Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101263192   DEAD-box ATP-dependent RNA helicase 37-like 
 sly-r.6   101263192   DEAD-box ATP-dependent RNA helicase 37-like 
 sly-m.5   101263192   DEAD-box ATP-dependent RNA helicase 37-like 
 sly-u.5   101244218   DEAD-box ATP-dependent RNA helicase 37 
 ath-u.5   AT2G42520   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 ath-u.5   AT3G58510   DEA(D/H)-box RNA helicase family protein 
 ath-u.5   AT3G58570   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 gma-u.5   100781668   DEAD-box ATP-dependent RNA helicase 52C 
 gma-u.5   100781743   DEAD-box ATP-dependent RNA helicase 37 
 gma-u.5   100784557   DEAD-box ATP-dependent RNA helicase 52C 
 vvi-u.5   100245822   DEAD-box ATP-dependent RNA helicase 52C 
 vvi-u.5   100250155   DEAD-box ATP-dependent RNA helicase 37-like 
 vvi-u.5   100240950   DEAD-box ATP-dependent RNA helicase 37 
 ppo-u.5   7488045   DEAD-box ATP-dependent RNA helicase 37 
 ppo-u.5   7479507   DEAD-box ATP-dependent RNA helicase 37-like 
 ppo-u.5   7463584   DEAD-box ATP-dependent RNA helicase 37 
 mtr-u.5   11427011   DEAD-box ATP-dependent RNA helicase 52C 
 mtr-u.5   25483582   DEAD-box ATP-dependent RNA helicase 37 
 mtr-u.5   11443667   DEAD-box ATP-dependent RNA helicase 52B 
 osa-u.5   4350856   DEAD-box ATP-dependent RNA helicase 52C 
 osa-u.5   4342669   DEAD-box ATP-dependent RNA helicase 52B-like 
 osa-u.5   4341457   DEAD-box ATP-dependent RNA helicase 52A-like 
 zma-u.5   100501699   uncharacterized LOC100501699 
 zma-u.5   100381785   uncharacterized LOC100381785 
 zma-u.5   100279527   putative DEAD-box ATP-dependent RNA helicase family protein 

close


Top 50 coexpressed genes to 101263192 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 101263192 (sly-u.5 coexpression data)

CoexMap"101263192"


slyLOC101263192 | Entrez gene ID : 101263192      
Species sly ath gma vvi ppo mtr osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 3 3 3 3 3 3 3 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (2947 genes)  IEA  
GO MF
GO:0003724 [list] [network] RNA helicase activity  (68 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1208 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (1916 genes)  IEA  
Protein XP_004234756.2 [sequence] [blastp]
XP_019068403.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  mito 2,  cysk_nucl 2,  nucl_plas 2  (predict for XP_004234756.2)
nucl 4,  chlo 1,  cyto 1,  mito 1,  pero 1,  chlo_mito 1,  cyto_pero 1  (predict for XP_019068403.2)
Subcellular
localization
TargetP
chlo 8,  other 3  (predict for XP_004234756.2)
chlo 8,  other 3  (predict for XP_019068403.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101263192

.
sly-r.6
for
101263192

.
sly-m.5
for
101263192

.
sly-u.5
for
101244218

.
ath-u.5
for
AT2G42520

.
ath-u.5
for
AT3G58510

.
ath-u.5
for
AT3G58570

.
gma-u.5
for
100781668

.
gma-u.5
for
100781743

.
gma-u.5
for
100784557

.
vvi-u.5
for
100245822

.
vvi-u.5
for
100250155

.
vvi-u.5
for
100240950

.
ppo-u.5
for
7488045

.
ppo-u.5
for
7479507

.
ppo-u.5
for
7463584

.
mtr-u.5
for
11427011

.
mtr-u.5
for
25483582

.
mtr-u.5
for
11443667

.
osa-u.5
for
4350856

.
osa-u.5
for
4342669

.
osa-u.5
for
4341457

.
zma-u.5
for
100501699

.
zma-u.5
for
100381785

.
zma-u.5
for
100279527

.


Ortholog ID: 1144
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sot sot cit cit bdi bdi nta nta
Symbol AT2G42520 AT3G58510 LOC100800039 LOC100781668 LOC101244218 LOC101263192 LOC4350856 LOC4342669 LOC100381785 LOC100501699 LOC103865954 LOC103830164 LOC100250155 LOC100240950 LOC7488045 LOC7463584 LOC25483582 LOC11427011 LOC123085867 LOC123113829 LOC123448365 LOC123452849 LOC107922187 LOC121204761 LOC106368273 LOC106353186 CHLRE_10g427700v5 LOC110432556 LOC102596159 LOC102604430 LOC102614023 LOC102613246 LOC100829994 LOC104581299 LOC107793153 LOC107773699
Function* P-loop containing nucleoside triphosphate hydrolases superfamily protein DEA(D/H)-box RNA helicase family protein DEAD-box ATP-dependent RNA helicase 37 DEAD-box ATP-dependent RNA helicase 52C DEAD-box ATP-dependent RNA helicase 37 DEAD-box ATP-dependent RNA helicase 37-like DEAD-box ATP-dependent RNA helicase 52C DEAD-box ATP-dependent RNA helicase 52B-like uncharacterized LOC100381785 uncharacterized LOC100501699 DEAD-box ATP-dependent RNA helicase 37 DEAD-box ATP-dependent RNA helicase 11 DEAD-box ATP-dependent RNA helicase 37-like DEAD-box ATP-dependent RNA helicase 37 DEAD-box ATP-dependent RNA helicase 37 DEAD-box ATP-dependent RNA helicase 37 DEAD-box ATP-dependent RNA helicase 37 DEAD-box ATP-dependent RNA helicase 52C DEAD-box ATP-dependent RNA helicase 52C DEAD-box ATP-dependent RNA helicase 37 DEAD-box ATP-dependent RNA helicase 52C-like DEAD-box ATP-dependent RNA helicase 37-like DEAD-box ATP-dependent RNA helicase 37 DEAD-box ATP-dependent RNA helicase 52C DEAD-box ATP-dependent RNA helicase 11 DEAD-box ATP-dependent RNA helicase 52 uncharacterized protein DEAD-box ATP-dependent RNA helicase 52B-like DEAD-box ATP-dependent RNA helicase 37-like DEAD-box ATP-dependent RNA helicase 11-like DEAD-box ATP-dependent RNA helicase 37-like DEAD-box ATP-dependent RNA helicase 37-like DEAD-box ATP-dependent RNA helicase 37 DEAD-box ATP-dependent RNA helicase 52A DEAD-box ATP-dependent RNA helicase 11 DEAD-box ATP-dependent RNA helicase 37
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 4
ath03250 Viral life cycle - HIV-1 2
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 3
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 5
gma00510 N-Glycan biosynthesis 2
gma00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 4
gma03250 Viral life cycle - HIV-1 4
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 3
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03018 RNA degradation 3
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 2
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04626 Plant-pathogen interaction 3
zma00100 Steroid biosynthesis 2
zma00564 Glycerophospholipid metabolism 2
zma04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 3
zma04120 Ubiquitin mediated proteolysis 2
zma03015 mRNA surveillance pathway 2
zma04382 Cornified envelope formation 2
zma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 2
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00500 Starch and sucrose metabolism 3
vvi01240 Biosynthesis of cofactors 2
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 5
ppo00510 N-Glycan biosynthesis 2
ppo01200 Carbon metabolism 2
ppo01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 3
ppo04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04142 Lysosome 3
mtr04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 5
mtr01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 3
tae04142 Lysosome 2
tae04144 Endocytosis 2
tae05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 6
tae03018 RNA degradation 3
tae03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 3
hvu00510 N-Glycan biosynthesis 2
hvu00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 3
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00970 Aminoacyl-tRNA biosynthesis 3
cre03013 Nucleocytoplasmic transport 2
cre01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 5
bdi04141 Protein processing in endoplasmic reticulum 3
bdi03015 mRNA surveillance pathway 2
bdi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00592 alpha-Linolenic acid metabolism 3
nta03015 mRNA surveillance pathway 2
nta03040 Spliceosome 2
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
nta03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 818852 825020 100800039 100781668 101244218 101263192 4350856 4342669 100381785 100501699 103865954 103830164 100250155 100240950 7488045 7463584 25483582 11427011 123085867 123113829 123448365 123452849 107922187 121204761 106368273 106353186 5728159 110432556 102596159 102604430 102614023 102613246 100829994 104581299 107793153 107773699
The preparation time of this page was 0.1 [sec].