ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sly-u.5	101259189	uncharacterized LOC101259189
sly-r.6	101259189	uncharacterized LOC101259189
sly-u.5	101245646	uncharacterized LOC101245646
sly-u.5	101266760	uncharacterized LOC101266760
sot-r.1	102598422	uncharacterized LOC102598422
sot-r.1	102603879	uncharacterized LOC102603879
sot-r.1	102578673	uncharacterized LOC102578673
nta-r.1	107821786	uncharacterized LOC107821786
nta-r.1	107831104	uncharacterized LOC107831104
nta-r.1	107812639	uncharacterized LOC107812639
ath-u.5	AT4G16146	cAMP-regulated phosphoprotein 19-related protein
ath-u.5	AT5G64130	cAMP-regulated phosphoprotein 19-related protein
ath-u.5	AT1G69510	cAMP-regulated phosphoprotein 19-related protein
gma-u.5	100817767	uncharacterized LOC100817767
gma-u.5	100801094	uncharacterized LOC100801094
gma-u.5	100779452	uncharacterized LOC100779452
bra-r.6	103855229	uncharacterized LOC103855229
bra-r.6	103831346	uncharacterized LOC103831346
vvi-u.5	100262011	uncharacterized LOC100262011
vvi-u.5	100255126	uncharacterized LOC100255126
vvi-u.5	100241624	uncharacterized LOC100241624
ppo-u.5	7481577	uncharacterized LOC7481577
ppo-u.5	7482261	uncharacterized LOC7482261
ppo-u.5	18107375	uncharacterized LOC18107375
mtr-u.5	11421947	uncharacterized LOC11421947
mtr-u.5	11417585	uncharacterized LOC11417585
ghi-r.1	107918493	uncharacterized LOC107918493
ghi-r.1	107893992	uncharacterized LOC107893992
ghi-r.1	107895974	uncharacterized LOC107895974
bna-r.1	106404924	uncharacterized LOC106404924
bna-r.1	106347847	uncharacterized LOC106347847
bna-r.1	111209128	uncharacterized LOC111209128
cit-r.1	102627496	hypothetical protein
cit-r.1	102608639	hypothetical protein
cit-r.1	102616309	ribosome biogenesis protein erb1
osa-u.5	4323909	uncharacterized LOC4323909
osa-u.5	4339635	uncharacterized LOC4339635
osa-u.5	4332591	uncharacterized LOC4332591
zma-u.5	100217147	uncharacterized LOC100217147
zma-u.5	100281935	negatively light-regulated protein
zma-u.5	100282125	uncharacterized LOC100282125
tae-r.2	123069503	uncharacterized LOC123069503
tae-r.2	123051459	uncharacterized LOC123051459
tae-r.2	123043591	uncharacterized LOC123043591
hvu-r.1	123448841	uncharacterized LOC123448841
hvu-r.1	123443348	uncharacterized LOC123443348
hvu-r.1	123424640	uncharacterized LOC123424640
sbi-r.1	8077541	uncharacterized LOC8077541
sbi-r.1	8083999	uncharacterized LOC8083999
sbi-r.1	8077512	uncharacterized LOC8077512
bdi-r.1	100843260	uncharacterized LOC100843260
bdi-r.1	100837301	uncharacterized LOC100837301
bdi-r.1	100833173	uncharacterized LOC100833173
cre-r.1	CHLRE_06g307200v5	uncharacterized protein

Top 50 coexpressed genes to 101259189 (sly-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 101259189 (sly-u.5 coexpression data)

CoexMap"101259189"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_004228998.1 [sequence] [blastp]
XP_010318869.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 9, mito 1	(predict for XP_004228998.1)
nucl 9, mito 1	(predict for XP_010318869.1)

Subcellular
localization
TargetP

other 8	(predict for XP_004228998.1)
other 8	(predict for XP_010318869.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sly-u.5 for 101259189	sly-r.6 for 101259189	sly-u.5 for 101245646	sly-u.5 for 101266760	sot-r.1 for 102598422	sot-r.1 for 102603879	sot-r.1 for 102578673	nta-r.1 for 107821786	nta-r.1 for 107831104	nta-r.1 for 107812639	ath-u.5 for AT4G16146	ath-u.5 for AT5G64130	ath-u.5 for AT1G69510	gma-u.5 for 100817767	gma-u.5 for 100801094	gma-u.5 for 100779452	bra-r.6 for 103855229	bra-r.6 for 103831346	vvi-u.5 for 100262011	vvi-u.5 for 100255126	vvi-u.5 for 100241624	ppo-u.5 for 7481577	ppo-u.5 for 7482261	ppo-u.5 for 18107375	mtr-u.5 for 11421947	mtr-u.5 for 11417585	ghi-r.1 for 107918493	ghi-r.1 for 107893992	ghi-r.1 for 107895974	bna-r.1 for 106404924	bna-r.1 for 106347847	bna-r.1 for 111209128	cit-r.1 for 102627496	cit-r.1 for 102608639	cit-r.1 for 102616309	osa-u.5 for 4323909	osa-u.5 for 4339635	osa-u.5 for 4332591	zma-u.5 for 100217147	zma-u.5 for 100281935	zma-u.5 for 100282125	tae-r.2 for 123069503	tae-r.2 for 123051459	tae-r.2 for 123043591	hvu-r.1 for 123448841	hvu-r.1 for 123443348	hvu-r.1 for 123424640	sbi-r.1 for 8077541	sbi-r.1 for 8083999	sbi-r.1 for 8077512	bdi-r.1 for 100843260	bdi-r.1 for 100837301	bdi-r.1 for 100833173	cre-r.1 for CHLRE_06g307200v5

Ortholog

Ortholog ID: 727

Species

sly

sot

nta

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

uncharacterized LOC101259189

uncharacterized LOC101245646

uncharacterized LOC101266760

uncharacterized LOC102598422

uncharacterized LOC102603879

uncharacterized LOC107831104

uncharacterized LOC107812639

uncharacterized LOC107806809

cAMP-regulated phosphoprotein 19-related protein

uncharacterized LOC100817767

uncharacterized LOC100801094

uncharacterized LOC103831346

uncharacterized LOC103873832

uncharacterized LOC100262011

uncharacterized LOC100255126

uncharacterized LOC100241624

uncharacterized LOC7481577

uncharacterized LOC7482261

uncharacterized LOC18101480

uncharacterized LOC11417585

uncharacterized LOC11413920

uncharacterized LOC107948607

uncharacterized LOC121221175

uncharacterized LOC106351919

hypothetical protein

ribosome biogenesis protein erb1

uncharacterized LOC4323909

uncharacterized LOC4332591

uncharacterized LOC4327220

uncharacterized LOC100282125

uncharacterized LOC100192824

uncharacterized LOC100192001

uncharacterized LOC123043591

wiskott-Aldrich syndrome protein family member 2

uncharacterized LOC123184672

uncharacterized LOC123448841

uncharacterized LOC123424640

uncharacterized LOC123450668

uncharacterized LOC8083999

uncharacterized LOC8077512

uncharacterized LOC8069725

uncharacterized LOC100837301

uncharacterized LOC100833173

uncharacterized LOC100844440

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00190	Oxidative phosphorylation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04120	Ubiquitin mediated proteolysis	5
sly03010	Ribosome	4
sly04141	Protein processing in endoplasmic reticulum	3
sly03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04144	Endocytosis	2
nta00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04144	Endocytosis	4
nta04120	Ubiquitin mediated proteolysis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00196	Photosynthesis - antenna proteins	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04712	Circadian rhythm - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00190	Oxidative phosphorylation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00190	Oxidative phosphorylation	8
gma04145	Phagosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04144	Endocytosis	3
gma04145	Phagosome	3
gma00190	Oxidative phosphorylation	2
gma04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00190	Oxidative phosphorylation	4
bra04145	Phagosome	3
bra04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00190	Oxidative phosphorylation	6
vvi03010	Ribosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04626	Plant-pathogen interaction	2
ppo03015	mRNA surveillance pathway	2
ppo04136	Autophagy - other	2
ppo04382	Cornified envelope formation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00040	Pentose and glucuronate interconversions	3
ppo00053	Ascorbate and aldarate metabolism	3
ppo00520	Amino sugar and nucleotide sugar metabolism	3
ppo00541	Biosynthesis of various nucleotide sugars	3
ppo01240	Biosynthesis of cofactors	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04142	Lysosome	2
mtr00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	6
ghi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	6
ghi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00190	Oxidative phosphorylation	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00190	Oxidative phosphorylation	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04075	Plant hormone signal transduction	4
osa04016	MAPK signaling pathway - plant	2
osa04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00190	Oxidative phosphorylation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03050	Proteasome	13

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00190	Oxidative phosphorylation	9
zma00020	Citrate cycle (TCA cycle)	2
zma01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04141	Protein processing in endoplasmic reticulum	4
tae03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03050	Proteasome	6
hvu04141	Protein processing in endoplasmic reticulum	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi01200	Carbon metabolism	5
sbi00010	Glycolysis / Gluconeogenesis	4
sbi01230	Biosynthesis of amino acids	4
sbi04120	Ubiquitin mediated proteolysis	3
sbi04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00480	Glutathione metabolism	5
sbi00190	Oxidative phosphorylation	3
sbi04145	Phagosome	3
sbi00061	Fatty acid biosynthesis	2
sbi00071	Fatty acid degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00190	Oxidative phosphorylation	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00480	Glutathione metabolism	2
bdi00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00190	Oxidative phosphorylation	4
cre04144	Endocytosis	3
cre03040	Spliceosome	2
cre04145	Phagosome	2
cre04148	Efferocytosis	2

Expression

Expression pattern

Entrez Gene ID^*

101259189

101245646

101266760

102598422

102603879

107831104

107812639

107806809

827304

836534

843284

100817767

100801094

103831346

103873832

100262011

100255126

100241624

7481577

7482261

18101480

11417585

11413920

107948607

121221175

106351919

102627496

102608639

102616309

4323909

4332591

4327220

100282125

100192824

100192001

123043591

123183157

123184672

123448841

123424640

123450668

8083999

8077512

8069725

100837301

100833173

100844440

5716863

The preparation time of this page was 0.2 [sec].


Species	sly	sot	nta	ath	gma	bra	vvi	ppo	mtr	ghi	bna	cit	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	3	3	3	3	2	3	3	2	3	3	3	3	3	3	3	3	3	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 101259189 (sly-u.5 coexpression data)

Top 50 enrichment test to 101259189 (sly-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**