Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101262193   transcription termination factor MTERF2, chloroplastic 
 sly-r.6   101262193   transcription termination factor MTERF2, chloroplastic 
 ath-u.5   AT1G78930   Mitochondrial transcription termination factor family protein 
 gma-u.5   100802127   transcription termination factor MTERF2, chloroplastic 
 vvi-u.5   100244378   transcription termination factor MTERF2, chloroplastic 
 ppo-u.5   7465582   transcription termination factor MTERF2, chloroplastic 
 mtr-u.5   25495073   transcription termination factor MTEF1, chloroplastic 
 zma-u.5   103644366   uncharacterized LOC103644366 
 zma-u.5   100383444   uncharacterized LOC100383444 

close


Top 50 coexpressed genes to 101262193 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 101262193 (sly-u.5 coexpression data)

CoexMap"101262193"


slyLOC101262193 | Entrez gene ID : 101262193    
Species sly ath gma vvi ppo mtr zma bdi hvu bra cit bna sbi ghi osa sot nta cre tae
Paralog 2 1 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1608 genes)  IEA  
GO CC
GO MF
GO:0003690 [list] [network] double-stranded DNA binding  (545 genes)  IEA  
Protein XP_004235498.1 [sequence] [blastp]
XP_010318421.1 [sequence] [blastp]
XP_010318422.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  nucl 1,  mito 1,  plas 1,  E.R. 1,  nucl_plas 1,  E.R._plas 1,  mito_plas 1  (predict for XP_004235498.1)
chlo 7,  nucl 1,  mito 1,  extr 1,  E.R. 1  (predict for XP_010318421.1)
chlo 6,  nucl 1,  mito 1,  plas 1,  E.R. 1,  cyto_nucl 1,  cysk_nucl 1,  E.R._plas 1,  mito_plas 1  (predict for XP_010318422.1)
Subcellular
localization
TargetP
scret 4,  chlo 4  (predict for XP_004235498.1)
scret 4,  chlo 4  (predict for XP_010318421.1)
scret 4,  chlo 4  (predict for XP_010318422.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101262193
sly-r.6
for
101262193
ath-u.5
for
AT1G78930
gma-u.5
for
100802127
vvi-u.5
for
100244378
ppo-u.5
for
7465582
mtr-u.5
for
25495073
zma-u.5
for
103644366
zma-u.5
for
100383444


Ortholog ID: 10561
Species sly sot nta nta ath gma bra vvi ppo mtr ghi ghi cit zma zma tae tae hvu sbi bdi
Symbol LOC101262193 LOC102600438 LOC142180247 LOC107769271 AT1G78930 LOC100802127 LOC103832370 LOC100244378 LOC7465582 LOC25495073 LOC107901769 LOC107963495 LOC102616438 LOC103644366 LOC100383444 LOC123104819 LOC123113104 LOC123397104 LOC8077262 LOC100838727
Function* transcription termination factor MTERF2, chloroplastic uncharacterized LOC102600438 uncharacterized LOC142180247 uncharacterized LOC107769271 Mitochondrial transcription termination factor family protein transcription termination factor MTERF2, chloroplastic transcription termination factor MTERF2, chloroplastic transcription termination factor MTERF2, chloroplastic transcription termination factor MTERF2, chloroplastic transcription termination factor MTEF1, chloroplastic transcription termination factor MTERF2, chloroplastic transcription termination factor MTERF6, chloroplastic/mitochondrial transcription termination factor MTERF2, chloroplastic uncharacterized LOC103644366 uncharacterized LOC100383444 transcription termination factor MTERF2, chloroplastic transcription termination factor MTERF2, chloroplastic transcription termination factor MTERF2, chloroplastic transcription termination factor MTERF2, chloroplastic transcription termination factor MTERF2, chloroplastic
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 3
sly00260 Glycine, serine and threonine metabolism 2
sly00460 Cyanoamino acid metabolism 2
sly00630 Glyoxylate and dicarboxylate metabolism 2
sly00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00220 Arginine biosynthesis 3
nta00240 Pyrimidine metabolism 3
nta00250 Alanine, aspartate and glutamate metabolism 3
nta01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00220 Arginine biosynthesis 3
nta00240 Pyrimidine metabolism 3
nta00250 Alanine, aspartate and glutamate metabolism 3
nta01240 Biosynthesis of cofactors 3
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 2
ath03410 Base excision repair 2
ath03420 Nucleotide excision repair 2
ath03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03030 DNA replication 2
bra03410 Base excision repair 2
bra03420 Nucleotide excision repair 2
bra03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 6
ghi03015 mRNA surveillance pathway 2
ghi04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 5
ghi00230 Purine metabolism 2
ghi00740 Riboflavin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101262193 102600438 142180247 107769271 844232 100802127 103832370 100244378 7465582 25495073 107901769 107963495 102616438 103644366 100383444 123104819 123113104 123397104 8077262 100838727
The preparation time of this page was 0.1 [sec].