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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101260578   uroporphyrinogen decarboxylase 1, chloroplastic 
 sly-r.6   101260578   uroporphyrinogen decarboxylase 1, chloroplastic 
 sly-m.5   101260578   uroporphyrinogen decarboxylase 1, chloroplastic 
 sot-r.1   102584336   uroporphyrinogen decarboxylase 1, chloroplastic 
 nta-r.1   107765624   uroporphyrinogen decarboxylase 1, chloroplastic 
 ath-u.5   HEME1   Uroporphyrinogen decarboxylase 
 gma-u.5   100807032   uroporphyrinogen decarboxylase 1, chloroplastic 
 gma-u.5   100803496   uroporphyrinogen decarboxylase 1, chloroplastic 
 bra-r.6   103869973   uroporphyrinogen decarboxylase 1, chloroplastic 
 vvi-u.5   100252130   uroporphyrinogen decarboxylase 1, chloroplastic 
 ppo-u.5   18095486   uroporphyrinogen decarboxylase 1, chloroplastic 
 mtr-u.5   11416440   uroporphyrinogen decarboxylase 1, chloroplastic 
 ghi-r.1   107918050   uroporphyrinogen decarboxylase 1, chloroplastic 
 ghi-r.1   107898607   uroporphyrinogen decarboxylase 1, chloroplastic 
 ghi-r.1   107897251   uroporphyrinogen decarboxylase 1, chloroplastic 
 bna-r.1   106423544   uroporphyrinogen decarboxylase 1, chloroplastic 
 bna-r.1   106401372   uroporphyrinogen decarboxylase 1, chloroplastic 
 cit-r.1   102620910   uroporphyrinogen decarboxylase 1, chloroplastic 
 osa-u.5   4326635   uroporphyrinogen decarboxylase 1, chloroplastic-like 
 zma-u.5   118473148   uroporphyrinogen decarboxylase 1, chloroplastic 
 zma-u.5   118473149   uroporphyrinogen decarboxylase 1, chloroplastic 
 zma-u.5   100383208   uncharacterized LOC100383208 
 tae-r.2   123061522   uroporphyrinogen decarboxylase 1, chloroplastic 
 tae-r.2   123070166   uroporphyrinogen decarboxylase 1, chloroplastic 
 tae-r.2   123078601   uroporphyrinogen decarboxylase 1, chloroplastic 
 hvu-r.1   123443911   uroporphyrinogen decarboxylase 1, chloroplastic 
 sbi-r.1   8054902   uroporphyrinogen decarboxylase 1, chloroplastic 
 bdi-r.1   100835226   uroporphyrinogen decarboxylase 1, chloroplastic 
 cre-r.1   CHLRE_02g076300v5   uncharacterized protein 
 cre-r.1   CHLRE_02g073700v5   uncharacterized protein 

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Top 50 coexpressed genes to 101260578 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101260578 (sly-u.5 coexpression data)

CoexMap"101260578"


slyLOC101260578 | Entrez gene ID : 101260578      
Species sly sot nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 3 1 1 1 2 1 1 1 1 3 2 1 1 3 3 1 1 1 2
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly00860 [list] [network] Porphyrin metabolism (52 genes)
sly01240 [list] [network] Biosynthesis of cofactors (247 genes)
GO BP
GO:0006779 [list] [network] porphyrin-containing compound biosynthetic process  (26 genes)  IEA  
GO CC
GO MF
GO:0004853 [list] [network] uroporphyrinogen decarboxylase activity  (2 genes)  IEA  
Protein XP_010327114.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for XP_010327114.1)
Subcellular
localization
TargetP
chlo 5  (predict for XP_010327114.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101260578
sly-r.6
for
101260578
sly-m.5
for
101260578
sot-r.1
for
102584336
nta-r.1
for
107765624
ath-u.5
for
HEME1
gma-u.5
for
100807032
gma-u.5
for
100803496
bra-r.6
for
103869973
vvi-u.5
for
100252130
ppo-u.5
for
18095486
mtr-u.5
for
11416440
ghi-r.1
for
107918050
ghi-r.1
for
107898607
ghi-r.1
for
107897251
bna-r.1
for
106423544
bna-r.1
for
106401372
cit-r.1
for
102620910
osa-u.5
for
4326635
zma-u.5
for
118473148
zma-u.5
for
118473149
zma-u.5
for
100383208
tae-r.2
for
123061522
tae-r.2
for
123070166
tae-r.2
for
123078601
hvu-r.1
for
123443911
sbi-r.1
for
8054902
bdi-r.1
for
100835226
cre-r.1
for
CHLRE_02g076300v5
cre-r.1
for
CHLRE_02g073700v5


Ortholog ID: 8003
Species sly sot nta ath gma gma bra vvi ppo mtr ghi ghi ghi bna bna cit osa zma zma zma tae tae tae hvu sbi bdi cre cre
Symbol LOC101260578 LOC102584336 LOC107765624 HEME1 LOC100807032 LOC100803496 LOC103869973 LOC100252130 LOC18095486 LOC11416440 LOC107918050 LOC107898607 LOC107897251 LOC106423544 LOC106401372 LOC102620910 LOC4326635 LOC118473148 LOC118473149 LOC100192850 LOC123061522 LOC123070166 LOC123078601 LOC123443911 LOC8054902 LOC100835226 CHLRE_02g076300v5 CHLRE_02g073700v5
Function* uroporphyrinogen decarboxylase 1, chloroplastic uroporphyrinogen decarboxylase 1, chloroplastic uroporphyrinogen decarboxylase 1, chloroplastic Uroporphyrinogen decarboxylase uroporphyrinogen decarboxylase 1, chloroplastic uroporphyrinogen decarboxylase 1, chloroplastic uroporphyrinogen decarboxylase 1, chloroplastic uroporphyrinogen decarboxylase 1, chloroplastic uroporphyrinogen decarboxylase 1, chloroplastic uroporphyrinogen decarboxylase 1, chloroplastic uroporphyrinogen decarboxylase 1, chloroplastic uroporphyrinogen decarboxylase 1, chloroplastic uroporphyrinogen decarboxylase 1, chloroplastic uroporphyrinogen decarboxylase 1, chloroplastic uroporphyrinogen decarboxylase 1, chloroplastic uroporphyrinogen decarboxylase 1, chloroplastic uroporphyrinogen decarboxylase 1, chloroplastic-like uroporphyrinogen decarboxylase 1, chloroplastic uroporphyrinogen decarboxylase 1, chloroplastic uncharacterized LOC100192850 uroporphyrinogen decarboxylase 1, chloroplastic uroporphyrinogen decarboxylase 1, chloroplastic uroporphyrinogen decarboxylase 1, chloroplastic uroporphyrinogen decarboxylase 1, chloroplastic uroporphyrinogen decarboxylase 1, chloroplastic uroporphyrinogen decarboxylase 1, chloroplastic uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 3
sly00970 Aminoacyl-tRNA biosynthesis 2
sly00240 Pyrimidine metabolism 2
sly01232 Nucleotide metabolism 2
sly01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 12
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00860 Porphyrin metabolism 9
ath01240 Biosynthesis of cofactors 8
ath03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00860 Porphyrin metabolism 5
gma01240 Biosynthesis of cofactors 5
gma03010 Ribosome 4
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01240 Biosynthesis of cofactors 5
gma00860 Porphyrin metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00860 Porphyrin metabolism 6
bra01240 Biosynthesis of cofactors 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 5
vvi01240 Biosynthesis of cofactors 3
vvi03018 RNA degradation 2
vvi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 2
ppo01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 10
mtr01230 Biosynthesis of amino acids 2
mtr00860 Porphyrin metabolism 2
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01200 Carbon metabolism 7
ghi00260 Glycine, serine and threonine metabolism 6
ghi00630 Glyoxylate and dicarboxylate metabolism 6
ghi00860 Porphyrin metabolism 5
ghi01240 Biosynthesis of cofactors 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 7
ghi01240 Biosynthesis of cofactors 7
ghi00260 Glycine, serine and threonine metabolism 2
ghi00561 Glycerolipid metabolism 2
ghi00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 7
ghi01240 Biosynthesis of cofactors 7
ghi03010 Ribosome 4
ghi00260 Glycine, serine and threonine metabolism 3
ghi00630 Glyoxylate and dicarboxylate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 12
bna01240 Biosynthesis of cofactors 12
bna03010 Ribosome 3
bna00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 5
bna01240 Biosynthesis of cofactors 5
bna03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01240 Biosynthesis of cofactors 3
cit00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00860 Porphyrin metabolism 5
osa01240 Biosynthesis of cofactors 5
osa00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00860 Porphyrin metabolism 4
zma01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00860 Porphyrin metabolism 4
zma01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00860 Porphyrin metabolism 4
zma01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 15
tae00860 Porphyrin metabolism 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
tae04141 Protein processing in endoplasmic reticulum 3
tae04144 Endocytosis 3
tae00860 Porphyrin metabolism 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 7
tae00860 Porphyrin metabolism 3
tae01240 Biosynthesis of cofactors 3
tae00450 Selenocompound metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00970 Aminoacyl-tRNA biosynthesis 2
hvu00860 Porphyrin metabolism 2
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 4
sbi00860 Porphyrin metabolism 2
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 6
bdi01240 Biosynthesis of cofactors 4
bdi00860 Porphyrin metabolism 3
bdi00970 Aminoacyl-tRNA biosynthesis 2
bdi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00860 Porphyrin metabolism 7
cre01240 Biosynthesis of cofactors 3
cre00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00860 Porphyrin metabolism 10
cre01240 Biosynthesis of cofactors 5
cre00900 Terpenoid backbone biosynthesis 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101260578 102584336 107765624 820722 100807032 100803496 103869973 100252130 18095486 11416440 107918050 107898607 107897251 106423544 106401372 102620910 4326635 118473148 118473149 100192850 123061522 123070166 123078601 123443911 8054902 100835226 5727210 5727164
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