ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sly-m.5	101261333	uncharacterized LOC101261333
sly-u.5	101258216	uncharacterized LOC101258216
sly-u.5	101262186	uncharacterized LOC101262186
sly-u.5	101262893	uncharacterized LOC101262893
sot-r.1	102591144	post-GPI attachment to proteins factor 3-like
sot-r.1	102577513	Per1-like family protein
sot-r.1	102585916	post-GPI attachment to proteins factor 3-like
nta-r.1	107791510	post-GPI attachment to proteins factor 3-like
ath-u.5	AT5G62130	Per1-like family protein
ath-u.5	AT1G16560	Per1-like family protein
gma-u.5	100781150	post-GPI attachment to proteins factor 3
gma-u.5	100796606	post-GPI attachment to proteins factor 3
gma-u.5	100788911	post-GPI attachment to proteins factor 3
bra-r.6	103842843	post-GPI attachment to proteins factor 3
vvi-u.5	100244118	uncharacterized LOC100244118
vvi-u.5	100267589	uncharacterized LOC100267589
ppo-u.5	7462571	uncharacterized LOC7462571
ppo-u.5	7482151	uncharacterized LOC7482151
ppo-u.5	7474013	uncharacterized LOC7474013
mtr-u.5	25497238	post-GPI attachment to proteins factor 3
mtr-u.5	11417291	post-GPI attachment to proteins factor 3
ghi-r.1	107912933	post-GPI attachment to proteins factor 3
ghi-r.1	107920355	post-GPI attachment to proteins factor 3
bna-r.1	106427269	post-GPI attachment to proteins factor 3
bna-r.1	106379013	post-GPI attachment to proteins factor 3-like
cit-r.1	102615370	uncharacterized LOC102615370
cit-r.1	102617917	uncharacterized LOC102617917
osa-u.5	4349159	uncharacterized LOC4349159
osa-u.5	4338126	uncharacterized LOC4338126
zma-u.5	100281582	CAB2
zma-u.5	100274414	uncharacterized LOC100274414
zma-u.5	100274102	Per1-like family protein
tae-r.2	123093814	post-GPI attachment to proteins factor 3
tae-r.2	123114201	post-GPI attachment to proteins factor 3
tae-r.2	123087739	post-GPI attachment to proteins factor 3
hvu-r.1	123450018	post-GPI attachment to proteins factor 3-like
hvu-r.1	123449908	post-GPI attachment to proteins factor 3-like
hvu-r.1	123394962	post-GPI attachment to proteins factor 3-like
sbi-r.1	8058683	post-GPI attachment to proteins factor 3
sbi-r.1	8077984	post-GPI attachment to proteins factor 3
sbi-r.1	110430303	post-GPI attachment to proteins factor 3-like
bdi-r.1	100832838	post-GPI attachment to proteins factor 3
bdi-r.1	100821859	post-GPI attachment to proteins factor 3
cre-r.1	CHLRE_02g074050v5	uncharacterized protein

Top 50 coexpressed genes to 101261333 (sly-m.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 101261333 (sly-m.5 coexpression data)

CoexMap"101261333"

[Cytoscape]

Annotation

functional annotation

KEGG

sly00563 [list] [network] Glycosylphosphatidylinositol (GPI)-anchor biosynthesis (34 genes)

GO BP

GO:0006506 [list] [network] GPI anchor biosynthetic process

(30 genes)

IEA

GO CC

GO:0005789 [list] [network] endoplasmic reticulum membrane

(235 genes)

IEA

GO MF

GO:0016788 [list] [network] hydrolase activity, acting on ester bonds

(1067 genes)

IEA

Protein

XP_004240259.1 [sequence] [blastp]

Subcellular
localization
wolf

plas 6, vacu 1, E.R. 1, E.R._vacu 1

(predict for XP_004240259.1)

Subcellular
localization
TargetP

scret 9

(predict for XP_004240259.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sly-m.5 for 101261333	sly-u.5 for 101258216	sly-u.5 for 101262186	sly-u.5 for 101262893	sot-r.1 for 102591144	sot-r.1 for 102577513	sot-r.1 for 102585916	nta-r.1 for 107791510	ath-u.5 for AT5G62130	ath-u.5 for AT1G16560	gma-u.5 for 100781150	gma-u.5 for 100796606	gma-u.5 for 100788911	bra-r.6 for 103842843	vvi-u.5 for 100244118	vvi-u.5 for 100267589	ppo-u.5 for 7462571	ppo-u.5 for 7482151	ppo-u.5 for 7474013	mtr-u.5 for 25497238	mtr-u.5 for 11417291	ghi-r.1 for 107912933	ghi-r.1 for 107920355	bna-r.1 for 106427269	bna-r.1 for 106379013	cit-r.1 for 102615370	cit-r.1 for 102617917	osa-u.5 for 4349159	osa-u.5 for 4338126	zma-u.5 for 100281582	zma-u.5 for 100274414	zma-u.5 for 100274102	tae-r.2 for 123093814	tae-r.2 for 123114201	tae-r.2 for 123087739	hvu-r.1 for 123450018	hvu-r.1 for 123449908	hvu-r.1 for 123394962	sbi-r.1 for 8058683	sbi-r.1 for 8077984	sbi-r.1 for 110430303	bdi-r.1 for 100832838	bdi-r.1 for 100821859	cre-r.1 for CHLRE_02g074050v5

Ortholog

Ortholog ID: 1134

Species

sly

sot

nta

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

uncharacterized LOC101262186

uncharacterized LOC101262893

Per1-like family protein

post-GPI attachment to proteins factor 3-like

uncharacterized LOC107766819

uncharacterized LOC107786502

Per1-like family protein

post-GPI attachment to proteins factor 3

uncharacterized LOC100244118

uncharacterized LOC100267589

uncharacterized LOC7462571

uncharacterized LOC7482151

uncharacterized LOC7474013

post-GPI attachment to proteins factor 3

post-GPI attachment to proteins factor 3-like

post-GPI attachment to proteins factor 3

uncharacterized LOC102615370

uncharacterized LOC102617917

uncharacterized LOC4349159

uncharacterized LOC4338126

uncharacterized LOC100274414

Per1-like family protein

post-GPI attachment to proteins factor 3

post-GPI attachment to proteins factor 3-like

post-GPI attachment to proteins factor 3

post-GPI attachment to proteins factor 3-like

post-GPI attachment to proteins factor 3

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly01200	Carbon metabolism	2
sly00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	7
sot00510	N-Glycan biosynthesis	7
sot00513	Various types of N-glycan biosynthesis	7
sot04141	Protein processing in endoplasmic reticulum	7
sot04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04712	Circadian rhythm - plant	4
nta04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	2
nta00190	Oxidative phosphorylation	2
nta04142	Lysosome	2
nta04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04141	Protein processing in endoplasmic reticulum	7
ath00510	N-Glycan biosynthesis	6
ath00513	Various types of N-glycan biosynthesis	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	6
gma00010	Glycolysis / Gluconeogenesis	2
gma00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	2
gma04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04016	MAPK signaling pathway - plant	2
bra04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00020	Citrate cycle (TCA cycle)	3
vvi01200	Carbon metabolism	3
vvi03050	Proteasome	3
vvi01210	2-Oxocarboxylic acid metabolism	2
vvi01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00010	Glycolysis / Gluconeogenesis	6
ppo01230	Biosynthesis of amino acids	6
ppo01200	Carbon metabolism	5
ppo00030	Pentose phosphate pathway	4
ppo00051	Fructose and mannose metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo01200	Carbon metabolism	2
ppo01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00240	Pyrimidine metabolism	2
mtr01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00190	Oxidative phosphorylation	2
cit04145	Phagosome	2
cit00510	N-Glycan biosynthesis	2
cit00513	Various types of N-glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03013	Nucleocytoplasmic transport	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04075	Plant hormone signal transduction	3
osa04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03015	mRNA surveillance pathway	2
osa04382	Cornified envelope formation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	3
tae01240	Biosynthesis of cofactors	3
tae00750	Vitamin B6 metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	7
tae00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	3
tae03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu01240	Biosynthesis of cofactors	3
hvu03013	Nucleocytoplasmic transport	3
hvu00240	Pyrimidine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04142	Lysosome	2
hvu04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04141	Protein processing in endoplasmic reticulum	4
sbi04814	Motor proteins	2
sbi00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	2
sbi00600	Sphingolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03050	Proteasome	3
sbi00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	2
sbi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04141	Protein processing in endoplasmic reticulum	7
bdi00510	N-Glycan biosynthesis	3
bdi00513	Various types of N-glycan biosynthesis	3
bdi03060	Protein export	2
bdi04145	Phagosome	2

Expression

Expression pattern

Entrez Gene ID^*

101262186

101262893

102577513

102585916

102601881

107766819

107786502

836333

838226

100781150

100793147

103842843

103874651

100244118

100267589

7462571

7482151

7474013

25497238

11417291

107922709

107947277

106379013

106346760

102615370

102617917

4349159

4338126

100274414

100274102

100273324

123093814

123149608

123166219

123450018

123449908

123394962

8058683

8077984

110430303

100832838

100821859

5727171

The preparation time of this page was 0.1 [sec].


Species	sly	sot	nta	ath	gma	bra	vvi	ppo	mtr	ghi	bna	cit	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	3	1	2	3	1	2	3	2	2	2	2	2	3	3	3	3	2	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 101261333 (sly-m.5 coexpression data)

Top 50 enrichment test to 101261333 (sly-m.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**