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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101259722   probable DEAD-box ATP-dependent RNA helicase 48 
 sly-r.6   101259722   probable DEAD-box ATP-dependent RNA helicase 48 
 ath-u.5   AT1G63250   DEA(D/H)-box RNA helicase family protein 
 gma-u.5   100808520   probable DEAD-box ATP-dependent RNA helicase 48 
 gma-u.5   100781898   probable DEAD-box ATP-dependent RNA helicase 48 
 vvi-u.5   100254793   probable DEAD-box ATP-dependent RNA helicase 48 
 ppo-u.5   7478057   probable DEAD-box ATP-dependent RNA helicase 48 
 ppo-u.5   7458158   probable DEAD-box ATP-dependent RNA helicase 48 
 mtr-u.5   25502029   probable DEAD-box ATP-dependent RNA helicase 48 
 osa-u.5   4331214   DEAD-box ATP-dependent RNA helicase 48-like 
 zma-u.5   103627905   DEAD-box ATP-dependent RNA helicase 48 

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Top 50 coexpressed genes to 101259722 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101259722 (sly-u.5 coexpression data)

CoexMap"101259722"


slyLOC101259722 | Entrez gene ID : 101259722      
Species sly ath gma vvi ppo mtr osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 2 1 2 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003724 [list] [network] RNA helicase activity  (68 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (1916 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (4457 genes)  IEA  
Protein XP_004252645.4 [sequence] [blastp]
Subcellular
localization
wolf
chlo 3,  mito 2,  plas 1,  E.R. 1,  E.R._plas 1,  nucl 1,  cyto_mito 1,  cysk_nucl 1,  E.R._vacu 1  (predict for XP_004252645.4)
Subcellular
localization
TargetP
other 6  (predict for XP_004252645.4)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101259722

.
sly-r.6
for
101259722

.
ath-u.5
for
AT1G63250

.
gma-u.5
for
100808520

.
gma-u.5
for
100781898

.
vvi-u.5
for
100254793

.
ppo-u.5
for
7478057

.
ppo-u.5
for
7458158

.
mtr-u.5
for
25502029

.
osa-u.5
for
4331214

.
zma-u.5
for
103627905

.


Ortholog ID: 9382
Species ath gma gma sly osa zma bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol AT1G63250 LOC100808520 LOC100781898 LOC101259722 LOC4331214 LOC103627905 LOC103838078 LOC100254793 LOC7478057 LOC7458158 LOC25502029 LOC123129118 LOC123146284 LOC123406320 LOC107947009 LOC107936423 LOC106358552 LOC106366519 LOC8084443 LOC102602129 LOC102624311 LOC100821408 LOC107774058 LOC107790752
Function* DEA(D/H)-box RNA helicase family protein probable DEAD-box ATP-dependent RNA helicase 48 probable DEAD-box ATP-dependent RNA helicase 48 probable DEAD-box ATP-dependent RNA helicase 48 DEAD-box ATP-dependent RNA helicase 48-like DEAD-box ATP-dependent RNA helicase 48 probable DEAD-box ATP-dependent RNA helicase 48 probable DEAD-box ATP-dependent RNA helicase 48 probable DEAD-box ATP-dependent RNA helicase 48 probable DEAD-box ATP-dependent RNA helicase 48 probable DEAD-box ATP-dependent RNA helicase 48 DEAD-box ATP-dependent RNA helicase 48 DEAD-box ATP-dependent RNA helicase 48 DEAD-box ATP-dependent RNA helicase 48-like probable DEAD-box ATP-dependent RNA helicase 48 probable DEAD-box ATP-dependent RNA helicase 48 probable DEAD-box ATP-dependent RNA helicase 48 probable DEAD-box ATP-dependent RNA helicase 48 DEAD-box ATP-dependent RNA helicase 48 probable DEAD-box ATP-dependent RNA helicase 48 probable DEAD-box ATP-dependent RNA helicase 48 DEAD-box ATP-dependent RNA helicase 48 putative DEAD-box ATP-dependent RNA helicase 48 putative DEAD-box ATP-dependent RNA helicase 48
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 2
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 2
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00020 Citrate cycle (TCA cycle) 2
tae00630 Glyoxylate and dicarboxylate metabolism 2
tae01200 Carbon metabolism 2
tae01210 2-Oxocarboxylic acid metabolism 2
tae01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 4
bna03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 3
sbi00510 N-Glycan biosynthesis 2
sbi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03020 RNA polymerase 3
sot03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 3
bdi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 842631 100808520 100781898 101259722 4331214 103627905 103838078 100254793 7478057 7458158 25502029 123129118 123146284 123406320 107947009 107936423 106358552 106366519 8084443 102602129 102624311 100821408 107774058 107790752
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