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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5  101261216  putative pentatricopeptide repeat-containing protein At5g52630 
 sly-r.6  101261216  putative pentatricopeptide repeat-containing protein At5g52630 
 gma-u.5  100792064  pentatricopeptide repeat-containing protein At4g33170 
 gma-u.5  100808258  pentatricopeptide repeat-containing protein At4g33170 
 vvi-u.5  100241570  putative pentatricopeptide repeat-containing protein At5g52630 
 zma-u.5  100281446  vegetative storage protein 
 zma-u.5  103642182  pentatricopeptide repeat-containing protein, mitochondrial-like 

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Top 50 coexpressed genes to 101261216 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101261216 (sly-u.5 coexpression data)

CoexMap"101261216"


slyLOC101261216 | Entrez gene ID : 101261216
Species sly gma vvi zma tae hvu cit bra ghi osa mtr ppo sbi ath bdi nta bna cre sot
Paralog 2 2 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (280 genes)  IEA  
GO CC
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (5687 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (1208 genes)  IEA  
GO:0008270 [list] [network] zinc ion binding  (1242 genes)  IEA  
GO:0005515 [list] [network] protein binding  (3982 genes)  IEA  
Protein XP_010318552.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 7,  pero 1,  chlo 1,  nucl 1  (predict for XP_010318552.1)
Subcellular
localization
TargetP
other 3  (predict for XP_010318552.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

sly-u.5
for
101261216


sly-r.6
for
101261216


gma-u.5
for
100792064


gma-u.5
for
100808258


vvi-u.5
for
100241570


zma-u.5
for
100281446


zma-u.5
for
103642182



Ortholog ID: 13500
Species sly sot nta nta gma gma vvi ghi ghi cit zma zma sbi bdi
Symbol LOC101261216 LOC102597605 LOC107785745 LOC107830834 LOC100792064 LOC100808258 LOC100241570 LOC107940135 LOC107932103 LOC102628290 LOC103642182 LOC100281446 LOC8080591 LOC100821960
Function* putative pentatricopeptide repeat-containing protein At5g52630 putative pentatricopeptide repeat-containing protein At5g52630 putative pentatricopeptide repeat-containing protein At5g52630 putative pentatricopeptide repeat-containing protein At5g52630 pentatricopeptide repeat-containing protein At4g33170 pentatricopeptide repeat-containing protein At4g33170 putative pentatricopeptide repeat-containing protein At5g52630 putative pentatricopeptide repeat-containing protein At5g52630 putative pentatricopeptide repeat-containing protein At5g52630 putative pentatricopeptide repeat-containing protein At5g52630 pentatricopeptide repeat-containing protein, mitochondrial-like vegetative storage protein pentatricopeptide repeat-containing protein At2g03880, mitochondrial pentatricopeptide repeat-containing protein At2g03880, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
vvi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00592 alpha-Linolenic acid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101261216 102597605 107785745 107830834 100792064 100808258 100241570 107940135 107932103 102628290 103642182 100281446 8080591 100821960
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