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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101260729   small ribosomal subunit protein eS28-like 
 sly-r.6   101260729   small ribosomal subunit protein eS28-like 
 sly-u.5   101258605   small ribosomal subunit protein eS28 
 sly-u.5   101248825   small ribosomal subunit protein eS28 
 ath-u.5   AT3G10090   Nucleic acid-binding, OB-fold-like protein 
 ath-u.5   AT5G03850   Nucleic acid-binding, OB-fold-like protein 
 ath-u.5   RPS28   ribosomal protein S28 
 gma-u.5   100811085   40S ribosomal protein S28 
 gma-u.5   100818200   40S ribosomal protein S28 
 gma-u.5   100306357   40S ribosomal protein S28 
 ppo-u.5   7486865   40S ribosomal protein S28-2 
 ppo-u.5   7491591   40S ribosomal protein S28-2 
 ppo-u.5   7488050   40S ribosomal protein S28-2 
 mtr-u.5   11441897   40S ribosomal protein S28-1 
 mtr-u.5   11414922   40S ribosomal protein S28-1 
 mtr-u.5   11412510   40S ribosomal protein S28 
 osa-u.5   4348607   small ribosomal subunit protein eS28 
 osa-u.5   4331742   small ribosomal subunit protein eS28 
 zma-u.5   100281083   40S ribosomal protein S28 
 zma-u.5   100280891   40S ribosomal protein S28 
 zma-u.5   100280715   40S ribosomal protein S28 

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Top 50 coexpressed genes to 101260729 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101260729 (sly-u.5 coexpression data)

CoexMap"101260729"


slyLOC101260729 | Entrez gene ID : 101260729    
Species sly ath gma ppo mtr osa zma bdi hvu bra vvi cit bna sbi ghi sot nta cre tae
Paralog 4 3 3 3 3 2 3 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly03010 [list] [network] Ribosome (6225 genes)
GO BP
GO:0000028 [list] [network] ribosomal small subunit assembly  (25 genes)  IEA  
GO:0030490 [list] [network] maturation of SSU-rRNA  (49 genes)  IEA  
GO:0006412 [list] [network] translation  (492 genes)  IEA  
GO CC
GO:0022627 [list] [network] cytosolic small ribosomal subunit  (79 genes)  IEA  
GO:0005840 [list] [network] ribosome  (354 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (342 genes)  IEA  
Protein XP_010321127.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 3,  nucl 2,  mito 2,  cyto 1,  plas 1,  cyto_plas 1  (predict for XP_010321127.2)
Subcellular
localization
TargetP
other 6  (predict for XP_010321127.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101260729
sly-r.6
for
101260729
sly-u.5
for
101258605
sly-u.5
for
101248825
ath-u.5
for
AT3G10090
ath-u.5
for
AT5G03850
ath-u.5
for
RPS28
gma-u.5
for
100811085
gma-u.5
for
100818200
gma-u.5
for
100306357
ppo-u.5
for
7486865
ppo-u.5
for
7491591
ppo-u.5
for
7488050
mtr-u.5
for
11441897
mtr-u.5
for
11414922
mtr-u.5
for
11412510
osa-u.5
for
4348607
osa-u.5
for
4331742
zma-u.5
for
100281083
zma-u.5
for
100280891
zma-u.5
for
100280715


Ortholog ID: 2404
Species sly sly sot sot ath ath gma gma bra ppo ppo mtr mtr ghi ghi bna cit osa osa zma zma tae tae hvu hvu sbi sbi bdi bdi cre
Symbol LOC101248825 LOC101258605 LOC102603576 LOC102583160 RPS28 AT3G10090 LOC100818200 LOC100790570 LOC103850516 LOC7491591 LOC7488050 LOC11412510 LOC11414922 LOC107891219 LOC107889469 LOC106433845 LOC102622872 LOC4348607 LOC4331742 LOC100280891 LOC100280715 LOC123081010 LOC123083827 LOC123445707 LOC123445709 LOC110431762 LOC8082135 LOC100831273 LOC104584494 CHLRE_12g510450v5
Function* small ribosomal subunit protein eS28 small ribosomal subunit protein eS28 40S ribosomal protein S28-like 40S ribosomal protein S28 ribosomal protein S28 Nucleic acid-binding, OB-fold-like protein 40S ribosomal protein S28 40S ribosomal protein S28 40S ribosomal protein S28-2 40S ribosomal protein S28-2 40S ribosomal protein S28-2 40S ribosomal protein S28 40S ribosomal protein S28-1 40S ribosomal protein S28 40S ribosomal protein S28 40S ribosomal protein S28-1 40S ribosomal protein S28 small ribosomal subunit protein eS28 small ribosomal subunit protein eS28 40S ribosomal protein S28 40S ribosomal protein S28 40S ribosomal protein S28 uncharacterized LOC123083827 40S ribosomal protein S28 40S ribosomal protein S28 40S ribosomal protein S28 40S ribosomal protein S28 40S ribosomal protein S28 40S ribosomal protein S28 ribosomal protein S28
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 16
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 10
ppo03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 10
mtr04141 Protein processing in endoplasmic reticulum 3
mtr03040 Spliceosome 2
mtr04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 7
ghi03015 mRNA surveillance pathway 2
ghi00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 16
zma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 20
hvu04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 10
sbi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 20
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101248825 101258605 102603576 102583160 836535 820170 100818200 100790570 103850516 7491591 7488050 11412510 11414922 107891219 107889469 106433845 102622872 4348607 4331742 100280891 100280715 123081010 123083827 123445707 123445709 110431762 8082135 100831273 104584494 5716568
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