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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101261300   clathrin light chain 1 
 sly-r.6   101261300   clathrin light chain 1 
 sly-m.5   101261300   clathrin light chain 1 
 sly-u.5   101266991   clathrin light chain 1 
 sly-u.5   101250146   clathrin light chain 2 
 sot-r.1   102604022   clathrin light chain 1-like 
 sot-r.1   102585812   clathrin light chain 2-like 
 sot-r.1   102601027   clathrin light chain 1-like 
 nta-r.1   107760966   clathrin light chain 2 
 nta-r.1   107822315   clathrin light chain 2 
 nta-r.1   107818908   clathrin light chain 1 
 ath-u.5   AT2G20760   Clathrin light chain protein 
 ath-u.5   CLC2   Clathrin light chain protein 
 ath-u.5   AT3G51890   Clathrin light chain protein 
 gma-u.5   100813474   uncharacterized LOC100813474 
 gma-u.5   100788673   clathrin light chain 1 
 gma-u.5   100783050   clathrin light chain 1 
 bra-r.6   103846752   clathrin light chain 2 
 bra-r.6   103866986   clathrin light chain 2 
 bra-r.6   103865762   clathrin light chain 2 
 vvi-u.5   100248438   clathrin light chain 2 
 vvi-u.5   100854215   clathrin light chain 1 
 ppo-u.5   7466063   clathrin light chain 2 
 ppo-u.5   7488013   clathrin light chain 2 
 ppo-u.5   7490332   clathrin light chain 2 
 mtr-u.5   11421620   clathrin light chain 1 
 mtr-u.5   25493188   clathrin light chain 1 
 ghi-r.1   107955167   clathrin light chain 2 
 ghi-r.1   107937771   clathrin light chain 1 
 ghi-r.1   107929283   clathrin light chain 2 
 bna-r.1   106401383   clathrin light chain 2-like 
 bna-r.1   106416055   clathrin light chain 2-like 
 bna-r.1   106368789   clathrin light chain 1 
 cit-r.1   102610420   clathrin light chain 2 
 cit-r.1   102626898   clathrin light chain 3-like 
 osa-u.5   4337419   clathrin light chain 1-like 
 osa-u.5   4342159   clathrin light chain 2-like 
 zma-u.5   100277113   uncharacterized LOC100277113 
 zma-u.5   113475843   uncharacterized LOC113475843 
 zma-u.5   100216721   Clathrin light chain 2 
 tae-r.2   123172070   clathrin light chain 2 
 tae-r.2   123047422   clathrin light chain 1 
 tae-r.2   123055225   clathrin light chain 1 
 hvu-r.1   123428331   clathrin light chain 1-like 
 hvu-r.1   123407289   clathrin light chain 2 
 sbi-r.1   8076473   clathrin light chain 1 
 sbi-r.1   8069249   clathrin light chain 2 
 bdi-r.1   100829679   clathrin light chain 2 
 bdi-r.1   100825998   clathrin light chain 1 

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Top 50 coexpressed genes to 101261300 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101261300 (sly-u.5 coexpression data)

CoexMap"101261300"


slyLOC101261300 | Entrez gene ID : 101261300      
Species sly sot nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 5 3 3 3 3 3 2 3 2 3 3 2 2 3 3 2 2 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0072583 [list] [network] clathrin-dependent endocytosis  (31 genes)  IEA  
GO:0006886 [list] [network] intracellular protein transport  (272 genes)  IEA  
GO CC
GO:0030130 [list] [network] clathrin coat of trans-Golgi network vesicle  (10 genes)  IEA  
GO:0030132 [list] [network] clathrin coat of coated pit  (11 genes)  IEA  
GO:0005886 [list] [network] plasma membrane  (899 genes)  IEA  
GO MF
GO:0032050 [list] [network] clathrin heavy chain binding  (21 genes)  IEA  
GO:0005198 [list] [network] structural molecule activity  (479 genes)  IEA  
Protein XP_004234124.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  chlo 1,  plas 1  (predict for XP_004234124.1)
Subcellular
localization
TargetP
other 8  (predict for XP_004234124.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101261300
sly-r.6
for
101261300
sly-m.5
for
101261300
sly-u.5
for
101266991
sly-u.5
for
101250146
sot-r.1
for
102604022
sot-r.1
for
102585812
sot-r.1
for
102601027
nta-r.1
for
107760966
nta-r.1
for
107822315
nta-r.1
for
107818908
ath-u.5
for
AT2G20760
ath-u.5
for
CLC2
ath-u.5
for
AT3G51890
gma-u.5
for
100813474
gma-u.5
for
100788673
gma-u.5
for
100783050
bra-r.6
for
103846752
bra-r.6
for
103866986
bra-r.6
for
103865762
vvi-u.5
for
100248438
vvi-u.5
for
100854215
ppo-u.5
for
7466063
ppo-u.5
for
7488013
ppo-u.5
for
7490332
mtr-u.5
for
11421620
mtr-u.5
for
25493188
ghi-r.1
for
107955167
ghi-r.1
for
107937771
ghi-r.1
for
107929283
bna-r.1
for
106401383
bna-r.1
for
106416055
bna-r.1
for
106368789
cit-r.1
for
102610420
cit-r.1
for
102626898
osa-u.5
for
4337419
osa-u.5
for
4342159
zma-u.5
for
100277113
zma-u.5
for
113475843
zma-u.5
for
100216721
tae-r.2
for
123172070
tae-r.2
for
123047422
tae-r.2
for
123055225
hvu-r.1
for
123428331
hvu-r.1
for
123407289
sbi-r.1
for
8076473
sbi-r.1
for
8069249
bdi-r.1
for
100829679
bdi-r.1
for
100825998


Ortholog ID: 1452
Species sly sly sly sot sot sot nta nta nta ath ath ath gma gma gma bra bra bra vvi vvi ppo ppo ppo mtr mtr ghi ghi ghi bna bna bna cit cit osa osa zma zma zma tae tae tae hvu hvu sbi sbi bdi bdi
Symbol LOC101261300 LOC101266991 LOC101250146 LOC102604022 LOC102585812 LOC102601027 LOC107760966 LOC107818908 LOC107763511 AT2G20760 CLC2 AT3G51890 LOC100813474 LOC100788673 LOC100820255 LOC103846752 LOC103866986 LOC103842584 LOC100248438 LOC100854215 LOC7466063 LOC7488013 LOC7490332 LOC11421620 LOC25493188 LOC107929283 LOC107960000 LOC121212704 LOC106368789 LOC106391573 LOC106420762 LOC102626898 LOC102611533 LOC4337419 LOC4342159 LOC100277113 LOC113475843 LOC100216721 LOC123149908 LOC123164928 LOC123191067 LOC123428331 LOC123407289 LOC8076473 LOC8069249 LOC100829679 LOC100825998
Function* clathrin light chain 1 clathrin light chain 1 clathrin light chain 2 clathrin light chain 1-like clathrin light chain 2-like clathrin light chain 1-like clathrin light chain 2 clathrin light chain 1 clathrin light chain 2-like Clathrin light chain protein Clathrin light chain protein Clathrin light chain protein uncharacterized LOC100813474 clathrin light chain 1 clathrin light chain 1 clathrin light chain 2 clathrin light chain 2 clathrin light chain 1 clathrin light chain 2 clathrin light chain 1 clathrin light chain 2 clathrin light chain 2 clathrin light chain 2 clathrin light chain 1 clathrin light chain 1 clathrin light chain 2 clathrin light chain 2 clathrin light chain 2 clathrin light chain 1 clathrin light chain 2 clathrin light chain 2-like clathrin light chain 3-like clathrin light chain 1-like clathrin light chain 1-like clathrin light chain 2-like uncharacterized LOC100277113 uncharacterized LOC113475843 Clathrin light chain 2 clathrin light chain 2 clathrin light chain 2 clathrin light chain 1 clathrin light chain 1-like clathrin light chain 2 clathrin light chain 1 clathrin light chain 2 clathrin light chain 2 clathrin light chain 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 3
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04144 Endocytosis 3
sot03250 Viral life cycle - HIV-1 2
sot03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 4
nta04130 SNARE interactions in vesicular transport 4
nta04145 Phagosome 2
nta04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 8
nta04145 Phagosome 8
nta04142 Lysosome 6
nta04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04517 IgSF CAM signaling 2
nta04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 2
ath03020 RNA polymerase 2
ath03420 Nucleotide excision repair 2
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 4
gma05100 Bacterial invasion of epithelial cells 3
gma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00520 Amino sugar and nucleotide sugar metabolism 2
gma01250 Biosynthesis of nucleotide sugars 2
gma00230 Purine metabolism 2
gma00240 Pyrimidine metabolism 2
gma01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04130 SNARE interactions in vesicular transport 4
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03060 Protein export 4
bra04141 Protein processing in endoplasmic reticulum 4
bra04145 Phagosome 4
bra04016 MAPK signaling pathway - plant 2
bra04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 3
vvi00071 Fatty acid degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01250 Biosynthesis of nucleotide sugars 4
vvi00520 Amino sugar and nucleotide sugar metabolism 3
vvi00541 Biosynthesis of various nucleotide sugars 2
vvi04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
ppo00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00190 Oxidative phosphorylation 4
ppo04141 Protein processing in endoplasmic reticulum 2
ppo03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 6
ppo03010 Ribosome 3
ppo03060 Protein export 2
ppo03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
mtr04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi03008 Ribosome biogenesis in eukaryotes 2
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 5
bna04075 Plant hormone signal transduction 3
bna04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 3
cit03083 Polycomb repressive complex 2
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04814 Motor proteins 5
zma04145 Phagosome 4
zma04517 IgSF CAM signaling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01200 Carbon metabolism 3
zma00270 Cysteine and methionine metabolism 3
zma00670 One carbon pool by folate 3
zma00450 Selenocompound metabolism 2
zma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00510 N-Glycan biosynthesis 4
tae04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00520 Amino sugar and nucleotide sugar metabolism 3
hvu01250 Biosynthesis of nucleotide sugars 3
hvu04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00520 Amino sugar and nucleotide sugar metabolism 6
bdi01250 Biosynthesis of nucleotide sugars 6
bdi00040 Pentose and glucuronate interconversions 2
bdi00053 Ascorbate and aldarate metabolism 2
bdi00541 Biosynthesis of various nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 4
bdi04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101261300 101266991 101250146 102604022 102585812 102601027 107760966 107818908 107763511 816605 818594 824352 100813474 100788673 100820255 103846752 103866986 103842584 100248438 100854215 7466063 7488013 7490332 11421620 25493188 107929283 107960000 121212704 106368789 106391573 106420762 102626898 102611533 4337419 4342159 100277113 113475843 100216721 123149908 123164928 123191067 123428331 123407289 8076473 8069249 100829679 100825998
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