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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101260723   uncharacterized LOC101260723 
 sly-r.6   101260723   uncharacterized LOC101260723 
 sly-m.5   101260723   uncharacterized LOC101260723 
 ath-u.5   AT4G38350   Patched family protein 
 ath-u.5   AT1G42470   Patched family protein 
 gma-u.5   100813262   NPC intracellular cholesterol transporter 1 
 gma-u.5   100810332   NPC intracellular cholesterol transporter 1 
 gma-u.5   100795551   NPC intracellular cholesterol transporter 1 
 vvi-u.5   100242789   uncharacterized LOC100242789 
 vvi-u.5   100257163   uncharacterized LOC100257163 
 ppo-u.5   7481690   uncharacterized LOC7481690 
 ppo-u.5   7485640   uncharacterized LOC7485640 
 ppo-u.5   18096072   uncharacterized LOC18096072 
 mtr-u.5   11425301   NPC intracellular cholesterol transporter 1 
 mtr-u.5   25490313   NPC intracellular cholesterol transporter 1 
 osa-u.5   9266400   uncharacterized LOC9266400 
 zma-u.5   103641981   uncharacterized LOC103641981 

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Top 50 coexpressed genes to 101260723 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101260723 (sly-u.5 coexpression data)

CoexMap"101260723"


slyLOC101260723 | Entrez gene ID : 101260723      
Species sly ath gma vvi ppo mtr osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 3 2 3 2 3 2 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly04142 [list] [network] Lysosome (84 genes)
GO BP
GO:0015918 [list] [network] sterol transport  (6 genes)  IEA  
GO CC
GO:0016020 [list] [network] membrane  (3085 genes)  IEA  
GO MF
GO:0032934 [list] [network] sterol binding  (12 genes)  IEA  
GO:0005319 [list] [network] lipid transporter activity  (45 genes)  IEA  
Protein XP_004238435.1 [sequence] [blastp]
XP_025886684.1 [sequence] [blastp]
XP_069152616.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 9,  extr 1,  vacu 1  (predict for XP_004238435.1)
plas 8,  mito 1,  extr 1,  vacu 1  (predict for XP_025886684.1)
plas 9,  extr 1,  vacu 1  (predict for XP_069152616.1)
Subcellular
localization
TargetP
scret 7  (predict for XP_004238435.1)
scret 7  (predict for XP_025886684.1)
scret 7  (predict for XP_069152616.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101260723
sly-r.6
for
101260723
sly-m.5
for
101260723
ath-u.5
for
AT4G38350
ath-u.5
for
AT1G42470
gma-u.5
for
100813262
gma-u.5
for
100810332
gma-u.5
for
100795551
vvi-u.5
for
100242789
vvi-u.5
for
100257163
ppo-u.5
for
7481690
ppo-u.5
for
7485640
ppo-u.5
for
18096072
mtr-u.5
for
11425301
mtr-u.5
for
25490313
osa-u.5
for
9266400
zma-u.5
for
103641981


Ortholog ID: 5159
Species sly sot nta ath ath gma gma bra bra vvi vvi ppo ppo mtr mtr ghi ghi bna bna cit cit osa zma tae tae hvu sbi bdi cre
Symbol LOC101260723 LOC102600216 LOC107824090 AT4G38350 AT1G42470 LOC100810332 LOC100795551 LOC103835189 LOC103829698 LOC100242789 LOC100257163 LOC7481690 LOC18096072 LOC11425301 LOC25490313 LOC107922255 LOC107917961 LOC106446729 LOC106418356 LOC102618032 LOC102615536 LOC9266400 LOC103641981 LOC123190059 LOC123054170 LOC123427500 LOC8056603 LOC100832617 CHLRE_12g550900v5
Function* uncharacterized LOC101260723 Niemann-Pick C1 protein-like uncharacterized LOC107824090 Patched family protein Patched family protein NPC intracellular cholesterol transporter 1 NPC intracellular cholesterol transporter 1 NPC intracellular cholesterol transporter 1 NPC intracellular cholesterol transporter 1 uncharacterized LOC100242789 uncharacterized LOC100257163 uncharacterized LOC7481690 uncharacterized LOC18096072 NPC intracellular cholesterol transporter 1 NPC intracellular cholesterol transporter 1 NPC intracellular cholesterol transporter 1 NPC intracellular cholesterol transporter 1 NPC intracellular cholesterol transporter 1-like NPC intracellular cholesterol transporter 1-like uncharacterized LOC102618032 uncharacterized LOC102615536 uncharacterized LOC9266400 uncharacterized LOC103641981 NPC intracellular cholesterol transporter 1 NPC intracellular cholesterol transporter 1 NPC intracellular cholesterol transporter 1-like Niemann-Pick C1 protein NPC intracellular cholesterol transporter 1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03420 Nucleotide excision repair 2
gma04142 Lysosome 2
gma04136 Autophagy - other 2
gma04518 Integrin signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 4
gma04142 Lysosome 3
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00562 Inositol phosphate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00511 Other glycan degradation 2
vvi00600 Sphingolipid metabolism 2
vvi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 6
vvi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 4
ppo04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 2
mtr00562 Inositol phosphate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04136 Autophagy - other 3
ghi04518 Integrin signaling 3
ghi04142 Lysosome 2
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04136 Autophagy - other 3
ghi04518 Integrin signaling 3
ghi04142 Lysosome 2
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00061 Fatty acid biosynthesis 4
bna00620 Pyruvate metabolism 4
bna00640 Propanoate metabolism 4
bna01212 Fatty acid metabolism 4
bna04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00061 Fatty acid biosynthesis 4
bna00620 Pyruvate metabolism 4
bna00640 Propanoate metabolism 4
bna01212 Fatty acid metabolism 4
bna04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04136 Autophagy - other 3
cit00190 Oxidative phosphorylation 2
cit03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04142 Lysosome 3
tae00500 Starch and sucrose metabolism 3
tae00010 Glycolysis / Gluconeogenesis 2
tae00030 Pentose phosphate pathway 2
tae01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04142 Lysosome 3
tae00010 Glycolysis / Gluconeogenesis 2
tae00030 Pentose phosphate pathway 2
tae01200 Carbon metabolism 2
tae00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 2
hvu03013 Nucleocytoplasmic transport 2
hvu03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04148 Efferocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101260723 102600216 107824090 829992 840851 100810332 100795551 103835189 103829698 100242789 100257163 7481690 18096072 11425301 25490313 107922255 107917961 106446729 106418356 102618032 102615536 9266400 103641981 123190059 123054170 123427500 8056603 100832617 5719660
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