697 
 nta-r.1   107760858   uncharacterized LOC107760858 
 nta-r.1   107830885   uncharacterized LOC107830885 
 nta-r.1   107825011   uncharacterized LOC107825011 
 ath-u.5   AT2G44060   Late embryogenesis abundant protein, group 2 
 gma-u.5   LEA-1   late-embryogenesis abundant protein 1 
 gma-u.5   LEA-2   desiccation-related protein At2g46140-like 
 gma-u.5   100800203   putative late embryogenesis abundant protein 
 bra-r.6   103858115   uncharacterized LOC103858115 
 bra-r.6   103866119   uncharacterized LOC103866119 
 vvi-u.5   100266227   hypothetical protein 
 ppo-u.5   7465602   desiccation-related protein At2g46140 
 mtr-u.5   25488885   uncharacterized LOC25488885 
 mtr-u.5   11421452   uncharacterized LOC11421452 
 ghi-r.1   107942991   uncharacterized LOC107942991 
 ghi-r.1   107939681   uncharacterized LOC107939681 
 bna-r.1   106429285   uncharacterized LOC106429285 
 bna-r.1   111215185   uncharacterized LOC111215185 
 bna-r.1   106438206   uncharacterized LOC106438206 
 cit-r.1   102624690   uncharacterized LOC102624690 
 osa-u.5   4334748   uncharacterized LOC4334748 
 zma-u.5   100191638   uncharacterized LOC100191638 
 zma-u.5   100383741   Late embryogenesis abundant protein group 2 
 hvu-r.1   123395040   uncharacterized LOC123395040 
 sbi-r.1   110431230   desiccation-related protein At2g46140 
 sbi-r.1   8084600   uncharacterized LOC8084600 
 bdi-r.1   100833662   uncharacterized LOC100833662 

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Top 50 coexpressed genes to 101258829 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101258829 (sly-u.5 coexpression data)

CoexMap"101258829"


slyLOC101258829 | Entrez gene ID : 101258829    
Species sly sot nta ath gma bra vvi ppo mtr ghi bna cit osa zma hvu sbi bdi cre tae
Paralog 4 1 3 1 3 2 1 1 2 2 3 1 1 2 1 2 1 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009269 [list] [network] response to desiccation  (6 genes)  IEA  
GO CC
GO:0005829 [list] [network] cytosol  (916 genes)  IEA  
GO MF
Protein XP_004251970.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  mito 3,  cyto_nucl 3  (predict for XP_004251970.1)
Subcellular
localization
TargetP
other 9  (predict for XP_004251970.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101258829
sly-r.6
for
101258829
sly-m.5
for
101258829
sly-u.5
for
101260160
sot-r.1
for
102588697
nta-r.1
for
107760858
nta-r.1
for
107830885
nta-r.1
for
107825011
ath-u.5
for
AT2G44060
gma-u.5
for
LEA-1
gma-u.5
for
LEA-2
gma-u.5
for
100800203
bra-r.6
for
103858115
bra-r.6
for
103866119
vvi-u.5
for
100266227
ppo-u.5
for
7465602
mtr-u.5
for
25488885
mtr-u.5
for
11421452
ghi-r.1
for
107942991
ghi-r.1
for
107939681
bna-r.1
for
106429285
bna-r.1
for
111215185
bna-r.1
for
106438206
cit-r.1
for
102624690
osa-u.5
for
4334748
zma-u.5
for
100191638
zma-u.5
for
100383741
hvu-r.1
for
123395040
sbi-r.1
for
110431230
sbi-r.1
for
8084600
bdi-r.1
for
100833662


Ortholog ID: 5090
Species sly sly sot nta nta nta ath gma gma gma bra bra vvi ppo mtr mtr ghi ghi bna bna bna cit osa zma zma tae tae tae hvu sbi sbi bdi
Symbol LOC101258829 LOC101260160 LOC102588697 LOC107760858 LOC107830885 LOC107825011 AT2G44060 LEA-1 LEA-2 LOC100800203 LOC103858115 LOC103866119 LOC100266227 LOC7465602 LOC25488885 LOC11421452 LOC107942991 LOC107939681 LOC106429285 LOC111215185 LOC106438206 LOC102624690 LOC4334748 LOC100191638 LOC100383741 LOC123087672 LOC123114265 LOC123123751 LOC123395040 LOC110431230 LOC8084600 LOC100833662
Function* desiccation-related protein At2g46140-like uncharacterized LOC101260160 uncharacterized LOC102588697 uncharacterized LOC107760858 uncharacterized LOC107830885 uncharacterized LOC107825011 Late embryogenesis abundant protein, group 2 late-embryogenesis abundant protein 1 desiccation-related protein At2g46140-like putative late embryogenesis abundant protein uncharacterized LOC103858115 uncharacterized LOC103866119 hypothetical protein desiccation-related protein At2g46140 uncharacterized LOC25488885 uncharacterized LOC11421452 uncharacterized LOC107942991 uncharacterized LOC107939681 uncharacterized LOC106429285 uncharacterized LOC111215185 uncharacterized LOC106438206 uncharacterized LOC102624690 uncharacterized LOC4334748 uncharacterized LOC100191638 Late embryogenesis abundant protein group 2 uncharacterized LOC123087672 uncharacterized LOC123114265 uncharacterized LOC123123751 uncharacterized LOC123395040 desiccation-related protein At2g46140 uncharacterized LOC8084600 uncharacterized LOC100833662
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00190 Oxidative phosphorylation 5
sly04141 Protein processing in endoplasmic reticulum 3
sly04145 Phagosome 2
sly04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00190 Oxidative phosphorylation 7
sot04145 Phagosome 5
sot01210 2-Oxocarboxylic acid metabolism 2
sot01230 Biosynthesis of amino acids 2
sot04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 6
nta03015 mRNA surveillance pathway 4
nta04141 Protein processing in endoplasmic reticulum 4
nta00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 6
nta03015 mRNA surveillance pathway 4
nta04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 6
nta04141 Protein processing in endoplasmic reticulum 4
nta03015 mRNA surveillance pathway 3
nta00510 N-Glycan biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00190 Oxidative phosphorylation 9
ath04145 Phagosome 9
ath04142 Lysosome 3
ath04144 Endocytosis 3
ath00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04142 Lysosome 4
gma00562 Inositol phosphate metabolism 2
gma04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 2
gma00520 Amino sugar and nucleotide sugar metabolism 2
gma01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 4
bra04145 Phagosome 4
bra04148 Efferocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00010 Glycolysis / Gluconeogenesis 2
bra00620 Pyruvate metabolism 2
bra01200 Carbon metabolism 2
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00190 Oxidative phosphorylation 4
ppo04141 Protein processing in endoplasmic reticulum 2
ppo01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 4
mtr04120 Ubiquitin mediated proteolysis 3
mtr03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 6
ghi04070 Phosphatidylinositol signaling system 6
ghi04075 Plant hormone signal transduction 6
ghi04626 Plant-pathogen interaction 6
ghi03013 Nucleocytoplasmic transport 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 6
ghi04070 Phosphatidylinositol signaling system 6
ghi04075 Plant hormone signal transduction 6
ghi04626 Plant-pathogen interaction 6
ghi03013 Nucleocytoplasmic transport 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00010 Glycolysis / Gluconeogenesis 2
bna00020 Citrate cycle (TCA cycle) 2
bna00620 Pyruvate metabolism 2
bna00785 Lipoic acid metabolism 2
bna01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00010 Glycolysis / Gluconeogenesis 2
bna00020 Citrate cycle (TCA cycle) 2
bna00620 Pyruvate metabolism 2
bna00785 Lipoic acid metabolism 2
bna01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00010 Glycolysis / Gluconeogenesis 4
bna00020 Citrate cycle (TCA cycle) 4
bna00620 Pyruvate metabolism 4
bna00785 Lipoic acid metabolism 4
bna01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00520 Amino sugar and nucleotide sugar metabolism 2
cit01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00190 Oxidative phosphorylation 6
osa00020 Citrate cycle (TCA cycle) 5
osa01200 Carbon metabolism 5
osa04145 Phagosome 4
osa04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00190 Oxidative phosphorylation 5
zma04145 Phagosome 5
zma04144 Endocytosis 4
zma04142 Lysosome 4
zma04517 IgSF CAM signaling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 3
tae03013 Nucleocytoplasmic transport 3
tae04141 Protein processing in endoplasmic reticulum 3
tae00520 Amino sugar and nucleotide sugar metabolism 2
tae01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 3
tae03013 Nucleocytoplasmic transport 3
tae04141 Protein processing in endoplasmic reticulum 3
tae00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00260 Glycine, serine and threonine metabolism 2
sbi00310 Lysine degradation 2
sbi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101258829 101260160 102588697 107760858 107830885 107825011 819011 100802292 100806300 100800203 103858115 103866119 100266227 7465602 25488885 11421452 107942991 107939681 106429285 111215185 106438206 102624690 4334748 100191638 100383741 123087672 123114265 123123751 123395040 110431230 8084600 100833662
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