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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101259489   chloride channel protein CLC-e 
 sly-r.6   101259489   chloride channel protein CLC-e 
 sly-u.5   101252124   chloride channel protein CLC-f-like 
 sly-u.5   606305   putative chloride channel protein 
 ath-u.5   CLC-E   chloride channel E 
 ath-u.5   CLC-F   chloride channel F 
 gma-u.5   100777943   chloride channel protein CLC-f 
 gma-u.5   100812959   chloride channel protein CLC-e 
 gma-u.5   100796023   chloride channel protein CLC-f 
 vvi-u.5   100266917   chloride channel ClC2 
 vvi-u.5   100253731   chloride channel ClC7 
 ppo-u.5   18098186   chloride channel protein CLC-e 
 ppo-u.5   7471717   chloride channel protein CLC-f 
 mtr-u.5   25488515   chloride channel protein CLC-f 
 mtr-u.5   11425304   chloride channel protein CLC-e 
 osa-u.5   4345939   chloride channel protein CLC-f 
 osa-u.5   4330553   chloride channel protein CLC-f 
 osa-u.5   9267257   chloride channel protein CLC-e 
 zma-u.5   103627661   chloride channel protein CLC-f 
 zma-u.5   103651283   chloride channel protein CLC-e 
 zma-u.5   100275204   uncharacterized LOC100275204 

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Top 50 coexpressed genes to 101259489 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101259489 (sly-u.5 coexpression data)

CoexMap"101259489"


slyLOC101259489 | Entrez gene ID : 101259489    
Species sly ath gma vvi ppo mtr osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 2 3 2 2 2 3 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006821 [list] [network] chloride transport  (13 genes)  IEA  
GO:0055085 [list] [network] transmembrane transport  (966 genes)  IEA  
GO CC
GO:0009535 [list] [network] chloroplast thylakoid membrane  (117 genes)  IEA  
GO MF
GO:0005247 [list] [network] voltage-gated chloride channel activity  (10 genes)  IEA  
Protein XP_004231107.2 [sequence] [blastp]
XP_019067498.1 [sequence] [blastp]
XP_019067499.1 [sequence] [blastp]
XP_025884684.1 [sequence] [blastp]
XP_025884685.1 [sequence] [blastp]
XP_069147032.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_004231107.2)
chlo 9  (predict for XP_019067498.1)
chlo 9  (predict for XP_019067499.1)
chlo 9  (predict for XP_025884684.1)
chlo 9  (predict for XP_025884685.1)
chlo 9  (predict for XP_069147032.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_004231107.2)
chlo 9  (predict for XP_019067498.1)
chlo 9  (predict for XP_019067499.1)
chlo 9  (predict for XP_025884684.1)
chlo 9  (predict for XP_025884685.1)
chlo 9  (predict for XP_069147032.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101259489

.
sly-r.6
for
101259489

.
sly-u.5
for
101252124

.
sly-u.5
for
606305

.
ath-u.5
for
CLC-E

.
ath-u.5
for
CLC-F

.
gma-u.5
for
100777943

.
gma-u.5
for
100812959

.
gma-u.5
for
100796023

.
vvi-u.5
for
100266917

.
vvi-u.5
for
100253731

.
ppo-u.5
for
18098186

.
ppo-u.5
for
7471717

.
mtr-u.5
for
25488515

.
mtr-u.5
for
11425304

.
osa-u.5
for
4345939

.
osa-u.5
for
4330553

.
osa-u.5
for
9267257

.
zma-u.5
for
103627661

.
zma-u.5
for
103651283

.
zma-u.5
for
100275204

.


Ortholog ID: 2042
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit cit bdi bdi nta nta
Symbol CLC-E CLC-F LOC100796023 LOC100812959 LOC101252124 LOC606305 LOC4330553 LOC9267257 LOC100275204 LOC103627661 LOC103871031 LOC103828107 LOC100253731 LOC100266917 LOC18098186 LOC7471717 LOC11425304 LOC25488515 LOC123061768 LOC123145318 LOC123402245 LOC123407624 LOC107951362 LOC121209362 LOC106396427 LOC106345777 CHLRE_01g037150v5 LOC8071767 LOC8069763 LOC102592091 LOC102591882 LOC102620991 LOC102620548 LOC100833796 LOC100833604 LOC107770372 LOC107760449
Function* chloride channel E chloride channel F chloride channel protein CLC-f chloride channel protein CLC-e chloride channel protein CLC-f-like putative chloride channel protein chloride channel protein CLC-f chloride channel protein CLC-e uncharacterized LOC100275204 chloride channel protein CLC-f chloride channel protein CLC-f chloride channel protein CLC-e chloride channel ClC7 chloride channel ClC2 chloride channel protein CLC-e chloride channel protein CLC-f chloride channel protein CLC-e chloride channel protein CLC-f chloride channel protein CLC-e chloride channel protein CLC-f chloride channel protein CLC-f-like chloride channel protein CLC-f chloride channel protein CLC-f chloride channel protein CLC-f chloride channel protein CLC-f chloride channel protein CLC-f uncharacterized protein chloride channel protein CLC-f chloride channel protein CLC-e chloride channel protein CLC-e chloride channel protein CLC-f-like chloride channel protein CLC-e chloride channel protein CLC-f chloride channel protein CLC-f chloride channel protein CLC-f chloride channel protein CLC-f chloride channel protein CLC-f
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00520 Amino sugar and nucleotide sugar metabolism 2
ath01250 Biosynthesis of nucleotide sugars 2
ath00230 Purine metabolism 2
ath00240 Pyrimidine metabolism 2
ath01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00520 Amino sugar and nucleotide sugar metabolism 4
osa01240 Biosynthesis of cofactors 4
osa01250 Biosynthesis of nucleotide sugars 4
osa00240 Pyrimidine metabolism 3
osa01232 Nucleotide metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00520 Amino sugar and nucleotide sugar metabolism 4
bra04144 Endocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00260 Glycine, serine and threonine metabolism 2
vvi00630 Glyoxylate and dicarboxylate metabolism 2
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00730 Thiamine metabolism 2
ppo01240 Biosynthesis of cofactors 2
ppo00640 Propanoate metabolism 2
ppo01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03083 Polycomb repressive complex 2
ppo00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
ppo03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 3
hvu00520 Amino sugar and nucleotide sugar metabolism 3
hvu04144 Endocytosis 2
hvu01250 Biosynthesis of nucleotide sugars 2
hvu04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00230 Purine metabolism 2
ghi04075 Plant hormone signal transduction 2
ghi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00230 Purine metabolism 2
ghi04075 Plant hormone signal transduction 2
ghi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 4
sot00510 N-Glycan biosynthesis 3
sot00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00562 Inositol phosphate metabolism 2
nta04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00562 Inositol phosphate metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 829696 842011 100796023 100812959 101252124 606305 4330553 9267257 100275204 103627661 103871031 103828107 100253731 100266917 18098186 7471717 11425304 25488515 123061768 123145318 123402245 123407624 107951362 121209362 106396427 106345777 5715492 8071767 8069763 102592091 102591882 102620991 102620548 100833796 100833604 107770372 107760449
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