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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101260770   uncharacterized LOC101260770 
 sly-r.6   101260770   uncharacterized LOC101260770 
 sly-m.5   101260770   uncharacterized LOC101260770 
 ath-u.5   AT1G50000   methyltransferase 
 gma-u.5   100777253   ribosomal RNA small subunit methyltransferase E 
 vvi-u.5   100258322   uncharacterized LOC100258322 
 ppo-u.5   7470758   uncharacterized LOC7470758 
 mtr-u.5   25485320   ribosomal RNA small subunit methyltransferase E 
 osa-u.5   4333992   uncharacterized LOC4333992 
 zma-u.5   100279709   uncharacterized LOC100279709 
 zma-u.5   103653089   uncharacterized LOC103653089 

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Top 50 coexpressed genes to 101260770 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101260770 (sly-u.5 coexpression data)

CoexMap"101260770"


slyLOC101260770 | Entrez gene ID : 101260770    
Species sly ath gma vvi ppo mtr osa zma hvu sot tae nta bra cit ghi bna bdi sbi cre
Paralog 3 1 1 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0070475 [list] [network] rRNA base methylation  (13 genes)  IEA  
GO CC
GO MF
GO:0070042 [list] [network] rRNA (uridine-N3-)-methyltransferase activity  (2 genes)  IEA  
Protein XP_004230680.1 [sequence] [blastp]
XP_010315172.1 [sequence] [blastp]
XP_069149042.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_004230680.1)
chlo 10  (predict for XP_010315172.1)
chlo 10  (predict for XP_069149042.1)
Subcellular
localization
TargetP
chlo 9,  mito 3  (predict for XP_004230680.1)
chlo 9,  mito 3  (predict for XP_010315172.1)
chlo 9,  mito 3  (predict for XP_069149042.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101260770

.
sly-r.6
for
101260770

.
sly-m.5
for
101260770

.
ath-u.5
for
AT1G50000

.
gma-u.5
for
100777253

.
vvi-u.5
for
100258322

.
ppo-u.5
for
7470758

.
mtr-u.5
for
25485320

.
osa-u.5
for
4333992

.
zma-u.5
for
100279709

.
zma-u.5
for
103653089

.


Ortholog ID: 9836
Species ath gma sly osa zma zma bra vvi ppo mtr ghi ghi cre sbi sot cit bdi nta nta
Symbol AT1G50000 LOC100777253 LOC101260770 LOC4333992 LOC100279709 LOC103653089 LOC103871373 LOC100258322 LOC7470758 LOC25485320 LOC107947400 LOC121224623 CHLRE_03g175800v5 LOC8060533 LOC102579517 LOC102624062 LOC100841987 LOC107815886 LOC107814615
Function* methyltransferase ribosomal RNA small subunit methyltransferase E uncharacterized LOC101260770 uncharacterized LOC4333992 uncharacterized LOC100279709 uncharacterized LOC103653089 ribosomal RNA small subunit methyltransferase E uncharacterized LOC100258322 uncharacterized LOC7470758 ribosomal RNA small subunit methyltransferase E ribosomal RNA small subunit methyltransferase E ribosomal RNA small subunit methyltransferase E uncharacterized protein ribosomal RNA small subunit methyltransferase E ribosomal RNA small subunit methyltransferase E uncharacterized LOC102624062 ribosomal RNA small subunit methyltransferase E uncharacterized LOC107815886 uncharacterized LOC107814615
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03013 Nucleocytoplasmic transport 2
sly03015 mRNA surveillance pathway 2
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 5
mtr03008 Ribosome biogenesis in eukaryotes 2
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03410 Base excision repair 4
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03410 Base excision repair 4
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03410 Base excision repair 2
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03410 Base excision repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 841424 100777253 101260770 4333992 100279709 103653089 103871373 100258322 7470758 25485320 107947400 121224623 5728859 8060533 102579517 102624062 100841987 107815886 107814615
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