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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101259854   protein TIFY 4B 
 sly-r.6   101259854   protein TIFY 4B 
 sly-u.5   101265858   protein TIFY 4B 
 sot-r.1   102599493   protein TIFY 4B-like 
 sot-r.1   102592139   protein TIFY 4B-like 
 nta-r.1   107830745   protein TIFY 4B 
 nta-r.1   107785869   protein TIFY 4B 
 nta-r.1   107767577   protein TIFY 4B 
 ath-u.5   PPD1   TIFY domain/Divergent CCT motif family protein 
 ath-u.5   AT4G14720   TIFY domain/Divergent CCT motif family protein 
 gma-u.5   100813937   protein TIFY 4B 
 gma-u.5   100808970   protein TIFY 4B 
 bra-r.6   103871821   protein TIFY 4B 
 bra-r.6   103833464   protein TIFY 4B 
 vvi-u.5   100246035   protein TIFY 4B 
 vvi-u.5   100242586   protein TIFY 4B 
 ppo-u.5   7480273   protein TIFY 4B 
 ppo-u.5   7480677   protein TIFY 4B 
 mtr-u.5   25485144   protein TIFY 4B 
 ghi-r.1   107914893   protein TIFY 4B 
 ghi-r.1   107916329   protein TIFY 4B 
 ghi-r.1   107930689   protein TIFY 4B 
 bna-r.1   106412303   protein TIFY 4B 
 bna-r.1   111202327   protein TIFY 4B-like 
 bna-r.1   106360609   protein TIFY 4B 
 cit-r.1   102623980   protein TIFY 4B 
 cit-r.1   102623067   protein TIFY 4B 

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Top 50 coexpressed genes to 101259854 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101259854 (sly-u.5 coexpression data)

CoexMap"101259854"


slyLOC101259854 | Entrez gene ID : 101259854      
Species sly sot nta ath gma bra vvi ppo mtr ghi bna cit zma cre sbi tae osa hvu bdi
Paralog 3 2 3 2 2 2 2 2 1 3 3 2 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:2000022 [list] [network] regulation of jasmonic acid mediated signaling pathway  (19 genes)  IEA  
GO:0031347 [list] [network] regulation of defense response  (27 genes)  IEA  
GO:0009611 [list] [network] response to wounding  (33 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2947 genes)  IEA  
GO MF
Protein XP_010323052.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_010323052.1)
Subcellular
localization
TargetP
other 9  (predict for XP_010323052.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101259854
sly-r.6
for
101259854
sly-u.5
for
101265858
sot-r.1
for
102599493
sot-r.1
for
102592139
nta-r.1
for
107830745
nta-r.1
for
107785869
nta-r.1
for
107767577
ath-u.5
for
PPD1
ath-u.5
for
AT4G14720
gma-u.5
for
100813937
gma-u.5
for
100808970
bra-r.6
for
103871821
bra-r.6
for
103833464
vvi-u.5
for
100246035
vvi-u.5
for
100242586
ppo-u.5
for
7480273
ppo-u.5
for
7480677
mtr-u.5
for
25485144
ghi-r.1
for
107914893
ghi-r.1
for
107916329
ghi-r.1
for
107930689
bna-r.1
for
106412303
bna-r.1
for
111202327
bna-r.1
for
106360609
cit-r.1
for
102623980
cit-r.1
for
102623067


Ortholog ID: 7273
Species sly sly sot sot nta nta nta ath ath gma gma bra bra vvi vvi ppo ppo mtr ghi ghi ghi bna bna bna cit cit
Symbol LOC101259854 LOC101265858 LOC102599493 LOC102592139 LOC107785869 LOC107767577 LOC107761032 PPD1 AT4G14720 LOC100813937 LOC100808970 LOC103871821 LOC103833464 LOC100246035 LOC100242586 LOC7480273 LOC7480677 LOC25485144 LOC107916329 LOC107930689 LOC107897684 LOC106412303 LOC111202327 LOC106360609 LOC102623980 LOC102623067
Function* protein TIFY 4B protein TIFY 4B protein TIFY 4B-like protein TIFY 4B-like protein TIFY 4B protein TIFY 4B protein TIFY 4B TIFY domain/Divergent CCT motif family protein TIFY domain/Divergent CCT motif family protein protein TIFY 4B protein TIFY 4B protein TIFY 4B protein TIFY 4B protein TIFY 4B protein TIFY 4B protein TIFY 4B protein TIFY 4B protein TIFY 4B protein TIFY 4B protein TIFY 4B protein TIFY 4B protein TIFY 4B protein TIFY 4B-like protein TIFY 4B protein TIFY 4B protein TIFY 4B
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00564 Glycerophospholipid metabolism 2
sot00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
nta00010 Glycolysis / Gluconeogenesis 2
nta00071 Fatty acid degradation 2
nta00350 Tyrosine metabolism 2
nta00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 2
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00941 Flavonoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
ghi00999 Biosynthesis of various plant secondary metabolites 2
ghi01230 Biosynthesis of amino acids 2
ghi03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00280 Valine, leucine and isoleucine degradation 2
ghi00410 beta-Alanine metabolism 2
ghi00562 Inositol phosphate metabolism 2
ghi00640 Propanoate metabolism 2
ghi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
ghi00999 Biosynthesis of various plant secondary metabolites 2
ghi01230 Biosynthesis of amino acids 2
ghi03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03020 RNA polymerase 3
bna03420 Nucleotide excision repair 3
bna03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04130 SNARE interactions in vesicular transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03020 RNA polymerase 3
bna03420 Nucleotide excision repair 3
bna03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04712 Circadian rhythm - plant 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101259854 101265858 102599493 102592139 107785869 107767577 107761032 827123 827125 100813937 100808970 103871821 103833464 100246035 100242586 7480273 7480677 25485144 107916329 107930689 107897684 106412303 111202327 106360609 102623980 102623067
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