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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101260988   nuclear transcription factor Y subunit A-7 
 sly-r.6   101260988   nuclear transcription factor Y subunit A-7 
 sot-r.1   102579930   nuclear transcription factor Y subunit A-7-like 
 sot-r.1   102600275   nuclear transcription factor Y subunit A-7 
 nta-r.1   107787566   nuclear transcription factor Y subunit A-7 
 nta-r.1   107821024   uncharacterized LOC107821024 
 nta-r.1   107807858   nuclear transcription factor Y subunit A-7-like 
 ath-u.5   NF-YA4   nuclear factor Y, subunit A4 
 ath-u.5   NF-YA7   nuclear factor Y, subunit A7 
 gma-u.5   100499754   putative CCAAT-binding transcription factor 
 gma-u.5   NF-YA16   nuclear transcription factor Y subunit A-16 
 gma-u.5   NF-YA08   nuclear transcription factor Y subunit A-8 
 bra-r.6   103840389   nuclear transcription factor Y subunit A-7 
 bra-r.6   103867423   nuclear transcription factor Y subunit A-4 
 bra-r.6   103832749   nuclear transcription factor Y subunit A-5 
 vvi-u.5   100249692   nuclear transcription factor Y subunit A-7 
 ppo-u.5   7487567   nuclear transcription factor Y subunit A-7 
 ppo-u.5   18103293   nuclear transcription factor Y subunit A-7 
 mtr-u.5   11413865   nuclear transcription factor Y subunit A-7 
 ghi-r.1   107930306   nuclear transcription factor Y subunit A-7 
 ghi-r.1   107958516   nuclear transcription factor Y subunit A-7 
 ghi-r.1   107906314   nuclear transcription factor Y subunit A-7 
 bna-r.1   106396602   nuclear transcription factor Y subunit A-4 
 bna-r.1   125600621   nuclear transcription factor Y subunit A-4-like 
 cit-r.1   102608084   nuclear transcription factor Y subunit A-7 
 osa-u.5   4352778   nuclear transcription factor Y subunit A-7 
 osa-u.5   4344874   nuclear transcription factor Y subunit A-4 
 zma-u.5   100194365   uncharacterized LOC100194365 
 zma-u.5   100284857   uncharacterized LOC100284857 
 zma-u.5   100383246   uncharacterized LOC100383246 
 tae-r.2   123119379   nuclear transcription factor Y subunit A-7 
 tae-r.2   543152   nuclear transcription factor Y subunit A-7 
 tae-r.2   123102190   nuclear transcription factor Y subunit A-7 
 hvu-r.1   123449586   nuclear transcription factor Y subunit A-7-like 
 hvu-r.1   123396343   nuclear transcription factor Y subunit A-7 
 sbi-r.1   8059799   nuclear transcription factor Y subunit A-7 
 sbi-r.1   8070158   nuclear transcription factor Y subunit A-7 
 bdi-r.1   100842793   nuclear transcription factor Y subunit A-7 
 bdi-r.1   100844028   nuclear transcription factor Y subunit A-7 

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Top 50 coexpressed genes to 101260988 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101260988 (sly-u.5 coexpression data)

CoexMap"101260988"


slyLOC101260988 | Entrez gene ID : 101260988      
Species sly sot nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 2 2 3 2 3 3 1 2 1 3 2 1 2 3 3 2 2 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (493 genes)  IEA  
GO CC
GO:0016602 [list] [network] CCAAT-binding factor complex  (30 genes)  IEA  
GO MF
GO:0000981 [list] [network] DNA-binding transcription factor activity, RNA polymerase II-specific  (326 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (1883 genes)  IEA  
Protein XP_004233167.3 [sequence] [blastp]
XP_069149646.1 [sequence] [blastp]
XP_069149647.1 [sequence] [blastp]
XP_069149648.1 [sequence] [blastp]
XP_069149649.1 [sequence] [blastp]
XP_069149650.1 [sequence] [blastp]
XP_069149651.1 [sequence] [blastp]
XP_069149652.1 [sequence] [blastp]
XP_069149653.1 [sequence] [blastp]
XP_069149654.1 [sequence] [blastp]
XP_069149655.1 [sequence] [blastp]
XP_069149656.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_004233167.3)
nucl 10  (predict for XP_069149646.1)
nucl 10  (predict for XP_069149647.1)
nucl 10  (predict for XP_069149648.1)
nucl 10  (predict for XP_069149649.1)
nucl 10  (predict for XP_069149650.1)
nucl 10  (predict for XP_069149651.1)
nucl 10  (predict for XP_069149652.1)
nucl 10  (predict for XP_069149653.1)
nucl 10  (predict for XP_069149654.1)
nucl 10  (predict for XP_069149655.1)
nucl 10  (predict for XP_069149656.1)
Subcellular
localization
TargetP
other 8,  chlo 5  (predict for XP_004233167.3)
other 8,  chlo 5  (predict for XP_069149646.1)
other 8,  chlo 5  (predict for XP_069149647.1)
other 8,  chlo 5  (predict for XP_069149648.1)
other 8,  chlo 5  (predict for XP_069149649.1)
other 8,  chlo 5  (predict for XP_069149650.1)
other 8,  chlo 5  (predict for XP_069149651.1)
other 8,  chlo 5  (predict for XP_069149652.1)
other 8,  chlo 5  (predict for XP_069149653.1)
other 8,  chlo 5  (predict for XP_069149654.1)
other 8,  chlo 5  (predict for XP_069149655.1)
other 8,  chlo 5  (predict for XP_069149656.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101260988
sly-r.6
for
101260988
sot-r.1
for
102579930
sot-r.1
for
102600275
nta-r.1
for
107787566
nta-r.1
for
107821024
nta-r.1
for
107807858
ath-u.5
for
NF-YA4
ath-u.5
for
NF-YA7
gma-u.5
for
100499754
gma-u.5
for
NF-YA16
gma-u.5
for
NF-YA08
bra-r.6
for
103840389
bra-r.6
for
103867423
bra-r.6
for
103832749
vvi-u.5
for
100249692
ppo-u.5
for
7487567
ppo-u.5
for
18103293
mtr-u.5
for
11413865
ghi-r.1
for
107930306
ghi-r.1
for
107958516
ghi-r.1
for
107906314
bna-r.1
for
106396602
bna-r.1
for
125600621
cit-r.1
for
102608084
osa-u.5
for
4352778
osa-u.5
for
4344874
zma-u.5
for
100194365
zma-u.5
for
100284857
zma-u.5
for
100383246
tae-r.2
for
123119379
tae-r.2
for
543152
tae-r.2
for
123102190
hvu-r.1
for
123449586
hvu-r.1
for
123396343
sbi-r.1
for
8059799
sbi-r.1
for
8070158
bdi-r.1
for
100842793
bdi-r.1
for
100844028


Ortholog ID: 3914
Species sly sot sot nta nta nta ath ath gma gma gma bra bra bra vvi ppo ppo mtr ghi ghi ghi bna bna bna cit osa osa zma zma zma tae tae tae hvu hvu sbi sbi bdi bdi
Symbol LOC101260988 LOC102579930 LOC102600275 LOC107787566 LOC107821024 LOC107807858 NF-YA4 NF-YA7 LOC100499754 NF-YA16 NF-YA04 LOC103840389 LOC103867423 LOC103832749 LOC100249692 LOC7487567 LOC18103293 LOC11413865 LOC107930306 LOC107906314 LOC107924915 LOC125600621 LOC106367269 LOC125609344 LOC102608084 LOC4352778 LOC4344874 LOC100194365 LOC100284857 LOC100383246 LOC123119379 LOC543152 LOC100037532 LOC123449586 LOC123396343 LOC8059799 LOC8070158 LOC100842793 LOC100844028
Function* nuclear transcription factor Y subunit A-7 nuclear transcription factor Y subunit A-7-like nuclear transcription factor Y subunit A-7 nuclear transcription factor Y subunit A-7 uncharacterized LOC107821024 nuclear transcription factor Y subunit A-7-like nuclear factor Y, subunit A4 nuclear factor Y, subunit A7 putative CCAAT-binding transcription factor nuclear transcription factor Y subunit A-16 nuclear transcription factor Y subunit A-4 nuclear transcription factor Y subunit A-7 nuclear transcription factor Y subunit A-4 nuclear transcription factor Y subunit A-5 nuclear transcription factor Y subunit A-7 nuclear transcription factor Y subunit A-7 nuclear transcription factor Y subunit A-7 nuclear transcription factor Y subunit A-7 nuclear transcription factor Y subunit A-7 nuclear transcription factor Y subunit A-7 nuclear transcription factor Y subunit A-7 nuclear transcription factor Y subunit A-4-like nuclear transcription factor Y subunit A-7 nuclear transcription factor Y subunit A-4-like nuclear transcription factor Y subunit A-7 nuclear transcription factor Y subunit A-7 nuclear transcription factor Y subunit A-4 uncharacterized LOC100194365 uncharacterized LOC100284857 uncharacterized LOC100383246 nuclear transcription factor Y subunit A-7 nuclear transcription factor Y subunit A-7 nuclear transcription factor Y subunit A-7 nuclear transcription factor Y subunit A-7-like nuclear transcription factor Y subunit A-7 nuclear transcription factor Y subunit A-7 nuclear transcription factor Y subunit A-7 nuclear transcription factor Y subunit A-7 nuclear transcription factor Y subunit A-7
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00860 Porphyrin metabolism 3
sly04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00561 Glycerolipid metabolism 3
ath00566 Sulfoquinovose metabolism 3
ath00740 Riboflavin metabolism 2
ath01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04016 MAPK signaling pathway - plant 2
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00330 Arginine and proline metabolism 4
bra01230 Biosynthesis of amino acids 4
bra04016 MAPK signaling pathway - plant 2
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 9
ppo04626 Plant-pathogen interaction 4
ppo03040 Spliceosome 3
ppo04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04712 Circadian rhythm - plant 5
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04712 Circadian rhythm - plant 4
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04712 Circadian rhythm - plant 5
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04712 Circadian rhythm - plant 3
bna00052 Galactose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00010 Glycolysis / Gluconeogenesis 4
bna00020 Citrate cycle (TCA cycle) 4
bna00620 Pyruvate metabolism 4
bna00785 Lipoic acid metabolism 4
bna01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04712 Circadian rhythm - plant 3
bna00052 Galactose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00564 Glycerophospholipid metabolism 2
osa04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101260988 102579930 102600275 107787566 107821024 107807858 818037 839929 100499754 100809036 100805791 103840389 103867423 103832749 100249692 7487567 18103293 11413865 107930306 107906314 107924915 125600621 106367269 125609344 102608084 4352778 4344874 100194365 100284857 100383246 123119379 543152 100037532 123449586 123396343 8059799 8070158 100842793 100844028
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