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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101260365   uncharacterized LOC101260365 
 sly-r.6   101260365   uncharacterized LOC101260365 
 ath-u.5   AT5G25754   RNA polymerase I-associated factor PAF67 
 ath-u.5   AT5G25757   RNA polymerase I-associated factor PAF67 
 gma-u.5   100804691   eukaryotic translation initiation factor 3 subunit L 
 gma-u.5   100786533   eukaryotic translation initiation factor 3 subunit L 
 vvi-u.5   100261248   uncharacterized LOC100261248 
 ppo-u.5   7471539   uncharacterized LOC7471539 
 ppo-u.5   7458974   uncharacterized LOC7458974 
 mtr-u.5   25490098   eukaryotic translation initiation factor 3 subunit L 
 osa-u.5   4327193   uncharacterized LOC4327193 
 osa-u.5   4338152   uncharacterized LOC4338152 
 zma-u.5   100279318   eukaryotic translation initiation factor 3 subunit 6-interacting protein 
 zma-u.5   103649546   eukaryotic translation initiation factor 3 subunit L-like 

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Top 50 coexpressed genes to 101260365 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101260365 (sly-u.5 coexpression data)

CoexMap"101260365"


slyLOC101260365 | Entrez gene ID : 101260365      
Species sly ath gma vvi ppo mtr osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 2 2 2 1 2 1 2 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006413 [list] [network] translational initiation  (54 genes)  IEA  
GO CC
GO:0005852 [list] [network] eukaryotic translation initiation factor 3 complex  (19 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (5127 genes)  IEA  
GO MF
GO:0003743 [list] [network] translation initiation factor activity  (64 genes)  IEA  
Protein XP_004245267.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 7,  nucl 2  (predict for XP_004245267.1)
Subcellular
localization
TargetP
other 9  (predict for XP_004245267.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101260365

.
sly-r.6
for
101260365

.
ath-u.5
for
AT5G25754

.
ath-u.5
for
AT5G25757

.
gma-u.5
for
100804691

.
gma-u.5
for
100786533

.
vvi-u.5
for
100261248

.
ppo-u.5
for
7471539

.
ppo-u.5
for
7458974

.
mtr-u.5
for
25490098

.
osa-u.5
for
4327193

.
osa-u.5
for
4338152

.
zma-u.5
for
100279318

.
zma-u.5
for
103649546

.


Ortholog ID: 7354
Species ath ath gma gma sly osa osa zma zma vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT5G25754 AT5G25757 LOC100804691 LOC100786533 LOC101260365 LOC4327193 LOC4338152 LOC103649546 LOC100279318 LOC100261248 LOC7458974 LOC7471539 LOC25490098 LOC123060790 LOC123069353 LOC123443248 LOC107896412 LOC107901567 LOC106348547 LOC106348766 CHLRE_17g697450v5 LOC8080370 LOC102589649 LOC102620355 LOC100821595 LOC107773770 LOC107766223
Function* RNA polymerase I-associated factor PAF67 RNA polymerase I-associated factor PAF67 eukaryotic translation initiation factor 3 subunit L eukaryotic translation initiation factor 3 subunit L uncharacterized LOC101260365 uncharacterized LOC4327193 uncharacterized LOC4338152 eukaryotic translation initiation factor 3 subunit L-like eukaryotic translation initiation factor 3 subunit 6-interacting protein uncharacterized LOC100261248 uncharacterized LOC7458974 uncharacterized LOC7471539 eukaryotic translation initiation factor 3 subunit L eukaryotic translation initiation factor 3 subunit L eukaryotic translation initiation factor 3 subunit L eukaryotic translation initiation factor 3 subunit L-like eukaryotic translation initiation factor 3 subunit L eukaryotic translation initiation factor 3 subunit L eukaryotic translation initiation factor 3 subunit L-like eukaryotic translation initiation factor 3 subunit L-like uncharacterized protein eukaryotic translation initiation factor 3 subunit L eukaryotic translation initiation factor 3 subunit L-like uncharacterized LOC102620355 eukaryotic translation initiation factor 3 subunit L uncharacterized LOC107773770 uncharacterized LOC107766223
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 5
sly03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 3
zma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 3
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 2
vvi00020 Citrate cycle (TCA cycle) 2
vvi00785 Lipoic acid metabolism 2
vvi01200 Carbon metabolism 2
vvi01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 8
ppo00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 11
mtr00970 Aminoacyl-tRNA biosynthesis 2
mtr00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03022 Basal transcription factors 2
tae03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 3
hvu00970 Aminoacyl-tRNA biosynthesis 2
hvu03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 2
ghi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 2
ghi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 3
bna00220 Arginine biosynthesis 2
bna00240 Pyrimidine metabolism 2
bna00250 Alanine, aspartate and glutamate metabolism 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 3
bna00220 Arginine biosynthesis 2
bna00240 Pyrimidine metabolism 2
bna00250 Alanine, aspartate and glutamate metabolism 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 15
sot03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00510 N-Glycan biosynthesis 3
cit04141 Protein processing in endoplasmic reticulum 3
cit03010 Ribosome 3
cit00290 Valine, leucine and isoleucine biosynthesis 2
cit00770 Pantothenate and CoA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 6
nta00970 Aminoacyl-tRNA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 832643 832644 100804691 100786533 101260365 4327193 4338152 103649546 100279318 100261248 7458974 7471539 25490098 123060790 123069353 123443248 107896412 107901567 106348547 106348766 5717366 8080370 102589649 102620355 100821595 107773770 107766223
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