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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101262682   probable prolyl 4-hydroxylase 6 
 sly-r.6   101262682   probable prolyl 4-hydroxylase 6 
 sly-m.5   101262682   probable prolyl 4-hydroxylase 6 
 sot-r.1   102581670   probable prolyl 4-hydroxylase 6 
 nta-r.1   107776929   probable prolyl 4-hydroxylase 6 
 nta-r.1   107769382   putative prolyl 4-hydroxylase 6 
 ath-u.5   AT3G28480   Oxoglutarate/iron-dependent oxygenase 
 gma-u.5   100819289   probable prolyl 4-hydroxylase 7 
 gma-u.5   100805097   probable prolyl 4-hydroxylase 7 
 bra-r.6   103875148   probable prolyl 4-hydroxylase 7 
 bra-r.6   103837019   probable prolyl 4-hydroxylase 7 
 vvi-u.5   100242241   probable prolyl 4-hydroxylase 6 
 ppo-u.5   7495938   probable prolyl 4-hydroxylase 7 
 mtr-u.5   11434433   probable prolyl 4-hydroxylase 7 
 ghi-r.1   107911792   probable prolyl 4-hydroxylase 7 
 ghi-r.1   107924304   probable prolyl 4-hydroxylase 7 
 ghi-r.1   107959805   probable prolyl 4-hydroxylase 7 
 bna-r.1   106411593   probable prolyl 4-hydroxylase 7 
 bna-r.1   106391422   probable prolyl 4-hydroxylase 7 
 bna-r.1   106390229   probable prolyl 4-hydroxylase 7 
 cit-r.1   102612484   probable prolyl 4-hydroxylase 6 
 osa-u.5   107280232   probable prolyl 4-hydroxylase 4 
 osa-u.5   4342642   probable prolyl 4-hydroxylase 6 
 osa-u.5   4334477   probable prolyl 4-hydroxylase 6 
 zma-u.5   100274058   putative prolyl 4-hydroxylase 12 
 zma-u.5   100383727   prolyl 4-hydroxylase 2 
 zma-u.5   100272381   uncharacterized LOC100272381 
 tae-r.2   123113799   probable prolyl 4-hydroxylase 7 
 tae-r.2   123044053   probable prolyl 4-hydroxylase 7 
 tae-r.2   123108080   probable prolyl 4-hydroxylase 6 
 hvu-r.1   123428378   probable prolyl 4-hydroxylase 7 
 hvu-r.1   123452821   probable prolyl 4-hydroxylase 7 
 sbi-r.1   8061140   probable prolyl 4-hydroxylase 7 
 sbi-r.1   8064925   probable prolyl 4-hydroxylase 7 
 sbi-r.1   8075083   probable prolyl 4-hydroxylase 6 
 bdi-r.1   100834813   probable prolyl 4-hydroxylase 7 
 bdi-r.1   100831521   probable prolyl 4-hydroxylase 6 
 cre-r.1   CHLRE_03g160200v5   uncharacterized protein 
 cre-r.1   CHLRE_08g369300v5   uncharacterized protein 

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Top 50 coexpressed genes to 101262682 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101262682 (sly-u.5 coexpression data)

CoexMap"101262682"


slyLOC101262682 | Entrez gene ID : 101262682      
Species sly sot nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 3 1 2 1 2 2 1 1 1 3 3 1 3 3 3 2 3 2 2
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly00330 [list] [network] Arginine and proline metabolism (64 genes)
GO BP
GO:0018401 [list] [network] peptidyl-proline hydroxylation to 4-hydroxy-L-proline  (12 genes)  IEA  
GO CC
GO:0005783 [list] [network] endoplasmic reticulum  (509 genes)  IEA  
GO MF
GO:0004656 [list] [network] procollagen-proline 4-dioxygenase activity  (12 genes)  IEA  
GO:0031418 [list] [network] L-ascorbic acid binding  (16 genes)  IEA  
GO:0005506 [list] [network] iron ion binding  (371 genes)  IEA  
Protein XP_004233344.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  vacu 2,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for XP_004233344.1)
Subcellular
localization
TargetP
scret 7  (predict for XP_004233344.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101262682
sly-r.6
for
101262682
sly-m.5
for
101262682
sot-r.1
for
102581670
nta-r.1
for
107776929
nta-r.1
for
107769382
ath-u.5
for
AT3G28480
gma-u.5
for
100819289
gma-u.5
for
100805097
bra-r.6
for
103875148
bra-r.6
for
103837019
vvi-u.5
for
100242241
ppo-u.5
for
7495938
mtr-u.5
for
11434433
ghi-r.1
for
107911792
ghi-r.1
for
107924304
ghi-r.1
for
107959805
bna-r.1
for
106411593
bna-r.1
for
106391422
bna-r.1
for
106390229
cit-r.1
for
102612484
osa-u.5
for
107280232
osa-u.5
for
4342642
osa-u.5
for
4334477
zma-u.5
for
100274058
zma-u.5
for
100383727
zma-u.5
for
100272381
tae-r.2
for
123113799
tae-r.2
for
123044053
tae-r.2
for
123108080
hvu-r.1
for
123428378
hvu-r.1
for
123452821
sbi-r.1
for
8061140
sbi-r.1
for
8064925
sbi-r.1
for
8075083
bdi-r.1
for
100834813
bdi-r.1
for
100831521
cre-r.1
for
CHLRE_03g160200v5
cre-r.1
for
CHLRE_08g369300v5


Ortholog ID: 3810
Species sly sot nta nta ath gma gma bra bra vvi ppo mtr ghi ghi ghi bna bna bna cit osa osa osa zma zma zma tae tae tae hvu hvu sbi sbi sbi bdi bdi cre cre
Symbol LOC101262682 LOC102581670 LOC107776929 LOC107769382 AT3G28480 LOC100819289 LOC100805097 LOC103875148 LOC103837019 LOC100242241 LOC7495938 LOC11434433 LOC107911792 LOC107924304 LOC107939077 LOC106411593 LOC106391422 LOC106397251 LOC102612484 LOC107280232 LOC4342642 LOC4334477 LOC100274058 LOC100383727 LOC100193935 LOC123113799 LOC123180842 LOC123123298 LOC123428378 LOC123452821 LOC8061140 LOC8064925 LOC8075083 LOC100834813 LOC100831521 CHLRE_03g160200v5 CHLRE_08g369300v5
Function* probable prolyl 4-hydroxylase 6 probable prolyl 4-hydroxylase 6 probable prolyl 4-hydroxylase 6 putative prolyl 4-hydroxylase 6 Oxoglutarate/iron-dependent oxygenase probable prolyl 4-hydroxylase 7 probable prolyl 4-hydroxylase 7 probable prolyl 4-hydroxylase 7 probable prolyl 4-hydroxylase 7 probable prolyl 4-hydroxylase 6 probable prolyl 4-hydroxylase 7 probable prolyl 4-hydroxylase 7 probable prolyl 4-hydroxylase 7 probable prolyl 4-hydroxylase 7 probable prolyl 4-hydroxylase 7 probable prolyl 4-hydroxylase 7 probable prolyl 4-hydroxylase 7 probable prolyl 4-hydroxylase 7 probable prolyl 4-hydroxylase 6 probable prolyl 4-hydroxylase 4 probable prolyl 4-hydroxylase 6 probable prolyl 4-hydroxylase 6 putative prolyl 4-hydroxylase 12 prolyl 4-hydroxylase 2 uncharacterized LOC100193935 probable prolyl 4-hydroxylase 7 probable prolyl 4-hydroxylase 7 probable prolyl 4-hydroxylase 7 probable prolyl 4-hydroxylase 7 probable prolyl 4-hydroxylase 7 probable prolyl 4-hydroxylase 7 probable prolyl 4-hydroxylase 7 probable prolyl 4-hydroxylase 6 probable prolyl 4-hydroxylase 7 probable prolyl 4-hydroxylase 6 uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00900 Terpenoid backbone biosynthesis 2
nta00330 Arginine and proline metabolism 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00330 Arginine and proline metabolism 2
nta00053 Ascorbate and aldarate metabolism 2
nta00480 Glutathione metabolism 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04626 Plant-pathogen interaction 3
ath04016 MAPK signaling pathway - plant 2
ath00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00010 Glycolysis / Gluconeogenesis 5
gma01230 Biosynthesis of amino acids 5
gma01200 Carbon metabolism 4
gma00330 Arginine and proline metabolism 3
gma00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 6
gma00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 4
bra03060 Protein export 3
bra04145 Phagosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03060 Protein export 3
bra00190 Oxidative phosphorylation 2
bra04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01200 Carbon metabolism 4
vvi00010 Glycolysis / Gluconeogenesis 3
vvi00710 Carbon fixation by Calvin cycle 3
vvi01230 Biosynthesis of amino acids 3
vvi00330 Arginine and proline metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 4
ppo01230 Biosynthesis of amino acids 4
ppo00010 Glycolysis / Gluconeogenesis 4
ppo00330 Arginine and proline metabolism 3
ppo00710 Carbon fixation by Calvin cycle 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00220 Arginine biosynthesis 2
mtr00250 Alanine, aspartate and glutamate metabolism 2
mtr00710 Carbon fixation by Calvin cycle 2
mtr01200 Carbon metabolism 2
mtr01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00330 Arginine and proline metabolism 6
ghi03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00330 Arginine and proline metabolism 6
ghi03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00330 Arginine and proline metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00330 Arginine and proline metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00330 Arginine and proline metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 8
cit01230 Biosynthesis of amino acids 8
cit00010 Glycolysis / Gluconeogenesis 7
cit00710 Carbon fixation by Calvin cycle 5
cit00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00330 Arginine and proline metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00330 Arginine and proline metabolism 2
osa00010 Glycolysis / Gluconeogenesis 2
osa00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
osa00940 Phenylpropanoid biosynthesis 2
osa00941 Flavonoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04146 Peroxisome 3
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00330 Arginine and proline metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 3
tae00190 Oxidative phosphorylation 3
tae00330 Arginine and proline metabolism 3
tae03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00010 Glycolysis / Gluconeogenesis 4
tae00071 Fatty acid degradation 4
tae00350 Tyrosine metabolism 4
tae00592 alpha-Linolenic acid metabolism 4
tae00620 Pyruvate metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00010 Glycolysis / Gluconeogenesis 5
sbi00330 Arginine and proline metabolism 2
sbi00030 Pentose phosphate pathway 2
sbi00051 Fructose and mannose metabolism 2
sbi00052 Galactose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 5
sbi04130 SNARE interactions in vesicular transport 2
sbi03083 Polycomb repressive complex 2
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00010 Glycolysis / Gluconeogenesis 5
sbi00330 Arginine and proline metabolism 2
sbi00030 Pentose phosphate pathway 2
sbi00051 Fructose and mannose metabolism 2
sbi00052 Galactose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04144 Endocytosis 2
bdi04120 Ubiquitin mediated proteolysis 2
bdi04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00010 Glycolysis / Gluconeogenesis 2
bdi00330 Arginine and proline metabolism 2
bdi00940 Phenylpropanoid biosynthesis 2
bdi00941 Flavonoid biosynthesis 2
bdi00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00330 Arginine and proline metabolism 4
cre04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101262682 102581670 107776929 107769382 822478 100819289 100805097 103875148 103837019 100242241 7495938 11434433 107911792 107924304 107939077 106411593 106391422 106397251 102612484 107280232 4342642 4334477 100274058 100383727 100193935 123113799 123180842 123123298 123428378 123452821 8061140 8064925 8075083 100834813 100831521 5722993 5721719
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