ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sly-u.5	101261182	large ribosomal subunit protein uL24z
sly-r.6	101261182	large ribosomal subunit protein uL24z
sly-m.5	101261182	large ribosomal subunit protein uL24z
sly-u.5	101267290	large ribosomal subunit protein uL24z
sly-u.5	101246988	large ribosomal subunit protein uL24z
sot-r.1	102596561	60S ribosomal protein L26-1-like
sot-r.1	102588872	60S ribosomal protein L26-1
nta-r.1	107829238	large ribosomal subunit protein uL24z
nta-r.1	107826309	large ribosomal subunit protein uL24z-like
nta-r.1	107817208	large ribosomal subunit protein uL24z
ath-u.5	AT3G49910	Translation protein SH3-like family protein
ath-u.5	AT5G67510	Translation protein SH3-like family protein
gma-u.5	100775705	60S ribosomal protein L26-1
gma-u.5	100818263	60S ribosomal protein L26-1
gma-u.5	100788996	putative 60S ribosomal protein L26
bra-r.6	103840913	60S ribosomal protein L26-1
bra-r.6	103827745	60S ribosomal protein L26-1
bra-r.6	103860635	60S ribosomal protein L26-1
vvi-u.5	100242242	large ribosomal subunit protein uL24z
vvi-u.5	100267018	60S ribosomal protein L26-1-like
ppo-u.5	7456938	60S ribosomal protein L26-1
ppo-u.5	18101102	60S ribosomal protein L26-1
ppo-u.5	7486328	60S ribosomal protein L26-1
mtr-u.5	11425151	60S ribosomal protein L26-2
mtr-u.5	11425352	60S ribosomal protein L26-1
mtr-u.5	11436692	60S ribosomal protein L26-1
ghi-r.1	107914344	60S ribosomal protein L26-1
ghi-r.1	107932587	60S ribosomal protein L26-1
bna-r.1	106451943	60S ribosomal protein L26-1-like
bna-r.1	106448068	60S ribosomal protein L26-1
bna-r.1	106390881	60S ribosomal protein L26-1
cit-r.1	102621144	60S ribosomal protein L26-1
osa-u.5	4351513	large ribosomal subunit protein uL24z
osa-u.5	4349791	large ribosomal subunit protein uL24z
osa-u.5	4325478	large ribosomal subunit protein uL24z
zma-u.5	100285268	60S ribosomal protein L26-1
zma-u.5	542610	60S ribosomal protein L26-1
tae-r.2	123069181	60S ribosomal protein L26-1
tae-r.2	123060594	60S ribosomal protein L26-1
tae-r.2	123077703	60S ribosomal protein L26-1
hvu-r.1	123443110	60S ribosomal protein L26-1-like
sbi-r.1	8073332	60S ribosomal protein L26-1
bdi-r.1	100826639	60S ribosomal protein L26-1
cre-r.1	CHLRE_01g040000v5	ribosomal protein L26

Top 50 coexpressed genes to 101261182 (sly-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 101261182 (sly-u.5 coexpression data)

CoexMap"101261182"

[Cytoscape]

Annotation

functional annotation

KEGG

sly03010 [list] [network] Ribosome (6225 genes)

GO BP

GO:0002181 [list] [network] cytoplasmic translation	(74 genes)	IEA
GO:0042273 [list] [network] ribosomal large subunit biogenesis	(92 genes)	IEA

GO CC

GO:0022625 [list] [network] cytosolic large ribosomal subunit	(140 genes)	IEA
GO:0005840 [list] [network] ribosome	(354 genes)	IEA

GO MF

GO:0003735 [list] [network] structural constituent of ribosome	(342 genes)	IEA
GO:0003723 [list] [network] RNA binding	(1208 genes)	IEA

Protein

XP_004231922.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 4, mito 4, chlo 1, nucl 1

(predict for XP_004231922.1)

Subcellular
localization
TargetP

mito 8, chlo 5

(predict for XP_004231922.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sly-u.5 for 101261182	sly-r.6 for 101261182	sly-m.5 for 101261182	sly-u.5 for 101267290	sly-u.5 for 101246988	sot-r.1 for 102596561	sot-r.1 for 102588872	nta-r.1 for 107829238	nta-r.1 for 107826309	nta-r.1 for 107817208	ath-u.5 for AT3G49910	ath-u.5 for AT5G67510	gma-u.5 for 100775705	gma-u.5 for 100818263	gma-u.5 for 100788996	bra-r.6 for 103840913	bra-r.6 for 103827745	bra-r.6 for 103860635	vvi-u.5 for 100242242	vvi-u.5 for 100267018	ppo-u.5 for 7456938	ppo-u.5 for 18101102	ppo-u.5 for 7486328	mtr-u.5 for 11425151	mtr-u.5 for 11425352	mtr-u.5 for 11436692	ghi-r.1 for 107914344	ghi-r.1 for 107932587	bna-r.1 for 106451943	bna-r.1 for 106448068	bna-r.1 for 106390881	cit-r.1 for 102621144	osa-u.5 for 4351513	osa-u.5 for 4349791	osa-u.5 for 4325478	zma-u.5 for 100285268	zma-u.5 for 542610	tae-r.2 for 123069181	tae-r.2 for 123060594	tae-r.2 for 123077703	hvu-r.1 for 123443110	sbi-r.1 for 8073332	bdi-r.1 for 100826639	cre-r.1 for CHLRE_01g040000v5

Ortholog

Ortholog ID: 2654

Species

sly

sot

nta

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

large ribosomal subunit protein uL24z

60S ribosomal protein L26-1-like

60S ribosomal protein L26-1

large ribosomal subunit protein uL24z-like

large ribosomal subunit protein uL24z

Translation protein SH3-like family protein

60S ribosomal protein L26-1

putative 60S ribosomal protein L26

60S ribosomal protein L26-1

large ribosomal subunit protein uL24z

60S ribosomal protein L26-1-like

60S ribosomal protein L26-1

60S ribosomal protein L26-2

60S ribosomal protein L26-1

60S ribosomal protein L26-1-like

60S ribosomal protein L26-1

large ribosomal subunit protein uL24z

60S ribosomal protein L26-1

60S ribosomal protein L26-1-like

60S ribosomal protein L26-1

ribosomal protein L26

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	16
sly04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	13
nta00190	Oxidative phosphorylation	2
nta03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	21

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	16

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	20
gma04120	Ubiquitin mediated proteolysis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	21

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	21
bra04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	17
vvi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	15
vvi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	18
ppo03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	21
ppo04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	19
ppo04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	17
mtr04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	13

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	12

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	13

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	12

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	18
cit04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	17
osa04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	15
osa03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	16

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	16

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	15
tae00750	Vitamin B6 metabolism	3
tae01240	Biosynthesis of cofactors	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	16

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	15

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	16

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03010	Ribosome	21

Expression

Expression pattern

Entrez Gene ID^*

101261182

101267290

101246988

102596561

102588872

107826309

107801513

107831809

824153

836887

100775705

100818263

100788996

103840913

103827745

103860635

100242242

100267018

7456938

18101102

7486328

11425151

11425352

11436692

121215296

107924753

106390881

106402150

106451222

102621144

4351513

4349791

4325478

100285268

542610

123069181

123060594

123077703

123443110

8073332

100826639

5715546

The preparation time of this page was 0.1 [sec].


Species	sly	sot	nta	ath	gma	bra	vvi	ppo	mtr	ghi	bna	cit	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	5	2	3	2	3	3	2	3	3	2	3	1	3	2	3	1	1	1	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 101261182 (sly-u.5 coexpression data)

Top 50 enrichment test to 101261182 (sly-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**